Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_028947.1 Length=62738 Score E Sequences producing significant alignments: (Bits) Value seq334 210 9e-50 >seq334 Length=7771 Score = 210 bits (232), Expect = 9e-50 Identities = 311/435 (71%), Gaps = 13/435 (3%) Strand=Plus/Minus Query 1499 TTCACGAACGGCTCACGGATTCTGTTCGGCGCCCGCGAAAAAGGCTTCGGTCGTGGTTTC 1558 |||| |||||| || || ||| |||| || || ||||| |||||||||||||| ||| Sbjct 7150 TTCAAGAACGGTTCGCGCATTTTGTTTGGTGCTCGCGAGTCTGGCTTCGGTCGTGGGTTC 7091 Query 1559 GCGAAGGTCGACGTGCTGATCTTCGACGAGGCGCAGATTCTCACCGAAAACGCAATGGAC 1618 |||||||| ||||||||||||||||| ||||||||||| ||||| || || || ||||| Sbjct 7090 GCGAAGGTGGACGTGCTGATCTTCGATGAGGCGCAGATCCTCACGGAGAAGGCCATGGAG 7031 Query 1619 GACATGGTGCCGGCGACGAACGCGTCGCCGAACGCGCTGATCCTGCTGGCCGGCACACCG 1678 |||||||| ||||| ||||||||| | || || | ||| | | || |||||| || Sbjct 7030 GACATGGTTCCGGCAACGAACGCGGCACCTAATGGTCTGGTGTTCATGATCGGCACTCCC 6971 Query 1679 CCGAAGCCAACGGACCCGGGTGAGGTGTTCACCAATCTGCGGCAGGAAGCG---CTCGAC 1735 ||| || ||||||||||| ||||||||| | | |||| | ||| ||| || Sbjct 6970 CCGCGCCCCACGGACCCGGGCGAGGTGTTCTCGA---TGCGCCGGGACGCGGCACTGTCG 6914 Query 1736 GGCGAGTCCTCCGACGTCGGTTACGTCGAAATCTCGGCCGACGACGACGCGGAGCCTGAC 1795 |||||| | | ||||| ||||| || | |||||||| | |||||| | || ||| Sbjct 6913 GGCGAGGACCCGGACGTGATGTACGTGGAGCTGTCGGCCGATAAGGACGCGAACCCGGAC 6854 Query 1796 GACGTCACCCAGTACCCGAAGATGAACCCAAGCTATCCGCACCGCACGTCGCTGCGG--T 1853 ||| | || | |||| |||||| | |||||||| ||| | || || Sbjct 6853 GACCGTGCGGCGTGGCGGAAGGCGAACCCGTCGTTCCCGCACCGGACG--GGTGAGGGCG 6796 Query 1854 CGATTCTGCGTATGCGGAA--AGC-GTTGTCTTACGACAGCTTCCGCCGCGAAGCAATGG 1910 |||| |||| |||||||| || | |||| ||| || ||||| || | ||| Sbjct 6795 CGATCTTGCGCATGCGGAAGCTGCTGGGGTCTGTCGAGTCGTTTCGCCGTGAGGGTCTGG 6736 Query 1911 GCATCTGGGACAAGA 1925 ||||||||||| ||| Sbjct 6735 GCATCTGGGACGAGA 6721 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200635076090995