Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_028823.1 Length=58985 Score E Sequences producing significant alignments: (Bits) Value seq117 134 5e-27 >seq117 Length=8551 Score = 134 bits (148), Expect = 5e-27 Identities = 202/279 (72%), Gaps = 11/279 (4%) Strand=Plus/Plus Query 46569 CGTCGACGCCGTGGTTTGCGACCCACCCTACGAGCTGGAGTTCATGGGCAAGAAGTGGGA 46628 ||| ||||| | || |||||| ||||||| || | |||||||||||||| ||||| Sbjct 7710 CGTTGACGCAATCGTCACCGACCCGCCCTACGGCCTCGGCTTCATGGGCAAGAAATGGGA 7769 Query 46629 CGGCTCGGGTATCGCCTTCGACGTCGAGATGTG--GGAGCAATGTCTGCGGGTCCTCAAG 46686 |||| | | || || || | || ||| | | ||| || ||||| |||||| Sbjct 7770 CGGCC----TTCCCCCGTC-AC-TGGA-ATGGGCCGAAGCG-TGCTACCGGGTACTCAAG 7821 Query 46687 CCGGGTGGGCATTTGTTGGCCTTCGGCGGCTCCCGCACCTGGCACCGGATGACCGTGGCC 46746 || ||||| || | || ||||| ||| |||||||||||||||| | |||| ||| Sbjct 7822 CCCGGTGGACACATCGCCGCTTTCGGTGGCACCCGCACCTGGCACCGCCTCGCCGTCGCC 7881 Query 46747 ATCGAGGACGCGGGCTTCGAGATTCGCGACTCCATCGCCTGGCTGAACGGCAGCGGGTTT 46806 ||||| ||||| || ||||| || ||||||||| |||||||||| |||| || || Sbjct 7882 ATCGAAGACGCAGGATTCGAAATGCGCGACTCCCTCGCCTGGCTATACGGGTCAGGATTC 7941 Query 46807 CCCAAGTCGCTCGACGTGTCCAAGGCCATCGACAAGGCC 46845 || ||||| | |||||| ||||| |||||| ||||| Sbjct 7942 CCGAAGTCCTTGGACGTGGGGAAGGCAATCGAC-AGGCC 7979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 188628820809870