Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_031267.1 Length=42979 Score E Sequences producing significant alignments: (Bits) Value seq334 107 5e-19 >seq334 Length=7771 Score = 107 bits (118), Expect = 5e-19 Identities = 297/447 (66%), Gaps = 20/447 (4%) Strand=Plus/Minus Query 742 ATCCTGTTCAACAATGGGTCTCGGATCATGTTCGGTGCCCGTGAGTCCGGGTTCGGCCGC 801 ||| | ||||| || || || || || |||| ||||| || ||||| || ||||| || Sbjct 7156 ATCGTTTTCAAGAACGGTTCGCGCATTTTGTTTGGTGCTCGCGAGTCTGGCTTCGGTCGT 7097 Query 802 GGCATGACCAACGTCGGCATCCTCGTGCTTGACGAGGGTCAGATCTTGCCGGAGTCGACG 861 || | | || || | | | || | | || |||| |||||| | ||||| | | Sbjct 7096 GGGTTCGCGAAGGTGGACGTGCTGATCTTCGATGAGGCGCAGATCCTCACGGAGAAGGCC 7037 Query 862 CTCGAGGACATGGGCGCCACGCAGAACGTTGCGGTGAATCCGTTGACGTTTGTGATGGGT 921 | |||||||||| | | ||||| || ||| || ||| |||| || Sbjct 7036 ATGGAGGACATGGTTCCGGCAACGAACGCGGCACCTAATGGTCTGGTGTTCATGATCGGC 6977 Query 922 ACGCCGCCACGACCTCGTGACGATGGGGAGTTCTTCTCGTCGCTGCGGCAGGAAGCGG-- 979 || || || || || ||| || ||| | |||||| |||| | ||| |||| Sbjct 6976 ACTCCCCCGCGCCCCACGGACCCGGGCGAGGTGTTCTCGA---TGCGCCGGGACGCGGCA 6920 Query 980 ---TCGACGGCGAGT---CGGACGGCACGCTGTACATCGAGTTCTCCGCAGACCGCGGGT 1033 ||| |||||| |||||| | ||||| | ||| | || || || || Sbjct 6919 CTGTCG--GGCGAGGACCCGGACGTGA---TGTACGTGGAGCTGTCGGCCGATAA-GGAC 6866 Query 1034 GCGA-CCCGATGGACCG-GCAGCAGTGGCGGAAGGCGAACCCGTCGTTCCCGCATCGCAC 1091 |||| |||| ||||| || || |||||||||||||||||||||||||||||| || || Sbjct 6865 GCGAACCCGGACGACCGTGCGGC-GTGGCGGAAGGCGAACCCGTCGTTCCCGCACCGGAC 6807 Query 1092 TTCGGAACGCGCGCTGTTGCGGCTGCGGAAGAAGCTCAAGTCTGACGACTCATGGAACCG 1151 || ||||| | ||||| |||||||| ||| ||||| ||| || | ||| Sbjct 6806 GGGTGAGGGCGCGATCTTGCGCATGCGGAAGCTGCTGGGGTCTGTCGAGTCGTTTCGCCG 6747 Query 1152 TGAGGCGCTGGGCATCTGGGATGAGAA 1178 ||||| |||||||||||||| ||||| Sbjct 6746 TGAGGGTCTGGGCATCTGGGACGAGAA 6720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137410049610610