Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conyza_20canadensis_20[genbank_20GCA_5F000775935.1_202014-11-13] 20,075 sequences; 326,165,195 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq13411 132 1e-25 seq5340 132 1e-25 seq13106 131 4e-25 seq8473 131 4e-25 seq16006 111 4e-19 seq10926 107 5e-18 seq8384 107 5e-18 seq7910 107 5e-18 seq5280 107 5e-18 seq4675 107 5e-18 seq16550 105 2e-17 seq4586 98.7 2e-15 seq8889 93.3 1e-13 seq1845 91.5 3e-13 seq14670 86.0 1e-11 seq6802 86.0 1e-11 seq6637 86.0 1e-11 >seq13411 Length=19963 Score = 132 bits (146), Expect = 1e-25 Identities = 161/218 (74%), Gaps = 1/218 (0%) Strand=Plus/Minus Query 288260 TAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGT 288319 |||| || | ||||| ||| ||||||||||||||| |||||||| | || | |||| Sbjct 11474 TAAG-ACCAAATGAAGAGTGGATTCTTTTTGGATATTGTAGTCGGCTAATGTCCTGCCGT 11416 Query 288320 CTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTAT 288379 |||| | |||||| ||||| ||||| | ||| ||||| |||||| |||||||| | Sbjct 11415 CTTCAAGTTGTTTGCCTGCAAAGATTAAACGTTGTTGGTCTGGTGGGATGCCTTCTTTGT 11356 Query 288380 CCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCG 288439 | || || || |||||||| || || || | ||| ||||| ||||| | || || | Sbjct 11355 CTTGAATCTTGGCTTTCACATTGTCGATTGTGTCGGAGGATTCGACTTCTAAGGTTATTG 11296 Query 288440 TCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 | || ||||| | || || ||||| ||||||||| || Sbjct 11295 TTTTGCCGGTTAAGGTTTTTACGAAGATCTGCATTTTG 11258 >seq5340 Length=22833 Score = 132 bits (146), Expect = 1e-25 Identities = 161/218 (74%), Gaps = 1/218 (0%) Strand=Plus/Plus Query 288260 TAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGT 288319 |||| || | ||||| ||| ||||||||||||||| |||||||| | || | |||| Sbjct 14277 TAAG-ACCAAATGAAGAGTGGATTCTTTTTGGATATTGTAGTCGGCTAATGTCCTGCCGT 14335 Query 288320 CTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTAT 288379 |||| | |||||| ||||| ||||| | ||| ||||| |||||| |||||||| | Sbjct 14336 CTTCAAGTTGTTTGCCTGCAAAGATTAAACGTTGTTGGTCTGGTGGGATGCCTTCTTTGT 14395 Query 288380 CCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCG 288439 | || || || |||||||| || || || | ||| ||||| ||||| | || || | Sbjct 14396 CTTGAATCTTGGCTTTCACATTGTCGATTGTGTCGGAGGATTCGACTTCTAAGGTTATTG 14455 Query 288440 TCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 | || ||||| | || || ||||| ||||||||| || Sbjct 14456 TTTTGCCGGTTAAGGTTTTTACGAAGATCTGCATTTTG 14493 >seq13106 Length=76417 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || |||||||| | ||| || || ||||| || ||||||||||| ||||| |||||| Sbjct 56339 AGGACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCT 56280 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || | || || || |||||||| ||||| || || |||||| ||||| || || Sbjct 56279 TCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCGGGTGGGATGCCTTCCTTGTCT 56220 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441 ||||| || || || ||||| || || | ||| || || || || || || |||||| Sbjct 56219 TGGATCTTGGCCTTGACGTTATCGATGGTGTCGGAAGACTCAACCTCTAGGGTTATCGTC 56160 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || || || || ||||| |||||||| Sbjct 56159 TTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 56128 >seq8473 Length=8692 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || |||||||| | ||| || || ||||| || ||||||||||| ||||| |||||| Sbjct 5369 AGGACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCT 5428 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || | || || || |||||||| ||||| || || |||||| ||||| || || Sbjct 5429 TCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCGGGTGGGATGCCTTCCTTGTCT 