Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_028821.1 Length=40670 Score E Sequences producing significant alignments: (Bits) Value seq616 129 2e-25 >seq616 Length=17366 Score = 129 bits (142), Expect = 2e-25 Identities = 179/247 (72%), Gaps = 8/247 (3%) Strand=Plus/Plus Query 10224 ACCTTGTGCCTGACTTACATCGCGTTCTGAAAAACCTTTCGGTTGTTTTTCAATATTTTC 10283 |||||| || | ||||||||| || |||| ||||||||| || |||||||||||||| | Sbjct 6576 ACCTTGCGCTTTACTTACATCACGCTCTGTAAAACCTTTTGGCTGTTTTTCAATATTCTT 6635 Query 10284 ATTACTTCGTGCTATTTCCATTAACACGTTTATTTGTTTCTGTTGATTTTCTATCATTTG 10343 |||||| ||||| |||| |||||| | || |||||| ||||| || | ||||||| Sbjct 6636 ATTACTACGTGCGATTTGCATTAATGTATCTAATTGTTTTTGTTGGTTAGCAATCATTTC 6695 Query 10344 TAGTAGCAATTCTGCGTTATCAACTGTATTACTAGTAACACTAGGTGTACGTAATTGGTT 10403 ||||| || | ||||||| ||||| || || || || || | ||| || Sbjct 6696 TAGTAATAAAGAAGTGTTATCA---CTATTATTACTATTGGAAGATGAACTCATTTGATT 6752 Query 10404 AGGTCGTTTATTTCTGTTATTTCCACTAATTTTACTCGCAGCAAGATGTAACAA-TTTCA 10462 ||||||||| ||| | |||| | |||| ||||| || | | || | || ||||| Sbjct 6753 AGGTCGTTTGTTTTTCTTAT---CTTTAATCTTACTTTGCGC-ATACGTGATAAGTTTCA 6808 Query 10463 TCGCATC 10469 ||||||| Sbjct 6809 TCGCATC 6815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130021311468720