Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_031243.1 Length=42395 Score E Sequences producing significant alignments: (Bits) Value seq117 107 5e-19 >seq117 Length=8551 Score = 107 bits (118), Expect = 5e-19 Identities = 134/184 (73%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 36931 TGGGCGGCTGAGTGCTTGCGCGTGTTGAAACCGGGCGGTCACCTGCTCGCGTTCGGCGGC 36990 ||||| | | ||||| || || | || || || || ||| | ||| ||||| ||| Sbjct 7792 TGGGCCGAAGCGTGCTACCGGGTACTCAAGCCCGGTGGACACATCGCCGCTTTCGGTGGC 7851 Query 36991 TCCCGCACCTGGCACCGGCTGGCGGCGGCGATCGAGGACGCGGGCTTCGAGGTTCGCGAC 37050 |||||||||||||||| || || | || ||||| ||||| || ||||| | |||||| Sbjct 7852 ACCCGCACCTGGCACCGCCTCGCCGTCGCCATCGAAGACGCAGGATTCGAAATGCGCGAC 7911 Query 37051 TCGATCGCGTGGCTGTACGGCAGCGGGTTCCCGAAGTCGCTCGACGTGTCAAAAGCGATC 37110 || |||| ||||| ||||| || ||||||||||| | |||||| || || ||| Sbjct 7912 TCCCTCGCCTGGCTATACGGGTCAGGATTCCCGAAGTCCTTGGACGTGGGGAAGGCAATC 7971 Query 37111 GACA 37114 |||| Sbjct 7972 GACA 7975 Score = 98.7 bits (108), Expect = 3e-16 Identities = 123/168 (73%), Gaps = 3/168 (2%) Strand=Plus/Plus Query 37267 ACCGCCCCCGCTACGTCTGACGCTGCTAAGTGGCAGGGCTGGGGCACTGCGCTGAAACCG 37326 ||||||||||| || |||| || || ||||| | ||||||||||| || || || || Sbjct 8305 ACCGCCCCCGCGACTCCTGAGGCCGCGCAGTGGGACGGCTGGGGCACGGCTCTAAAGCCC 8364 Query 37327 GCGTTCGAGCCGATCGTGGTCGCGCGTAAACCGCTGGC---GGGCACCGTGGCTGCGAAC 37383 ||||| ||||| |||||| |||| ||||| || || || | ||||| ||| |||| Sbjct 8365 GCGTTTGAGCCTATCGTGCTCGCCCGTAAGCCCCTCGCCGAGAAGACCGTTGCTAGGAAC 8424 Query 37384 GTCCTGGAGCACGGTACGGGGGCGCTGAACATCGACGCCTGCCGCATC 37431 ||||| | | | || || || || | ||| | ||||| ||| | ||| Sbjct 8425 GTCCTCGCGTATGGGACCGGAGCAATCAACGTGGACGCGTGCAGGATC 8472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135541265255970