5488 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441 ||||| || || || ||||| || || | ||| || || || || || || |||||| Sbjct 5489 TGGATCTTGGCCTTGACGTTATCGATGGTGTCGGAAGACTCAACCTCTAGGGTTATCGTC 5548 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || || || || ||||| |||||||| Sbjct 5549 TTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 5580 >seq16006 Length=16259 Score = 111 bits (122), Expect = 4e-19 Identities = 166/233 (71%), Gaps = 12/233 (5%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||||| | ||| | ||| ||||||||||| || |||||||| Sbjct 13261 CCACCACGGAGACGGAGTACCAAATGCAATGTGGACTCTTTTTGGATGTTGTAGTCGGCC 13202 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG- 288365 || || | || || || | ||| || || || || |||| | || || ||||| Sbjct 13201 AGGGTCCTGCCATCCTCGAGTTGCTTGCCAGCAAAAATCAACCTTTGCTGG---TCTGGC 13145 Query 288366 --GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 ||| ||||||||||| ||||| || || || ||||| || || | || ||| | Sbjct 13144 GGGATCCCTTCTTTATCTTGGATCTTTGCCTTGACGTTGTCAATGGTGTCAGAGCT---T 13088 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | ||||| |||||||| |||| |||||||||||| || ||||| Sbjct 13087 TCGACCTCCAAAGTGATGGTCTTCCCTGTCAAAGTCTTGACGAAGATTTGCAT 13035 Score = 98.7 bits (108), Expect = 2e-15 Identities = 139/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| |||||||| ||||| || || || || || ||||| | ||||||||||| ||| Sbjct 13453 TCTTTCTGGATATTGTAGTCTGCTAGAGTACGCCCATCTTCGAGCTGTTTTCCTGCAAAG 13394 Query 288343 ATCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || || | || || ||||| ||| || ||||||||||| || || || || ||| Sbjct 13393 ATAAGCCTTTGCTGG---TCTGGCGGGATCCCCTCTTTATCCTGAATCTTAGCCTTGACG 13337 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||| ||| || || | ||||| || || || |||| || || Sbjct 13336 TTGTCAATCGTATCAGAACTTTCAACCTCTAAAGTGATGGTTTTTCCTGTCAAGGTTTTC 13277 Query 288460 ACGAATATCTGCAT 288473 || ||||||||||| Sbjct 13276 ACAAATATCTGCAT 13263 >seq10926 Length=11099 Score = 107 bits (118), Expect = 5e-18 Identities = 141/194 (73%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || || || || || || || || ||||| | ||||||||||| ||| Sbjct 8292 TCTTTCTGGATGTTGTAATCAGCTAGAGTACGACCATCTTCAAGCTGTTTTCCTGCAAAG 8351 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||| || |||||||||||||||||| ||||| || || || ||||| Sbjct 8352 ATAAGCCTCTGCTGGTCCGGTGGGATTCCTTCTTTATCTTGGATCTTAGCCTTGACGTTG 8411 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | ||| ||| ||| || || | || || || ||||| |||| ||| || Sbjct 8412 TCAATGGTATCCGAGCT---TTCAACCTCCAAAGTAATGGTTTTCCCTGTCAAAGTTTTC 8468 Query 288460 ACGAATATCTGCAT 288473 || || |||||||| Sbjct 8469 ACAAAAATCTGCAT 8482 Score = 105 bits (116), Expect = 2e-17 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| || | || || || ||||| | |||||||||||| ||| Sbjct 8064 TCCTTCTGGATGTTGTAGTCTGCCAAAGTACGCCCATCTTCGAGTTGTTTTCCTGCAAAG 8123 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | || || ||||||||||||||||||||| || || || || || || Sbjct 8124 ATAAGCCTTTGCTGGTCTGGTGGGATTCCTTCTTTATCCTGAATCTTAGCCTTGACATTG 8183 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| ||| || || | ||||| || || ||||||| |||||||| Sbjct 8184 TCAATCGTATCAGAACTTTCAACCTCTAAAGTGATTGTTTTTCCGGTCAACGTCTTGACA 8243 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 8244 AAAATCTGCAT 8254 Score = 98.7 bits (108), Expect = 2e-15 Identities = 154/218 (71%), Gaps = 8/218 (4%) Strand=Plus/Plus Query 288259 CTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCG 288318 || || || ||||| | || ||| |||||||| || || || || | || || ||| Sbjct 8722 