Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conyza_20canadensis_20[genbank_20GCA_5F000775935.1_202014-11-13] 20,075 sequences; 326,165,195 total letters Query= NC_013085.1 Length=194454 Score E Sequences producing significant alignments: (Bits) Value seq20014 711 0.0 seq2978 610 8e-170 seq20016 567 9e-157 seq2990 471 5e-128 seq2982 187 3e-42 seq15940 172 7e-38 seq7755 136 5e-27 seq13577 114 2e-20 seq12569 107 2e-18 seq6618 100 4e-16 >seq20014 Length=5322 Score = 711 bits (788), Expect = 0.0 Identities = 752/988 (76%), Gaps = 2/988 (0%) Strand=Plus/Plus Query 7534 AGCAGCAAGGTCAAGAGGGAAGTTGTGAGCATTACGCTCGTGCATGACTTCCATGCCAAG 7593 |||||| | ||| |||||||| |||||||||||||| || ||||| |||||||| ||||| Sbjct 934 AGCAGCTAAGTCTAGAGGGAAATTGTGAGCATTACGTTCATGCATAACTTCCATACCAAG 993 Query 7594 ACCAGCACGGTTGAGCACGTCTGCCCAGGTGTTCAGGACACGACCTTGACCATCAATGAT 7653 ||||||||| | | || ||||| ||||| | ||||| ||||||| ||||| | Sbjct 994 GTTAGCACGGTTAATGATATCAGCCCAAGTGTTAATTACACGGCCTTGACTATCAACTAC 1053 Query 7654 GGACTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATGGTGCTAACACCAAGAGCAGT 7713 || |||||||| |||||||| || |||||||| ||||| ||||| | ||| | |||||| Sbjct 1054 TGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTGATACCTAAAGCAGT 1113 Query 7714 GAACCAGATGCCAACAACTGGCCATGCTGCGAGGAAGAAGTGCAGCGAACGGGAGTTGTT 7773 ||||||||| || || || ||||| || || |||||||| || | ||||| |||||||| Sbjct 1114 GAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAGAGTTGTT 1173 Query 7774 GAACGAAGCGTATTGGAAGATCAGACGACCAAAGTATCCGTGAGCAGCAACGATGTTGTA 7833 ||| ||| ||||||||||||| || ||||| || |||||||| || ||||| || || Sbjct 1174 GAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCGGCTACGATATTATA 1233 Query 7834 GGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGGGACTCAGACTCAGTGGTTTC 7893 || ||||||||||||||||| | ||||| | ||| || ||| || |||||||| Sbjct 1234 AGTTTCTTCTTCTTGACCGAATCTGTAACCTTCGTTAGCAGATTCATTTTCTGTGGTTTC 1293 Query 7894 ACGAACCAGAGAAGAGGTTACAAGCGAACCATGCATCGCACTGAACAGAGAACCACCAAA 7953 | | || | ||||||||| | ||||||||||| ||||| || || || || || || Sbjct 1294 CCTGATCAAACTAGAGGTTACCAAAGAACCATGCATAGCACTAAATAGGGAGCCGCCGAA 1353 Query 7954 GACACCAGCGACGCCCAGCATGTGGAAGGGGTGCATCAGGATGTTGTGCTCTGCTTGGAA 8013 |||||||| ||||| |||||||| || |||||||| |||||||||||||| || ||||| Sbjct 1354 TACACCAGCTACGCCTAGCATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAA 1413 Query 8014 GACAAGCATGTAGTTGAACGTACCAGAGATGCCAAGAGGCATAGCGTCAGAGAAAGAACC 8073 |||| |||| ||||||| |||||||| || || ||||||||| | ||||| || || Sbjct 1414 