Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_028813.1 Length=57766 Score E Sequences producing significant alignments: (Bits) Value seq117 109 2e-19 >seq117 Length=8551 Score = 109 bits (120), Expect = 2e-19 Identities = 142/195 (73%), Gaps = 1/195 (1%) Strand=Plus/Plus Query 45490 TGGGCGGCTGAGTGCTTGCGTGTGTTGAAACCGGGCGGGCACATGTTGGCGTTCGGCGGT 45549 ||||| | | ||||| || || | || || || || ||||| || ||||| || Sbjct 7792 TGGGCCGAAGCGTGCTACCGGGTACTCAAGCCCGGTGGACACATCGCCGCTTTCGGTGGC 7851 Query 45550 TCGCGCACCTGGCACCGGCTGGCGGCGGCGATCGAGGACGCCGGGTTTGAGATCCGGGAC 45609 | |||||||||||||| || || | || ||||| ||||| || || || || || ||| Sbjct 7852 ACCCGCACCTGGCACCGCCTCGCCGTCGCCATCGAAGACGCAGGATTCGAAATGCGCGAC 7911 Query 45610 TCCATCGCGTGGCTGTACGGATCCGGGTTCCCGAAGTCGCTCGACGTTTCCAAGGCGATC 45669 ||| |||| ||||| ||||| || || ||||||||||| | ||||| ||||| ||| Sbjct 7912 TCCCTCGCCTGGCTATACGGGTCAGGATTCCCGAAGTCCTTGGACGTGGGGAAGGCAATC 7971 Query 45670 GACAAGGCCGCCGGC 45684 ||| ||||| |||| Sbjct 7972 GAC-AGGCCAACGGC 7985 Score = 86.0 bits (94), Expect = 2e-12 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 45793 GTCACCGCCCCTGCGACTGATGCGGCGCGGCAGTGGCAGGGATGGGGCACGGCGCTGAAA 45852 ||||||||||| |||||| || ||| ||||||| | || ||||||||||| || || Sbjct 8302 GTCACCGCCCCCGCGACTCCTGAGGCCGCGCAGTGGGACGGCTGGGGCACGGCTCTAAAG 8361 Query 45853 CCATCGTTTGAGCCCGTCGTGGTCGCGCGCAAGCCTCTCG 45892 || |||||||||| ||||| |||| || ||||| |||| Sbjct 8362 CCCGCGTTTGAGCCTATCGTGCTCGCCCGTAAGCCCCTCG 8401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 184728053466880