Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_031067.1 Length=52496 Score E Sequences producing significant alignments: (Bits) Value seq117 170 6e-38 >seq117 Length=8551 Score = 170 bits (188), Expect = 6e-38 Identities = 210/279 (75%), Gaps = 11/279 (4%) Strand=Plus/Minus Query 41042 GGCCTTGTCGATGGCCTTCGATACGTCGAGCGACTTCGGGAACCCGCTGCCGTACAGCCA 41101 ||||| |||||| |||||| ||||| | ||||||||||| || ||||| ||||| Sbjct 7979 GGCCT-GTCGATTGCCTTCCCCACGTCCAAGGACTTCGGGAATCCTGACCCGTATAGCCA 7921 Query 41102 GGCGATGGAGTCACGAATCTCGAAGCCCGCGTCCTCGATGGCCACGGTCAGCCGGTGCCA 41161 ||||| |||||| || || ||||| || ||||| |||||||| |||| || |||||||| Sbjct 7920 GGCGAGGGAGTCGCGCATTTCGAATCCTGCGTCTTCGATGGCGACGGCGAGGCGGTGCCA 7861 Query 41162 GGTGCGGGAGCCGCCGAAGGCGAGCAGGTGCCCACCGGGCTTGAGGACCCGCAGACATTG 41221 |||||||| ||| ||||| ||| | ||| |||||||||||||| ||||| || | Sbjct 7860 GGTGCGGGTGCCACCGAAAGCGGCGATGTGTCCACCGGGCTTGAGTACCCGGTAGCA-CG 7802 Query 41222 CTCC--CACATCTCGACATCGAAAGCGATGCCTGAGCTGTCCCACTTCTTGCCCATGAAG 41279 || | | ||| || || || || | | || |||||| ||||||||||||||| Sbjct 7801 CTTCGGCCCAT-TC--CAGTGA---CGGGGGAAG-GCCGTCCCATTTCTTGCCCATGAAG 7749 Query 41280 GCCAACTCGTAGGGCGGGTCTGTGACGATGGAGTCGACG 41318 | | ||||||||||||| |||||||| | ||| ||| Sbjct 7748 CCGAGGCCGTAGGGCGGGTCGGTGACGATTGCGTCAACG 7710 Score = 87.8 bits (96), Expect = 6e-13 Identities = 106/144 (74%), Gaps = 3/144 (2%) Strand=Plus/Minus Query 40767 CCGACGCGGCAGGCGGCGATGTTGAGCGCGCCGGTGCCGTGCTCGAGCACGTTCGCCGCG 40826 |||| | ||| ||| | | ||||| || ||||| || | | |||| |||||| || Sbjct 8474 CCGATCCTGCACGCGTCCACGTTGATTGCTCCGGTCCCATACGCGAGGACGTTCCTAGCA 8415 Query 40827 ACGGTGCCC---GCCAGGGGCTTCCGGGCGACGACGATCGGCTCGAATGCCGGTTTCAGC 40883 ||||| | || |||||||| ||||||| ||||| ||||| || || || || || Sbjct 8414 ACGGTCTTCTCGGCGAGGGGCTTACGGGCGAGCACGATAGGCTCAAACGCGGGCTTTAGA 8355 Query 40884 GCCGTGCCCCAGCCCTGCCACTGC 40907 |||||||||||||| | ||||||| Sbjct 8354 GCCGTGCCCCAGCCGTCCCACTGC 8331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 167864194650180