TACAATCATGAAGTTGAAAGTACCAGAAATTCCTAGAGGCATACCATCAGAAAAGCTTCC 1473 Query 8074 TTGACCGAAAGGATAGACGAGGAATACAGCAGATGCTGCAGCAACTGGAGCAGAGTATGC 8133 |||||| | || |||| | ||| ||||||| || || ||||| ||||| || ||||| Sbjct 1474 TTGACCAATTGGGTAGATCAAGAAAACAGCAGTCGCAGCTGCAACAGGAGCTGAATATGC 1533 Query 8134 TACACAGATCCAGGGACGCATACCTAGACGGTAAGAAAGTTCCCACTCACGACCCATGTA 8193 ||| ||||| || |||||||| |||||| || |||||||||||||||||||||||| Sbjct 1534 AACAGCAATCCAAGGTCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATGTA 1593 Query 8194 TGCATAGATACCGATCAGGAAGTGGAAGATAACGAGTTGGAAAGGACCACCGTTGTAGAG 8253 | | ||| | | |||||| | | || |||| |||||||||| ||||| | Sbjct 1594 ACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCATTGTATAA 1653 Query 8254 CCACTCATCAAGAGAAGCTGCTTCCCAGATGGGATAGAAGTGGAGACCAATAGCGTTAGA 8313 ||| ||||||| ||| ||||||||||| || || || || || | ||| ||||| ||| Sbjct 1654 CCATTCATCAACAGATGCTGCTTCCCATATTGGGTAAAAATGCAAACCTATAGCTGCAGA 1713 Query 8314 AGAAGGAACAACAGCACCAGAGATGATGTTGTTGCCATACATGAGCGAACCAGCGACGGG 8373 || ||||| || ||||| || || || ||||| ||||| | || || |||| || || Sbjct 1714 AGTAGGAATAATGGCACCCGAAATAATATTGTTTCCATAAAGTAGAGATCCAGAAACAGG 1773 Query 8374 TTCACGGATGCCGTCAATGTCCACAGGAGGAGCAGCGACGAAAGCGACGATGAA-ACAAA 8432 |||||| || || ||||| || || ||||||||||| | ||| |||| || || ||| | Sbjct 1774 TTCACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCGATAATAAATACAGA 1833 Query 8433 TAGCAGCAGCGAGCAGCGTAGGAATCATCAGGACACCGAACCAACCGACATACAGACGAT 8492 || || | | | ||||| ||||||| || || ||||| || | || ||||| | Sbjct 1834 -AGTTGCGGTCAATAAGGTAGGGATCATCAAAACGCCAAACCATCCAATGTAAAGACGGT 1892 Query 8493 TGTTGGTGGAGGTTACCCAGTTACAGAA 8520 | | |||| ||||| |||||||||||| Sbjct 1893 TTTCGGTGCTGGTTATCCAGTTACAGAA 1920 >seq2978 Length=1535 Score = 610 bits (676), Expect = 8e-170 Identities = 687/907 (76%), Gaps = 13/907 (1%) Strand=Plus/Minus Query 7534 AGCAGCAAGGTCAAGAGGGAAGTTGTGAGCATTACGCTCGT-GCATGACTTCCATGCCAA 7592 |||||| | ||| |||||||| |||||||||||||| || | |||| |||||||| |||| Sbjct 915 AGCAGCTAAGTCTAGAGGGAAATTGTGAGCATTACGTTCATTGCATAACTTCCATACCAA 856 Query 7593 GACCAGCACGGTTGAGCACGTCTGCCCAGGTGTTCAGGACACGACCTTGACCATCAATGA 7652 | ||||||||| | | || ||||| ||||| | ||||| ||||||| ||||| | Sbjct 855 GGTTAGCACGGTTAATGATATCAGCCCAAGTGTTAATTACACGGCCTTGACTATCAACTA 796 Query 7653 TGGACTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATGGTGCTAACACCAAGAGCAG 7712 || |||||||| |||||||| || |||||||| ||||| ||||| | ||| | ||||| Sbjct 795 CTGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTGATACCTAAAGCAG 736 Query 7713 