Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_029059.1 Length=51492 Score E Sequences producing significant alignments: (Bits) Value seq117 176 1e-39 >seq117 Length=8551 Score = 176 bits (194), Expect = 1e-39 Identities = 207/274 (76%), Gaps = 12/274 (4%) Strand=Plus/Minus Query 40489 TGTCGATGGCCTTCGCCACGTCGAGCGACTTCGGGAATCCGCTGCCGTACAGCCACGCGA 40548 ||||||| |||||| ||||||| | |||||||||||||| ||||| ||||| |||| Sbjct 7975 TGTCGATTGCCTTCCCCACGTCCAAGGACTTCGGGAATCCTGACCCGTATAGCCAGGCGA 7916 Query 40549 TCGAGTCGCGAATCTCGAAGCCCGCGTCCTCGATGGCCACGGTCAGCCGGTGCCAGGTGC 40608 |||||||| || ||||| || ||||| |||||||| |||| || ||||||||||||| Sbjct 7915 GGGAGTCGCGCATTTCGAATCCTGCGTCTTCGATGGCGACGGCGAGGCGGTGCCAGGTGC 7856 Query 40609 GGGAGCCGCCGAAGGCGAGCAGGTGCCCACCGGGCTTGAGGACCCGCAGGCATTGCTCC- 40667 ||| ||| ||||| ||| | ||| |||||||||||||| ||||| ||| ||| | Sbjct 7855 GGGTGCCACCGAAAGCGGCGATGTGTCCACCGGGCTTGAGTACCCGGTAGCA-CGCTTCG 7797 Query 40668 -CACATCTCGACATCGA-AAGCGATGCCCGAGTTGTCCCACTTCTTACCCATGAAGGCCA 40725 | ||| || || || | || | || |||||| ||||| ||||||||| | | Sbjct 7796 GCCCAT-TC--CAGTGACGGGGGAAGGCC-----GTCCCATTTCTTGCCCATGAAGCCGA 7745 Query 40726 GCTCGTAGGGCGGGTCTGTGAGAATTGCATCGAC 40759 | ||||||||||||| |||| ||||| || || Sbjct 7744 GGCCGTAGGGCGGGTCGGTGACGATTGCGTCAAC 7711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164651421547340