Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_028936.1 Length=59052 Score E Sequences producing significant alignments: (Bits) Value seq334 154 6e-33 >seq334 Length=7771 Score = 154 bits (170), Expect = 6e-33 Identities = 189/257 (74%), Gaps = 6/257 (2%) Strand=Plus/Minus Query 1289 TGTTCGGTGCCCGCGAGAAGGGCTTTGGTCGCGGTTTCGCCAAGGTCGACGTCCTGATTT 1348 |||| ||||| |||||| ||||| ||||| || ||||| ||||| ||||| ||||| | Sbjct 7128 TGTTTGGTGCTCGCGAGTCTGGCTTCGGTCGTGGGTTCGCGAAGGTGGACGTGCTGATCT 7069 Query 1349 TCGACGAGGCGCAGATCCTCACCGAGAACGCGATGGACGACATGATCCCGGCGACCAACG 1408 |||| ||||||||||||||||| ||||| || ||||| |||||| | ||||| || |||| Sbjct 7068 TCGATGAGGCGCAGATCCTCACGGAGAAGGCCATGGAGGACATGGTTCCGGCAACGAACG 7009 Query 1409 CCGCGCCGAACGGCCTGGTGTTGTTCGCGGGCACGCCGCCGAAGCCGAGTGATCCCGGCG 1468 | || || || || |||||||| | ||||| || ||| || | || || |||| Sbjct 7008 CGGCACCTAATGGTCTGGTGTTCATGATCGGCACTCCCCCGCGCCCCACGGACCCGGGCG 6949 Query 1469 AGGTGTTCACCAACCTGCGGATGGACGCG---CTCAACGGCGAGTCCGTCGACGTTGCGT 1525 |||||||| | | |||| ||||||| || |||||| | ||||| || Sbjct 6948 AGGTGTTCTCGA---TGCGCCGGGACGCGGCACTGTCGGGCGAGGACCCGGACGTGATGT 6892 Query 1526 ACGTCGAGATTTCGGCC 1542 |||| ||| | |||||| Sbjct 6891 ACGTGGAGCTGTCGGCC 6875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 188843219014940