TGAACCAGATGCCAACAACTGGCCATGCTGCGAGGAAGAAGTGCAGCGAACGGGAGTTGT 7772 |||||||||| || || || ||||| || || |||||||| || | ||||| ||||||| Sbjct 735 TGAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAGAGTTGT 676 Query 7773 TGAACGAAGCGTATTGGAAGATCAGACGACCAAAGTATCCGTGAGCAGCAACGATGTTGT 7832 |||| ||| ||||||||||||| || ||||| || |||||||| || ||||| || | Sbjct 675 TGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCGGCTACGATATTAT 616 Query 7833 AGGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGGGACTCAGACTCAGTGGTTT 7892 | || ||||||||||||||||| | ||||| | ||| || ||| || ||||||| Sbjct 615 AAGTTTCTTCTTCTTGACCGAATCTGTAACCTTCGTTAGCAGATTCATTTTCTGTGGTTT 556 Query 7893 CACGAACCAGAGAAGAGGTTACAAGCGAACCATGCATCGCACTGAACAGAGAACCACCAA 7952 | | | || | ||||||||| | ||||||||||| ||||| || || || || || | Sbjct 555 CCCTGATCAAACTAGAGGTTACCAAAGAACCATGCATAGCACTAAATAGGGAGCCGCCGA 496 Query 7953 AGACACCAGCGACGCCCAGCATGTGGAAGGGGTGCATCAGGATGTTGTGCTCTGCTTGGA 8012 | |||||||| ||||| |||||||| || |||||||| |||||||||||||| || |||| Sbjct 495 ATACACCAGCTACGCCTAGCATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGA 436 Query 8013 AGACAAGCATGTAGTTGAACGTACCAGAGATGCCAAGAGGCATAGCGTCAGAGAAAGAAC 8072 | |||| |||| ||||||| |||||||| || || ||||||||| | ||||| || | Sbjct 435 ATACAATCATGAAGTTGAAAGTACCAGAAATTCCTAGAGGCATACCATCAGAAAAGCTTC 376 Query 8073 CTTGACCGAAAGGATAGACGAGGAATACAGCAGATGCTGCAGCAACTGGAGCAGAGTATG 8132 ||||||| | || |||| | ||| ||||||| || || ||||| ||||| || |||| Sbjct 375 CTTGACCAATTGGGTAGATCAAGAAAACAGCAGTCGCAGCTGCAACAGGAGCTGAATATG 316 Query 8133 CTACACAGATCCAGGGACGCATACCTAGACGGTAAGAAAGTTCCCACTCACGACCCATGT 8192 | ||| ||||| || |||||||| |||||| || ||||||||||||||||||||||| Sbjct 315 CAACAGCAATCCAAGGTCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATGT 256 Query 8193 ATGCATAGATACCGATCAGGAAGTGGAAGATAACGAGTTGGAAAGGACCACC-GTTGTAG 8251 | | | ||| | | |||||| | | || |||| |||||||||| ||||| Sbjct 255 AACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCTATTGTAT 196 Query 8252 AGCCACTCA-TCAAGAGAAGCTG-CTTCCCAGATGGGATAGAAGTGGAGACCAATAGCGT 8309 | ||| ||| |||| ||| |||| ||||||| || || || || || | ||| ||||| Sbjct 195 AACCATTCATTCAACAGATGCTGCCTTCCCATATTGGGTAAAAATGCAAACCTATAGCTG 136 Query 8310 TAGAAGAAGGAACAACAGCACCAGAGATGATGTTGTTGCCATACA--TGAGCGAACCAGC 8367 ||||| ||||| || ||||| || || || ||||| ||||| | | || || |||| Sbjct 135 CAGAAGTAGGAATAATGGCACCCGAAATAATATTGTT-CCATAAAAGTAAGAGATCCAGT 77 Query 8368 GA---CGGGTTCACG-GATGCC-GTCAATGTCCACAGGAGGAG-CAGCGACGAAAGCGAC 8421 | |||||||| || || ||||| || || ||||||| |||| | ||| |||| Sbjct 76 