CTCAGCACAAGATGGAGGGTTGATTCCTTTTGGATGTTGTAATCTGCCAAGGTACGCCCG 8781 Query 288319 TCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTA 288378 || || | || || || || ||||||| | |||||| |||||| ||||| || Sbjct 8782 TCCTCGAGCTGCTTGCCAGCAAAGATCAACCTCTGTTGGTCTGGTGGGATCCCTTCCTTG 8841 Query 288379 TCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTG 288435 |||||||||||||| || || || || || | ||| |||| || || ||||| ||| Sbjct 8842 TCCTGGATTTTCGCCTTGACATTATCGATGGTATCTGAGCTC---TCGACCTCGAGAGTG 8898 Query 288436 ATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | || || |||||||| || || |||||||| Sbjct 8899 ATAGTTTACC--GTAAGAGTCTTCACAAAGATCTGCAT 8934 Score = 89.7 bits (98), Expect = 1e-12 Identities = 139/195 (71%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || ||||| |||||||| || | ||||| || || || | || || || || || Sbjct 8519 TTCCTTCTGGATGTTATAGTCTGCCAAGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAA 8578 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 |||| | ||| || |||||| || || || ||||| || || || || ||||| Sbjct 8579 AATCAACCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGAATCTTAGCCTTGACGTT 8638 Query 288402 TTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 || || | || ||| ||| || || | ||||| ||||||||||||| |||||| Sbjct 8639 GTCAATGGTGTCAGAGCT---TTCGACCTCCAA-GTGAT-GTCTTCCCGGTCAAAGTCTT 8693 Query 288459 GACGAATATCTGCAT 288473 |||||| |||||||| Sbjct 8694 GACGAAGATCTGCAT 8708 >seq8384 Length=24589 Score = 107 bits (118), Expect = 5e-18 Identities = 158/221 (71%), Gaps = 12/221 (5%) Strand=Plus/Minus Query 288259 CTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCG 288318 || || || ||||| | || ||| ||||| || || || ||||| | || || ||| Sbjct 3572 CTGAGAACAAGATGGAGGGTTGATTCCTTTTGAATGTTGTAATCGGCCAAGGTACGACCG 3513 Query 288319 TCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCT 288375 || || | || ||||| || ||||||| | ||| || |||||| || |||||| Sbjct 3512 TCCTCGAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGG---TCTGGGGGGATCCCTTCT 3456 Query 288376 TTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCTACTTCGAGC 288432 || || ||||||||||| || || || || |||| || |||| || |||||||| Sbjct 3455 TTGTCTTGGATTTTCGCCTTAACATTATCGATAGTGTCAGAGCTC---TCGACTTCGAGA 3399 Query 288433 GTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || || || || |||||||| || || |||||||| Sbjct 3398 GTGATGGTTTTACCAGTAAGAGTCTTAACAAAGATCTGCAT 3358 >seq7910 Length=9655 Score = 107 bits (118), Expect = 5e-18 Identities = 158/221 (71%), Gaps = 12/221 (5%) Strand=Plus/Minus Query 288259 CTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCG 288318 || || || ||||| | || ||| ||||| || || || ||||| | || || ||| Sbjct 1808 CTGAGAACAAGATGGAGGGTTGATTCCTTTTGAATGTTGTAATCGGCCAAGGTACGACCG 1749 Query 288319 TCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCT 288375 || || | || ||||| || ||||||| | ||| || |||||| || |||||| Sbjct 1748 TCCTCGAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGG---TCTGGGGGGATCCCTTCT 1692 Query 288376 TTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCTACTTCGAGC 288432 || || ||||||||||| || || || || |||| || |||| || |||||||| Sbjct 1691 TTGTCTTGGATTTTCGCCTTAACATTATCGATAGTGTCAGAGCTC---TCGACTTCGAGA 1635 Query 288433 GTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || || || || |||||||| || || |||||||| Sbjct 1634 GTGATGGTTTTACCAGTAAGAGTCTTAACAAAGATCTGCAT 1594 >seq5280 Length=29361 Score = 107 bits (118), Expect = 5e-18 Identities = 158/221 (71%), Gaps = 12/221 (5%) Strand=Plus/Minus Query 288259 CTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCG 288318 || || || ||||| | || ||| ||||||||||| ||||| || | ||||| || Sbjct 