Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq320 91.5 2e-13 seq385 86.0 9e-12 >seq320 Length=3991519 Score = 91.5 bits (100), Expect = 2e-13 Identities = 155/222 (70%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 78159 CCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCG 78218 ||||| || || | ||| | || || | ||| | || | || |||||||| |||||| Sbjct 317407 CCTCCTTGGTCAACATAACGAGCAGTATCATTGAATACACGCAGCATTGGAACAATACCA 317348 Query 78219 TTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGAT 78278 ||||| ||||||||||| ||| ||| || |||||| |||| || |||||| || || Sbjct 317347 TTAGACGTTCCATTTGTGCCACGAATGTAGCTTCCAGTTGCACGGATATTATGAACTGAA 317288 Query 78279 ATCCCTATTCCTCCTGCCATCTTAGAT-ATTAGAGCGCAACGTTTCAATGTATCGTAGAT 78337 | || || || || | || || | | || | ||| || ||| | ||| || || || Sbjct 317287 ACGCCAATACCCCCAG-CAGATTTGCTAATAACAGCACACTCTTTGAGTGTTTCATATAT 317229 Query 78338 ACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCT 78379 ||||| || || ||||| ||||| | ||||| ||||| Sbjct 317228 GCCCTCGATGCTATCATCTTTCATGCAGATCAGAAAGCAGCT 317187 >seq385 Length=11279646 Score = 86.0 bits (94), Expect = 9e-12 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 78398 AGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATT 78457 |||||| | ||| || | || ||||||||||| || |||||| | ||| | | || Sbjct 380262 AGTTCCAGAATTGAAGAGAGTGGGAGATGCATGAGTGAACCATCGCTGAGACATCAAATG 380203 Query 78458 GTATGTTTCAATAGCTGATTCTATGTC-CCATTGATGAATTCCTACCGCTACACGCATCA 78516 ||| |||| ||||| || || || || | ||| ||||| || || | || | ||| | Sbjct 380202 GTAAGTTTGGATAGCGGAATCAATATCTTCCTTG-TGAATGCCAACAGAAACCCTCATGA 380144 Query 78517 ACATATGCTGAGGTCTTTCAACCGTCTTATTATT-TATTTTCAACAAGTATGATTTTTCC 78575 ||| |||||||| ||||||| | ||| | || | ||| || | ||||||| | || Sbjct 380143 GCATGTGCTGAGGCCTTTCAATC-ACTTTTCCTTGGACTTTTAAGAGGTATGATCTCTCG 380085 Query 78576 AAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAAT 78625 | ||||| || ||||| |||| ||| ||| || | || ||||| || Sbjct 380084 AGTGTTTTGAATCCAAAGTAGTCATATTCAAAATCGCGATCATAAATGAT 380035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694662678231200