AAAACTAGGTTCACGTAATACCTATCAATATCTACTGGAGGAGTCAGCAATGAAGGCGAT 17 Query 8422 GATGAAA 8428 || ||| Sbjct 16 AATAAAA 10 >seq20016 Length=17894 Score = 567 bits (628), Expect = 9e-157 Identities = 742/1018 (73%), Gaps = 7/1018 (1%) Strand=Plus/Minus Query 6263 AGAGCGTTGCCTCTTGGCAATACTTCTTCAGGAAATACAAAGTTTTCATGTGGTTGATCC 6322 |||||||| || | || | || || ||||| |||| || ||||||||| || ||||| Sbjct 14780 AGAGCGTTTCCACGGGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTGATCT 14721 Query 6323 ACTGGTGCCATCCAGGCACGTAGACCTTCATTCAATAGGATGTTCTTGGTATAGAACGTC 6382 | |||||||| ||||| | |||||| || ||||| || || ||||| ||||| ||| Sbjct 14720 TGAGCCGCCATCCAAGCACGAATACCTTCGTTTAATAGAATATTTTTGGTGTAGAAAGTC 14661 Query 6383 TCGAACTCTGGATCCTCCGCTGCTCTGATCTCTTGTGAAACAAAGTCATAAGCTCTAAGG 6442 || || || ||||| ||||| || | || || || ||||| |||||||| || | ||| Sbjct 14660 TCAAATTCAGGATCTTCCGCCGCGCGAATTTCCTGAGAAACGAAGTCATAGGCACGTAGG 14601 Query 6443 TTAAGTGCAAGACCAATAATACCAATGCTAGAGGTCCAAAGACCCATAACAGGAACAAAC 6502 || | || | ||| | | |||| | |||| | ||| | || || ||||| Sbjct 14600 TTCAAGGCCAAACCGACTACTCCAAGAGCACTCATCCATAAACCAGTTACCGGTACAAAT 14541 Query 6503 AGCATAAAGAAATGTAGCCAACGCTTATTGCTGAAGGCGATACCAAAGATCTGAGACCAG 6562 | |||||||||||||| |||||| |||||| || || | |||||||| || ||||| Sbjct 14540 AACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGGGACCAA 14481 Query 6563 AAACGATTAGCCGTGACCATCGAATAGGTCTCCTCTTCTTGTGTAGGCTCAAACGCCTTG 6622 || |||||||| |||||||| ||||| || || || |||| || || | ||| || | Sbjct 14480 AAGCGATTAGCGGTGACCATTGAATAAGTTTCTTCAGCTTGAGTTGGGTTAAAAGCACGG 14421 Query 6623 AAAGTATTTGATTGTTCACCATCTTCAAACAAAGTATTCTCTACAGTAGCACCGTGAATA 6682 || ||||||| |||||||||||||| |||||||| |||||||||||||| |||||| Sbjct 14420 AATGTATTTGCGCCATCACCATCTTCAAATAAAGTATTTTCTACAGTAGCACCATGAATA 14361 Query 6683 GCACAGAGCAATGCTCCACCTAAGATACCTGCTACACCCATCATATGAAA-CGGGTTGAG 6741 || || ||||| || | || || | ||| || || |||||||||||||| ||||| | Sbjct 14360 GCGCATAGCAAAGCAGCGCCCAATACACCAGCAACTCCCATCATATGAAATGGGGTTCAA 14301 Query 6742 CGTCCAGTTGTGGAAGCCCTGTAGGAAGAGTAAGAAGCGGAATATCGCTGCAACACCAAA 6801 |||||||| || || || || | ||||| | || || ||||| ||||| |||||||| Sbjct 14300 TGTCCAGTTATGAAATCCTTGAAAAAAGAGGATAAATCGAAATATAGCTGCTACACCAAA 14241 Query 6802 CGACGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATACATGAGAAAGACAGACACAAA 6861 |||||||||||||||| ||||| || || ||||| || || || ||||| ||||| Sbjct 14240 ACTAGGCGCAAAGAACCAACCAGACTGACCTAGTGGATAAATCAGGAATACAGAAACAAA 14181 Query 6862 GACAGCAATGGGACCAGAAAACGCGATTGCATTGTAGGGACGAATACCGACTAGA-CGTG 6920 || ||||| |||||||| || ||||||||||| || || || | | || ||| || | Sbjct 14180 AACGGCAATTGGACCAGAGAATGCGATTGCATTATAAGGGCGCA-ATTGAACAGATCGAG 14122 Query 6921 CGATCTCAAACTGCCGAAGCATGAAACCTATAAGGGCAAAGGCTCCGTGGAGCGCCACAA 6980 | | || || || || | |||||||||||| || | || || |||||||| || |||| Sbjct 14121 CAAGTTCGAATTGACGTAACATGAAACCTATTAGTCCGAAAGCACCGTGGAGAGCAACAA 14062 Query 6981 AAGGCCATAGTCCCCCAAGTTGGAGCCAGCGGACGAAATCTCCCTGAGCTTCTGGACCCC 7040 ||| ||| || || || | ||| ||| || |||||||| || ||||| ||||||| Sbjct 14061 AAGTCCACAGACCGCCTAATTGACACCAACGAGTAAAATCTCCTTGTGCTTCAGGACCCC 14002 Query 7041 ATAGAAGAAGTAGGGAATGTCCGAGAGCGTCAGCAGGAGTTGATACAGCAGCAGTAAGGA 7100 |||| | | || |||||| | | | | ||||||||| || || |||||||| | || Sbjct 14001 ATAGTAATAATAAAGAATGTGCTAAACTATTAGCAGGAGTAGAAACCGCAGCAGTTAAGA 13942 Query 7101 AATTACATCCCTCAAGATACGAAGAAGCAATCCCGTGAGTGTACCAGCTCGTGACGAAAG 7160 |||| || || || | ||| ||| || | || || || ||||| || || || | Sbjct 13941 AATTGCAGCCTTCCAAATAGGAACTGGCCAATCCATGGGTATACCATGAAGTTACAAAGG 13882 Query 7161 TTGTGCCCGTGAGCCAACCGCCCAGTGCCAGGTAAGCAGTAGGGAACAG-AAGAAGACCT 7219 |||| ||||||| |||||| || | || | || ||| ||| || || || ||| || Sbjct 13881 TTGTACCCGTGAACCAACCCCCTACAGCGAAATAGGCACAAGGAAAGAGCAATAAG-CCG 13823 Query 7220 GACCAACCAACAAAAACGAACCTATCAC-GCTTAAGCCAGTCATCGAGTACATCAAAC 7276 ||||| || ||||||||||| | || | | ||| ||||||||| | | ||||||| Sbjct 13822 GACCAGCCTACAAAAACGAAACGGTCCCTACGTAA-CCAGTCATCCATAATATCAAAC 13766 >seq2990 Length=15620 Score = 471 bits (522), Expect = 5e-128 Identities = 589/792 (74%), Gaps = 14/792 (2%) Strand=Plus/Minus Query 7742 GCGAGGAAGAAGT-GCAGCGAACGG-GAGTTGTTG--AACGAAG-CGTATTGG--AAGA- 7793 || |||||||| | | | ||||| ||||||||| ||| ||| | |||| | |||| Sbjct 15620 GCTAGGAAGAAATAGTAAAGAACGAAGAGTTGTTGTAAACTAAGACATATTAGGTAAGAA 15561 Query 7794 TCAG-ACGACCAAAGTAT-CCGT-GAGCAGCAACGATGTTGTAGGTCTCTTCTTCTTGAC 7850 ||| ||| ||||| || |||| |||| || ||||| || || || ||||||||||||| Sbjct 15560 TCAATACGGCCAAAATAAACCGTAGAGCGGCTACGATATTATAAGTTTCTTCTTCTTGAC 15501 Query 7851 CGAACTTATAACCATAGTTCTGGGACTCAGACTCAGTGGTTTCACGAACCAGAGAAGAGG 7910 |||| | ||||| | ||| || ||| || |||||||| | | || | ||||| Sbjct 15500 CGAATCTGTAACCTTCGTTAGCAGATTCATTTTCTGTGGTTTCCCTGATCAAACTAGAGG 15441 Query 7911 TTACAAGCGAACCATGCATCGCACTGAACAGAGAACCACCAAAGACACCAGCGACGCCCA 7970 |||| | ||||||||||| ||||| || || || || || || |||||||| ||||| | Sbjct 15440 TTACCAAAGAACCATGCATAGCACTAAATAGGGAGCCGCCGAATACACCAGCTACGCCTA 15381 Query 7971 GCATGTGGAAGGGGTGCATCAGGATGTTGTGCTCTGCTTGGAAGACAAGCATGTAGTTGA 8030 ||||||| || |||||||| |||||||||||||| || ||||| |||| |||| |||||| Sbjct 