Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_028920.1 Length=52530 Score E Sequences producing significant alignments: (Bits) Value seq117 161 3e-35 >seq117 Length=8551 Score = 161 bits (178), Expect = 3e-35 Identities = 188/249 (76%), Gaps = 10/249 (4%) Strand=Plus/Minus Query 41537 GGATTTCGGGAACCCGCTGCCGTTGATCCAGGCGATGGAGTCACGAATCTCGAAGCCCGC 41596 ||| |||||||| || |||| | |||||||| |||||| || || ||||| || || Sbjct 7950 GGACTTCGGGAATCCTGACCCGTATAGCCAGGCGAGGGAGTCGCGCATTTCGAATCCTGC 7891 Query 41597 GTCCTCGATGGCCACGGTCAGCCGGTGCCAGGTGCGGGAGCCACCGAAGGCGAGCAGGTG 41656 ||| |||||||| |||| || |||||||||||||||| ||||||||| ||| | ||| Sbjct 7890 GTCTTCGATGGCGACGGCGAGGCGGTGCCAGGTGCGGGTGCCACCGAAAGCGGCGATGTG 7831 Query 41657 CCCACCGGGCTTGAGGACCCGCAGGCATTGCTCC--CACATCTCGACGTCGAAGGCGATG 41714 |||||||||||||| ||||| ||| ||| | | ||| || | || || || | Sbjct 7830 TCCACCGGGCTTGAGTACCCGGTAGCA-CGCTTCGGCCCAT-TCCA-GTGACGGGGGAAG 7774 Query 41715 CCCGAGCCGTCCCACTTCTTGCCCATGAATCCCAGTTCGTAGGGCGGGTCTGTGAGAATT 41774 ||||||||| |||||||||||||| || || ||||||||||||| |||| ||| Sbjct 7773 -----GCCGTCCCATTTCTTGCCCATGAAGCCGAGGCCGTAGGGCGGGTCGGTGACGATT 7719 Query 41775 GCATCGACG 41783 || || ||| Sbjct 7718 GCGTCAACG 7710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 167972993739320