6530 CTCAGCACAAGATGGAGGGTCGATTCCTTTTGGATATTGTAGTCTGCCAATGTGCGACCA 6471 Query 288319 TCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCT 288375 || || | || ||||| || ||||| || | ||| || |||||| || ||||| Sbjct 6470 TCCTCAAGCTGCTTTCCGGCAAAGATGAGCCTCTGCTGG---TCTGGGGGGATCCCTTCC 6414 Query 288376 TTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCTACTTCGAGC 288432 || || ||||||||||| || || || || || | ||| |||| || ||||| || Sbjct 6413 TTGTCTTGGATTTTCGCCTTAACATTATCGATGGTATCTGAGCTC---TCGACTTCAAGA 6357 Query 288433 GTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| || || ||||| || || || |||||||| Sbjct 6356 GTGATGGTCTTACCAGTGAGAGTTTTAACAAAGATCTGCAT 6316 >seq4675 Length=16269 Score = 107 bits (118), Expect = 5e-18 Identities = 158/221 (71%), Gaps = 12/221 (5%) Strand=Plus/Minus Query 288259 CTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCG 288318 || || || ||||| | || ||| ||||| || || || ||||| | || || ||| Sbjct 15959 CTGAGAACAAGATGGAGGGTTGATTCCTTTTGAATGTTGTAATCGGCCAAGGTACGACCG 15900 Query 288319 TCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCT 288375 || || | || ||||| || ||||||| | ||| || |||||| || |||||| Sbjct 15899 TCCTCGAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGG---TCTGGGGGGATCCCTTCT 15843 Query 288376 TTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCTACTTCGAGC 288432 || || ||||||||||| || || || || |||| || |||| || |||||||| Sbjct 15842 TTGTCTTGGATTTTCGCCTTAACATTATCGATAGTGTCAGAGCTC---TCGACTTCGAGA 15786 Query 288433 GTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || || || || |||||||| || || |||||||| Sbjct 15785 GTGATGGTTTTACCAGTAAGAGTCTTAACAAAGATCTGCAT 15745 >seq16550 Length=20979 Score = 105 bits (116), Expect = 2e-17 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| || | || || || ||||| | |||||||||||| ||| Sbjct 17484 TCCTTCTGGATGTTGTAGTCTGCCAAAGTACGCCCATCTTCGAGTTGTTTTCCTGCAAAG 17543 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | || || ||||||||||||||||||||| || || || || || || Sbjct 17544 ATAAGCCTTTGCTGGTCTGGTGGGATTCCTTCTTTATCCTGAATCTTAGCCTTGACATTG 17603 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| ||| || || | ||||| || || ||||||| |||||||| Sbjct 17604 TCAATCGTATCAGAACTTTCAACCTCTAAAGTGATTGTTTTTCCGGTCAACGTCTTGACA 17663 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 17664 AAAATCTGCAT 17674 >seq4586 Length=18721 Score = 98.7 bits (108), Expect = 2e-15 Identities = 142/198 (72%), Gaps = 12/198 (6%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || || || || ||||| || || || || ||||| || | ||||| || || || Sbjct 13916 TTCCTTCTGAATGTTGTAGTCAGCAAGGGTACGACCGTCCTCAAGCTGTTTCCCGGCAAA 13975 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 |||||| | ||| ||| |||||| || |||||||| || || || || || || || Sbjct 13976 GATCAGCCTCTGCTGA---TCTGGGGGAATCCCTTCTTTGTCTTGAATCTTGGCCTTAAC 14032 Query 288399 GTTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGT 288455 || || || | || |||| || || ||||| ||||| ||||| || |||| ||| Sbjct 14033 ATTGTCAATGGTGTCAGAGCTC---TCCACCTCGAGAGTGATGGTCTTTCCAGTCAAAGT 14089 Query 288456 CTTGACGAATATCTGCAT 288473 || || ||||||||||| Sbjct 14090 TTTCACAAATATCTGCAT 14107 >seq8889 Length=9065 Score = 93.3 bits (102), Expect = 1e-13 Identities = 162/233 (70%), Gaps = 12/233 (5%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || ||||| | || || |||||||| || ||||| || Sbjct 1842 CCACCACGAAGACGGAGGACCAGATGGAGGGTCGACTCCTTTTGGATGTTGTAGTCTGCC 1783 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | ||| | || ||||| | || || || || ||||||| | ||| || |||||| Sbjct 1782 AACGTTCTGCCATCTTCAAGCTGCTTACCAGCAAAGATCAATCTCTGCTGG---TCTGGG 