15380 GCATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACAATCATGAAGTTGA 15321 Query 8031 ACGTACCAGAGATGCCAAGAGGCATAGCGTCAGAGAAAGAACCTTGACCGAAAGGATAGA 8090 | |||||||| || || ||||||||| | ||||| || |||||||| | || |||| Sbjct 15320 AAGTACCAGAAATTCCTAGAGGCATACCATCAGAAAAGCTTCCTTGACCAATTGGGTAGA 15261 Query 8091 CGAGGAATACAGCAGATGCTGCAGCAACTGGAGCAGAGTATGCTACACAGATCCAGGGAC 8150 | ||| ||||||| || || ||||| ||||| || ||||| ||| ||||| || | Sbjct 15260 TCAAGAAAACAGCAGTCGCAGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGTC 15201 Query 8151 GCATACCTAGACGGTAAGAAAGTT-CCCACTCACGACCCATGTATGCATAGATACCGATC 8209 ||||||| |||||| || ||||| ||||||||||||||||||| | | ||| | Sbjct 15200 GCATACCCAGACGGAAACTAAGTTCCCCACTCACGACCCATGTAACAAGCTACACCAAGT 15141 Query 8210 AGGAAGTGGAAGATAACGAGTTGGAAAGGACCACCGTTGTAGAGCCACTCATCAAGAGAA 8269 | |||||| | | || |||| |||||||||| ||||| | ||| ||||||| ||| Sbjct 15140 AAGAAGTGTAGAACAATTAGTTCATAAGGACCACCATTGTATAACCATTCATCAACAGAT 15081 Query 8270 GCTGCTTCCCAGATGGGATAGAAGTGGAGACCAATAGCGTTAGAAGAAGGAACAACAGCA 8329 ||||||||||| || || || || || | ||| ||||| ||||| ||||| || ||| Sbjct 15080 GCTGCTTCCCATATTGGGTAAAAATGCAAACCTATAGCTGCAGAAGTAGGAATAATGGCA 15021 Query 8330 CCAGAGATGATGTTGTTGCCATACATGAGCGAACCAGCGACGGGTTCACGGATGCCGTCA 8389 || || || || ||||| ||||| | || || |||| || |||||||| || || ||| Sbjct 15020 CCCGAAATAATATTGTTTCCATAAAGTAGAGATCCAGAAACAGGTTCACGAATACCATCA 14961 Query 8390 ATGTCCACAGGAGGAGCAGCGACGAAAGCGACGATGAA-ACAAATAGCAGCAGCGAGCAG 8448 || || || ||||||||||| | ||| |||| || || ||| | || || | | | Sbjct 14960 ATATCTACTGGAGGAGCAGCAATGAAGGCGATAATAAATACAGA-AGTTGCGGTCAATAA 14902 Query 8449 CGTAGGAATCATCAGGACACCGAACCAACCGACATACAGACGATTGTTGGTGGAGGTTAC 8508 ||||| ||||||| || || ||||| || | || ||||| || | |||| ||||| Sbjct 14901 GGTAGGGATCATCAAAACGCCAAACCATCCAATGTAAAGACGGTTTTCGGTGCTGGTTAT 14842 Query 8509 CCAGTTACAGAA 8520 |||||||||||| Sbjct 14841 CCAGTTACAGAA 14830 >seq2982 Length=1363 Score = 187 bits (206), Expect = 3e-42 Identities = 282/393 (72%), Gaps = 6/393 (2%) Strand=Plus/Plus Query 6263 AGAGCGTTGCCTCTTGGCAATACTTCTTCAGGAAATACAAAGTTTTCATGTGGTTGATCC 6322 |||||||| || | || | || || ||||| |||| || ||||||||| || ||||| Sbjct 972 AGAGCGTTTCCACGGGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTGATCT 1031 Query 6323 ACTGGTGCCATCCAGGCACGTAGACCTTCATTCAATAGGATGTTCTTGGTATAGAACGTC 6382 | |||||||| ||||| | |||||| || ||||| || || ||||| ||||| ||| Sbjct 1032 TGAGCCGCCATCCAAGCACGAATACCTTCGTTTAATAGAATATTTTTGGTGTAGAAAGTC 1091 Query 6383 