Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_028784.1 Length=51409 Score E Sequences producing significant alignments: (Bits) Value seq117 145 3e-30 >seq117 Length=8551 Score = 145 bits (160), Expect = 3e-30 Identities = 183/245 (75%), Gaps = 10/245 (4%) Strand=Plus/Minus Query 41670 GGATTTTGGGAACCCGCTGCCGTAGAGCCACGCGATCGAGTCGCGGATCTCGAAGCCCGC 41729 ||| || ||||| || ||||| ||||| |||| |||||||| || ||||| || || Sbjct 7950 GGACTTCGGGAATCCTGACCCGTATAGCCAGGCGAGGGAGTCGCGCATTTCGAATCCTGC 7891 Query 41730 GTCCTCGATGGCCACGGTCAGCCGGTGCCAGGTGCGGGAGCCGCCGAAGGCGAGCAGGTG 41789 ||| |||||||| |||| || |||||||||||||||| ||| ||||| ||| | ||| Sbjct 7890 GTCTTCGATGGCGACGGCGAGGCGGTGCCAGGTGCGGGTGCCACCGAAAGCGGCGATGTG 7831 Query 41790 CCCACCGGGCTTGAGGACCCGCAGGCATTGCTCC--CACATCTCGACATCGAAAGCGATG 41847 |||||||||||||| ||||| ||| ||| | | ||| || || || || | Sbjct 7830 TCCACCGGGCTTGAGTACCCGGTAGCA-CGCTTCGGCCCAT-TC--CAGTGA---CGGGG 7778 Query 41848 CCCGAGCCGTCCCACTTCTTGCCCATGAATCCCAGCTCATAGGGCGGGTCTGTGAGAATT 41907 | ||||||||| |||||||||||||| || || | ||||||||||| |||| ||| Sbjct 7777 GAAG-GCCGTCCCATTTCTTGCCCATGAAGCCGAGGCCGTAGGGCGGGTCGGTGACGATT 7719 Query 41908 GCATC 41912 || || Sbjct 7718 GCGTC 7714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164385823770910