Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_028791.1 Length=44492 Score E Sequences producing significant alignments: (Bits) Value seq334 196 1e-45 >seq334 Length=7771 Score = 196 bits (216), Expect = 1e-45 Identities = 322/459 (70%), Gaps = 13/459 (3%) Strand=Plus/Minus Query 900 CGGATTCTGTTCGGCGCGCGTGAGCACGGTTTCGGTCTGGGTTTCGCCGGCGTCGGTGTC 959 || ||| |||| || || || ||| || ||||||| || ||||| || | || Sbjct 7135 CGCATTTTGTTTGGTGCTCGCGAGTCTGGCTTCGGTCGTGGGTTCGCGAAGGTGGACGTG 7076 Query 960 CTGGTGCTCGACGAGGCGCAGCGCGTCACGACGCAGGCCATGGACGACCTGATCCCGACG 1019 ||| | |||| ||||||||| | ||||| | |||||||||| ||| || | ||| | Sbjct 7075 CTGATCTTCGATGAGGCGCAGATCCTCACGGAGAAGGCCATGGAGGACATGGTTCCGGCA 7016 Query 1020 ATGAACACGGTCGCGAATCCGCTGGTGCTGATGACGGGCACACCGCCGCGGCCGAACGAC 1079 | |||| ||| | ||| |||||| | |||| ||||| || ||||| || | ||| Sbjct 7015 ACGAACGCGGCACCTAATGGTCTGGTGTTCATGATCGGCACTCCCCCGCGCCCCACGGAC 6956 Query 1080 GCCGGCGAAGTGTTCGCGATGCACCGGCAGGACGCGCTGGACGGCGAGGCCGAAGGGACG 1139 | ||||| |||||| |||||| |||| | | || ||| ||||||| | ||||| Sbjct 6955 CCGGGCGAGGTGTTCTCGATGCGCCGGGACGCGGCACTGTCGGGCGAGGACCC--GGACG 6898 Query 1140 C--TGTACGTCGAGTTCTCCGCGGACGACGGCGCGAGCCCGGACGATCGGGCGCAGCTGC 1197 ||||||| ||| | || || || | | ||||| ||||||||| || ||| | || Sbjct 6897 TGATGTACGTGGAGCTGTCGGCCGATAAGGACGCGAACCCGGACGACCGTGCGGCGTGGC 6838 Query 1198 GCAAGGCGAACCCGTCGTATCCGCACCGCACCGGCGAACGCGCGATCCGGCGGATGCGGA 1257 | |||||||||||||||| |||||||| || || || |||||||| ||| ||||||| Sbjct 6837 GGAAGGCGAACCCGTCGTTCCCGCACCGGACGGGTGAGGGCGCGATCTTGCGCATGCGGA 6778 Query 1258 AGTCGCT---CACCGAAGAGTCGTTCCTACGCGAAGCGCTGGGGATCTGGGACAAGACGC 1314 || ||| | | |||||||| | || || | ||||| ||||||||| ||| || Sbjct 6777 AGCTGCTGGGGTCTGTCGAGTCGTTTCGCCGTGAGGGTCTGGGCATCTGGGACGAGAAGC 6718 Query 1315 TGC---ACCGGCCGGTGGTCACCGC--GGCGCGCTGGCG 1348 || |||| ||| | || |||| |||||| |||| Sbjct 6717 AGCGTGGCCGGTCGGCGTTC-CCGCCTGGCGCGTGGGCG 6680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 142251609077340