Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_028928.1 Length=53455 Score E Sequences producing significant alignments: (Bits) Value seq117 158 4e-34 >seq117 Length=8551 Score = 158 bits (174), Expect = 4e-34 Identities = 207/279 (74%), Gaps = 11/279 (4%) Strand=Plus/Minus Query 41216 GGCCTTGTCGATGGCCTTGGATACGTTGAGCGACTTCGGGAACCCGCTGCCGTAGAGCCA 41275 ||||| |||||| ||||| |||| | ||||||||||| || ||||| ||||| Sbjct 7979 GGCCT-GTCGATTGCCTTCCCCACGTCCAAGGACTTCGGGAATCCTGACCCGTATAGCCA 7921 Query 41276 GGCGATCGAGTCGCGGATCTCGAAACCGGCGTCCTCGATGGCCACGGTCAGCCGGTGCCA 41335 ||||| |||||||| || ||||| || ||||| |||||||| |||| || |||||||| Sbjct 7920 GGCGAGGGAGTCGCGCATTTCGAATCCTGCGTCTTCGATGGCGACGGCGAGGCGGTGCCA 7861 Query 41336 GGTGCGCGAACCGCCGAACGCCAACATGTGCCCACCCGGCTTGAGGACCCGCAGGCATTG 41395 |||||| | || ||||| || ||||| ||||| |||||||| ||||| ||| | Sbjct 7860 GGTGCGGGTGCCACCGAAAGCGGCGATGTGTCCACCGGGCTTGAGTACCCGGTAGCA-CG 7802 Query 41396 CTCC--CACATCTCGACATCGAAAGCGATGCCCGAGCCGTCCCACTTCTTGCCCATGAAT 41453 || | | ||| || || || || | | ||||||||| |||||||||||||| Sbjct 7801 CTTCGGCCCAT-TC--CAGTGA---CGGGGGAAG-GCCGTCCCATTTCTTGCCCATGAAG 7749 Query 41454 CCCAGCTCGTAGGGCGGGTCTGTGAGAATTGCATCGACG 41492 || || ||||||||||||| |||| ||||| || ||| Sbjct 7748 CCGAGGCCGTAGGGCGGGTCGGTGACGATTGCGTCAACG 7710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 170932968958570