Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_028810.1 Length=52357 Score E Sequences producing significant alignments: (Bits) Value seq117 159 1e-34 >seq117 Length=8551 Score = 159 bits (176), Expect = 1e-34 Identities = 206/282 (73%), Gaps = 17/282 (6%) Strand=Plus/Minus Query 40265 GGCCTTGTCGATGGCTTTGGATACGTTGAGCGACTTCGGGAACCCGCTGCCGTAGAGCCA 40324 ||||| |||||| || || |||| | ||||||||||| || ||||| ||||| Sbjct 7979 GGCCT-GTCGATTGCCTTCCCCACGTCCAAGGACTTCGGGAATCCTGACCCGTATAGCCA 7921 Query 40325 CGCGATCGAGTCGCGGACCTCGAACCCGGCGTCCTCGATGGCCACGGTCAGCCGGTGCCA 40384 |||| |||||||| | ||||| || ||||| |||||||| |||| || |||||||| Sbjct 7920 GGCGAGGGAGTCGCGCATTTCGAATCCTGCGTCTTCGATGGCGACGGCGAGGCGGTGCCA 7861 Query 40385 GGTGCGGGACCCGCCGAAGGCGAGCAGGTGCCCACCGGGCTTGAGGACCCGCAGGCATTG 40444 |||||||| || ||||| ||| | ||| |||||||||||||| ||||| ||| | Sbjct 7860 GGTGCGGGTGCCACCGAAAGCGGCGATGTGTCCACCGGGCTTGAGTACCCGGTAGCA-CG 7802 Query 40445 CTCC--CACATCTC---GACGTCGAAAGCGATGCCCGAGCCGTCCCACTTCTTGCTCATG 40499 || | | ||| | |||| | ||| ||||||||| ||||||| |||| Sbjct 7801 CTTCGGCCCATTCCAGTGACGGGGGAAG----------GCCGTCCCATTTCTTGCCCATG 7752 Query 40500 AATCCCAGTTCGTAGGGCGGGTCGGTGACGATGGAGTCGACG 40541 || || || |||||||||||||||||||||| | ||| ||| Sbjct 7751 AAGCCGAGGCCGTAGGGCGGGTCGGTGACGATTGCGTCAACG 7710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 167419398373990