Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_028832.1 Length=61511 Score E Sequences producing significant alignments: (Bits) Value seq334 188 3e-43 >seq334 Length=7771 Score = 188 bits (208), Expect = 3e-43 Identities = 303/432 (70%), Gaps = 9/432 (2%) Strand=Plus/Minus Query 1798 TTCACCAATGGTTCGCGAATCCTGTTCGGCGCCCGTGAAAAAGGCTTCGGTCGCGGCTTC 1857 |||| || |||||||| || |||| || || || || ||||||||||| || ||| Sbjct 7150 TTCAAGAACGGTTCGCGCATTTTGTTTGGTGCTCGCGAGTCTGGCTTCGGTCGTGGGTTC 7091 Query 1858 GCGAAGGTCGATGTGCTGATTTTCGATGAGGCTCAGATCCTCACCGAGAACGCGATGGAC 1917 |||||||| || |||||||| ||||||||||| ||||||||||| ||||| || ||||| Sbjct 7090 GCGAAGGTGGACGTGCTGATCTTCGATGAGGCGCAGATCCTCACGGAGAAGGCCATGGAG 7031 Query 1918 GACATGGTGCCGGCGACGAACGCGTCACCAAACGCGCTGATCCTGTTGGCTGGCACGCCG 1977 |||||||| ||||| ||||||||| |||| || | ||| | | || ||||| || Sbjct 7030 GACATGGTTCCGGCAACGAACGCGGCACCTAATGGTCTGGTGTTCATGATCGGCACTCCC 6971 Query 1978 CCGAAGCCAACAGATCCGGGTGAGGTGTTCACGAATCTGCGGCTTGAAGCG--ATCGGC- 2034 ||| || || || ||||| ||||||||| ||| |||| | || ||| | | | Sbjct 6970 CCGCGCCCCACGGACCCGGGCGAGGTGTTCTCGA---TGCGCCGGGACGCGGCACTGTCG 6914 Query 2035 GGCGAGTCAACCGACGTCGGCTATGTCGAAATTTCGGCTGACGAGGACGCCGACCCTGAC 2094 |||||| | ||||| || || || | ||||| || ||||||| |||| ||| Sbjct 6913 GGCGAGGACCCGGACGTGATGTACGTGGAGCTGTCGGCCGATAAGGACGCGAACCCGGAC 6854 Query 2095 GACCGGTCGCAATACCCCAAGATGAACCCAAGCTACCCGCATCGCACGTCTTTGCGGTCG 2154 ||||| || | | ||| |||||| | |||||| || ||| | | | || Sbjct 6853 GACCGTGCGGCGTGGCGGAAGGCGAACCCGTCGTTCCCGCACCGGACGGGTGAGGGCGCG 6794 Query 2155 ATCCTGCGCATGAAGAAAGCGCT---GTCGGTCGACAGTTTCCGCCGCGAAGCGATGGGC 2211 ||| |||||||| ||| ||| ||| ||||| || ||||| || | ||||| Sbjct 6793 ATCTTGCGCATGCGGAAGCTGCTGGGGTCTGTCGAGTCGTTTCGCCGTGAGGGTCTGGGC 6734 Query 2212 ATTTGGGACAAG 2223 || |||||| || Sbjct 6733 ATCTGGGACGAG 6722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 196711953138330