1726 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 || ||||| ||||| || || || ||||| || || || |||| || ||| | Sbjct 1725 GGGATACCTTCCTTATCTTGAATCTTTGCTTTGACATTGTCAATAGTGTCAGAGCT---T 1669 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || | ||||| || ||||| |||| ||||||||||| |||||||| Sbjct 1668 TCGACCTCCAAAGTGATGGTTTTCCCTGTCAATGTCTTGACGAAGATCTGCAT 1616 >seq1845 Length=6980 Score = 91.5 bits (100), Expect = 3e-13 Identities = 140/197 (71%), Gaps = 12/197 (6%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || |||||||| || ||||| || | || | || || || | || || || ||||| Sbjct 3783 TCCTTTTGGATGTTGTAGTCTGCCAAGGTCCTGCCATCCTCAAGCTGCTTACCAGCGAAA 3842 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 |||| | ||| ||| |||||| || ||||| || |||||||| || || || ||| Sbjct 3843 ATCAACCTCTGCTGA---TCTGGGGGGATCCCTTCCTTGTCCTGGATCTTAGCCTTGACG 3899 Query 288400 TTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 || || || | || ||| ||| || || | ||||| ||||| ||||||| ||| Sbjct 3900 TTGTCAATGGTGTCAGAGCT---TTCGACCTCCAAAGTGATGGTCTTTCCGGTCAACGTC 3956 Query 288457 TTGACGAATATCTGCAT 288473 |||||||| |||||||| Sbjct 3957 TTGACGAAGATCTGCAT 3973 Score = 87.8 bits (96), Expect = 4e-12 Identities = 159/230 (69%), Gaps = 7/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || | ||| | || || || ||||| || || || || Sbjct 3520 CCACCACGGAGACGGAGGACCAAATGGAGAGTAGACTCCTTCTGGATGTTGTAATCAGCA 3579 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || |||||||| ||||||| | ||| || |||| Sbjct 3580 AGGGTACGCCCATCCTC-AGCTGCTTTCCTGCAAAGATCAACCTCTGCTGGTCTGGTGGG 3638 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || ||||| || ||||| || || ||||| || || | || |||| || Sbjct 3639 ATCCCCTCCTTATCTTGAATTTTAGCCTTGACGTTGTCAATGGTGTCAGAGCTC---TCA 3695 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | || || ||||| || |||| |||||||||||| |||||||| Sbjct 3696 ACCTCCAAAGTAATTGTCTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 3745 >seq14670 Length=61898 Score = 86.0 bits (94), Expect = 1e-11 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| | | ||| | |||||||||| ||| ||| ||||||||||| || || || Sbjct 31899 TCCACCTCTCAATCTCAAAACGAGATGAAGCGTCGATTCCTTTTGGATATTGTAATCAGC 31958 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || | ||| |||||||||||||| || || || |||| | |||||| | || Sbjct 31959 AAGTGTTCTTCCATCTTCTAATTGTTTCCCAGCAAATATCAATCTTTGTTGATCAGGCGG 32018 Query 288366 GATTCCTTCTTTATCCT 288382 ||||| ||||| |||| Sbjct 32019 AATTCCCTCTTTGTCCT 32035 >seq6802 Length=18417 Score = 86.0 bits (94), Expect = 1e-11 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| | | ||| | |||||||||| ||| ||| ||||||||||| || || || Sbjct 11285 TCCACCTCTCAATCTCAAAACGAGATGAAGCGTCGATTCCTTTTGGATATTGTAATCAGC 11226 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || | ||| |||||||||||||| || || || |||| | |||||| | || Sbjct 11225 AAGTGTTCTTCCATCTTCTAATTGTTTCCCAGCAAATATCAATCTTTGTTGATCAGGCGG 11166 Query 288366 GATTCCTTCTTTATCCT 288382 ||||| ||||| |||| Sbjct 11165 AATTCCCTCTTTGTCCT 11149 >seq6637 Length=15695 Score = 86.0 bits (94), Expect = 1e-11 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| | | ||| | |||||||||| ||| ||| ||||||||||| || || || Sbjct 3997 TCCACCTCTCAATCTCAAAACGAGATGAAGCGTCGATTCCTTTTGGATATTGTAATCAGC 3938 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || | ||| |||||||||||||| || || || |||| | |||||| | || Sbjct 3937 AAGTGTTCTTCCATCTTCTAATTGTTTCCCAGCAAATATCAATCTTTGTTGATCAGGCGG 3878 Query 288366 GATTCCTTCTTTATCCT 288382 ||||| ||||| |||| Sbjct 3877 AATTCCCTCTTTGTCCT 3861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179350979985850