Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_028846.1 Length=61081 Score E Sequences producing significant alignments: (Bits) Value seq334 197 5e-46 >seq334 Length=7771 Score = 197 bits (218), Expect = 5e-46 Identities = 310/437 (71%), Gaps = 19/437 (4%) Strand=Plus/Minus Query 1908 TTCACGAACGGGTCACGCATCCTGTTCGGCGCCCGTGAGAAGGGTTTCGGCCGTGGTTTC 1967 |||| |||||| || ||||| |||| || || || ||| || ||||| ||||| ||| Sbjct 7150 TTCAAGAACGGTTCGCGCATTTTGTTTGGTGCTCGCGAGTCTGGCTTCGGTCGTGGGTTC 7091 Query 1968 GCCAAGGTCGACGTGCTGATTTTCGATGAGGCGCAGATCCTCACCGAGAACGCTATGGAC 2027 || ||||| ||||||||||| ||||||||||||||||||||||| ||||| || ||||| Sbjct 7090 GCGAAGGTGGACGTGCTGATCTTCGATGAGGCGCAGATCCTCACGGAGAAGGCCATGGAG 7031 Query 2028 GACATGGTTCCGGCGACCAACGCCTCGCCTAACG---CGCTGATCCTGCTCGCTGGTACG 2084 |||||||||||||| || ||||| | ||||| | | || || || || || || Sbjct 7030 GACATGGTTCCGGCAACGAACGCGGCACCTAATGGTCTGGTGTTCATGATC---GGCACT 6974 Query 2085 CCGCCGAAGCCGAACGATCCCGGCGAGGTGTTCACGAACCTGCGCATGGACGCG---ATC 2141 || ||| || | || || |||||||||||| ||| ||||| ||||||| | Sbjct 6973 CCCCCGCGCCCCACGGACCCGGGCGAGGTGTTCTCGA---TGCGCCGGGACGCGGCACTG 6917 Query 2142 AACGGCGAGTCGACC--GACGTCGGGTATATCGAGATCTCGGCCGACGAGAACGCGCAGC 2199 |||||| |||| ||||| ||| | ||| | |||||||| || ||||| | | Sbjct 6916 TCGGGCGAG--GACCCGGACGTGATGTACGTGGAGCTGTCGGCCGATAAGGACGCGAACC 6859 Query 2200 CCGACGACGTCACGCAGTACCCGAAGATGAACCCGAGCTACCCGCACCGCACCTCGCTGC 2259 | |||||| || || | |||| ||||||| | ||||||||| || | Sbjct 6858 CGGACGACCGTGCGGCGTGGCGGAAGGCGAACCCGTCGTTCCCGCACCGGACGGGTGAGG 6799 Query 2260 GCTCGATTCTGCGTATGCGTAAAGCGTTGTCGTGGGAC-AG--CTTTCGCCGCGAGGCTA 2316 || |||| |||| ||||| || | || || | | || |||||||| |||| | Sbjct 6798 GCGCGATCTTGCGCATGCGGAAGCTGCTGGGGTCTGTCGAGTCGTTTCGCCGTGAGGGTC 6739 Query 2317 TGGGCATCTGGGACAAG 2333 |||||||||||||| || Sbjct 6738 TGGGCATCTGGGACGAG 6722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 195335964658030