Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_031035.1 Length=61626 Score E Sequences producing significant alignments: (Bits) Value seq334 205 4e-48 >seq334 Length=7771 Score = 205 bits (226), Expect = 4e-48 Identities = 308/433 (71%), Gaps = 11/433 (3%) Strand=Plus/Minus Query 1762 TTCACCAACGGTTCTCGAATCCTGTTCGGCGCCCGCGAAAAGGGCTTCGGTCGTGGTTTC 1821 |||| |||||||| || || |||| || || ||||| |||||||||||||| ||| Sbjct 7150 TTCAAGAACGGTTCGCGCATTTTGTTTGGTGCTCGCGAGTCTGGCTTCGGTCGTGGGTTC 7091 Query 1822 GCGAAGGTCGACGTGCTGATTTTCGACGAGGCGCAGATTCTCACCGAGAACGCAATGGAC 1881 |||||||| ||||||||||| ||||| ||||||||||| ||||| ||||| || ||||| Sbjct 7090 GCGAAGGTGGACGTGCTGATCTTCGATGAGGCGCAGATCCTCACGGAGAAGGCCATGGAG 7031 Query 1882 GACATGGTGCCGGCGACGAACGCGTCACCTAACGCGCTGATCCTGCTGGCCGGCACACCG 1941 |||||||| ||||| ||||||||| ||||||| | ||| | | || |||||| || Sbjct 7030 GACATGGTTCCGGCAACGAACGCGGCACCTAATGGTCTGGTGTTCATGATCGGCACTCCC 6971 Query 1942 CCGAAGCCGACCGATCCCGGCGAGGTGTTCACGAATCTTCGGCTCGAAGCGATCAACGGC 2001 ||| || || || || |||||||||||| ||| | ||| || || | ||| Sbjct 6970 CCGCGCCCCACGGACCCGGGCGAGGTGTTCTCGATGCGCCGGGACGCGGCACTGTCGGGC 6911 Query 2002 GAGTCGACC--GACGTCGGCTATGTCGAAATTTCGGCCGACGAGGACGCGGAACCGGACG 2059 ||| |||| ||||| || || || | |||||||| |||||||| | ||||||| Sbjct 6910 GAG--GACCCGGACGTGATGTACGTGGAGCTGTCGGCCGATAAGGACGCGAACCCGGACG 6853 Query 2060 ACGTCACCCAGTACCCGAAGATGAACCCAAGCTACCCGCATCGCACGTCGCTGCGG--TC 2117 || | || | |||| |||||| | |||||| || ||| | || || | Sbjct 6852 ACCGTGCGGCGTGGCGGAAGGCGAACCCGTCGTTCCCGCACCGGACG--GGTGAGGGCGC 6795 Query 2118 GATTCAGCGCATGCGGAAAGCGCT---GTCTTGGGACAGCTTCCGCCGCGAAGCAATGGG 2174 ||| |||||||||||| ||| |||| || || ||||| || | |||| Sbjct 6794 GATCTTGCGCATGCGGAAGCTGCTGGGGTCTGTCGAGTCGTTTCGCCGTGAGGGTCTGGG 6735 Query 2175 CATCTGGGACAAG 2187 |||||||||| || Sbjct 6734 CATCTGGGACGAG 6722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 197079950057480