TCGAACTCTGGATCCTCCGCTGCTCTGATCTCTTGTGAAACAAAGTCATAAGCTCTAAGG 6442 || || || ||||| ||||| || | || || || ||||| |||||||| || | ||| Sbjct 1092 TCAAATTCAGGATCTTCCGCCGCGCGAATTTCCTGAGAAACGAAGTCATAGGCACGTAGG 1151 Query 6443 TTAAGTGCAAGACCAATAATACCAATGCTAGAGGTCCAAAGACCCATAACAGGAACAAAC 6502 || | || | ||| | | |||| | |||| | ||| | || || ||||| Sbjct 1152 TTCAAGGCCAAACCGACTACTCCAAGAGCACTCATCCATAAACCAGTTACCGGTACAAAT 1211 Query 6503 AGCATAAAGAAATGTAGCCAACGCTTATTGCTGAAGGCGATACCAAAGATCTGAGACCAG 6562 | |||||||||||||| |||||| ||||| || || | |||||||| || ||||| Sbjct 1212 AACATAAAGAAATGTAACCAACGTTTATTAGGAAAAGCAACCCCAAAGAT-TG-GACCAA 1269 Query 6563 AAACGATTAGCCGT-GACCA-TCGAATAGGTCTCCTC-TTCTTGTGTAGGCTCAAACGCC 6619 | ||||||||| || ||||| | ||||| || || || ||||| || || | ||| || Sbjct 1270 AGACGATTAGCGGTAGACCATTAGAATAAGTTTCTTCAGTCTTGAGTTGGGTTAAAAGCA 1329 Query 6620 TTGAAAGTATTTGATTGTTCACCATCTT-CAAA 6651 ||| ||||||| |||||||||| |||| Sbjct 1330 CGGAATGTATTTGCGCCATCACCATCTTACAAA 1362 >seq15940 Length=20296 Score = 172 bits (190), Expect = 7e-38 Identities = 241/334 (72%), Gaps = 12/334 (4%) Strand=Plus/Minus Query 6263 AGAGCGTTGCCTCTTGGCAATACTTCTTCAGGAAATACAAAGTTTT-CATGTGGTTGATC 6321 |||||||| || | || | || || ||||| |||| || ||||| |||| || ||||| Sbjct 20098 AGAGCGTTTCCACGGGGTAGAACCTCCTCAGGGAATATAAGGTTTTTCATGAGGCTGATC 20039 Query 6322 CACTGGTGCCATCCAGGCACGTAGACCTTCATTCAATAGGATGTTCTT-GGTATAGAACG 6380 | |||||||| ||||| | |||||| || ||||| || || || ||| ||||| | Sbjct 20038 TTGAGCCGCCATCCAAGCACGAATACCTTCGTTTAATAGAATATTTTTTGGTGTAGAAAG 19979 Query 6381 TCTCGAACT-CTGGATCCTCCGCTGCTCTGATCTCTTGTGAAACAAAGTCATAAGCTCTA 6439 |||| || | | ||||| ||||| || | || || || ||||| |||||||| || | Sbjct 19978 TCTCAAAATTCAGGATCTTCCGCCGCGCGAATTTCCTGAGAAACGAAGTCATAGGCACGT 19919 Query 6440 AGGTTAAGTGCAAGACCAATAATACCAATGCTAGAGG-----TCCAAAGACCCATAACAG 6494 ||||| | || | ||| | | |||| |||| |||| | ||| | || | Sbjct 19918 AGGTTCAAGGCCAAACCGACTACTCCAA----AGAGCACTCATCCATAAACCAGTTACCG 19863 Query 6495 GAACAAACAGCATAAAGAAATGTAGCCAACGCTTATTGCTGAAGGCGATACCAAAGATCT 6554 | ||||| | |||||||||||||| |||||| |||||| || || | |||||||| | Sbjct 19862 GTACAAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTT 19803 Query 6555 GAGACCAGAAACGATTAGCCGTGACCATCGAATA 6588 | ||||| || |||||||| |||||||| ||||| Sbjct 19802 GGGACCAAAAGCGATTAGCGGTGACCATTGAATA 19769 >seq7755 Length=16682 Score = 136 bits (150), Expect = 5e-27 Identities = 162/221 (73%), Gaps = 8/221 (4%) Strand=Plus/Minus Query 6477 TCCAAAGACCCATAACAGGAACAAACAGCATAAAGAAATGTAGCCAACGCTTATTGCTGA 6536 |||| | ||| | || || ||||| | |||||||||||||| |||||| |||||| | Sbjct 3778 TCCATAAACCAGTTACCGGTACAAATAACATAAAGAAATGTAACCAACGTTTATTGGAAA 3719 Query 6537 AGGCGATACCAAAGATCTGAGACCAGAAACGATTAGCCGTGACCATCGAATAGGTCTCCT 6596 | || | || | ||||| || |||||||| |||||||| ||||| || || | Sbjct 3718 AAGCAACCCC--------GGGACCAAAAGCGATTAGCAGTGACCATTGAATAAGTTTCTT 3667 Query 6597 CTTCTTGTGTAGGCTCAAACGCCTTGAAAGTATTTGATTGTTCACCATCTTCAAACAAAG 6656 | |||| || || | ||| || ||| ||||||| |||||||||||||| |||| Sbjct 3666 CAGCTTGAGTTGGGTTAAAAGCACGGAATGTATTTGCGCCATCACCATCTTCAAATAAAG 3607 Query 6657 TATTCTCTACAGTAGCACCGTGAATAGCACAGAGCAATGCT 6697 |||| | ||| |||||||| |||||||| || |||| ||| Sbjct 3606 TATTTTATACGGTAGCACCCTGAATAGCGCATGGCAAAGCT 3566 >seq13577 Length=50240 Score = 114 bits (126), Expect = 2e-20 Identities = 241/366 (66%), Gaps = 35/366 (10%) Strand=Plus/Plus Query 6328 TGCCATCCAGGCACGTAGACCTTCATTCAATAGGATGTTCTTGGTATAGAACGTCTCGAA 6387 ||||||||| |||| | ||||| || ||||| || || ||||| || || ||||| || Sbjct 19169 TGCCATCCAAGCACCAATTCCTTCGTTTAATAGAATATTTTTGGTGTATAAAGTCTCAAA 19228 Query 6388 CTCTGGATCCTCCGCTGCTCTGATCTCTTGTGAAACAAAGTCATAAGCTCTAAGGTTAAG 6447 || ||||| | ||| | | || || || ||||| |||||||| || | ||||||| Sbjct 19229 TTCAGGATCTTTCGCCACGCGAATTTCCTGAGAAACGAAGTCATAGGCACGTAGGTTAAA 19288 Query 6448 TGCAAGACCAATAATACCAATGCTAGAGGTCCAAAGACCCATAACAGGAACAAACAGCAT 6507 || | || | | |||| | |||| | ||| | || || ||||| | || Sbjct 19289 GGCCAAACTGACTACTCCAAGAGCATTCATCCATAAACCAGTTACCGGTACAAATAAGAT 19348 Query 6508 AAAGAAATGTAGCCAACGCTTATTGCTGAAGGCGATACCAAAGATCTGAGACCAGAAACG 6567 ||||||||||| |||||| |||||| |||| Sbjct 19349 AAAGAAATGTAACCAACGTTTATTG-----------------------------GAAA-- 19377 Query 6568 ATTAGCCGTGACCATCGAATAGGTCTCCTCTTCTTGTGTAGGCTCAAACGCCTTGAAAGT 6627 ||| || ||||| ||||| || || || |||| || | | ||| | | ||| || Sbjct 19378 --AAGCAGTCACCATTGAATAAGTTTCTTCAGCTTGAGTTGAGTTAAAAACATGGAATGT 19435 Query 6628 ATTTGATTGTTCACCATCTTCAAACAAAGTATTCTCTACAGTAGCACCGTGAATAGCACA 6687 | | | |||||||||||||| |||||||| |||||||||||||| |||||||| || Sbjct 19436 A--AGCGTCATCACCATCTTCAAATAAAGTATTTTCTACAGTAGCACCATGAATAGCGCA 19493 Query 6688 GAGCAA 6693 ||||| Sbjct 19494 TAGCAA 19499 >seq12569 Length=659 Score = 107 bits (118), Expect = 2e-18 Identities = 187/264 (71%), Gaps = 6/264 (2%) Strand=Plus/Minus Query 7016 AAATCTCCCTGAGCTTCTGGACCCCA-TAGAAGAAGTAGGGAATGTCCGAGAGCGTCAGC 7074 |||| ||| || ||||| |||||||| ||| | | || |||||| | | | | ||| Sbjct 642 AAAT-TCCTTGTGCTTCAGGACCCCACTAGTAATAATAAAGAATGTGCTAAACTATTAGC 584 Query 7075 AGGAGTTGATACAGCAGCAGTAAGGAAATTACATCCCTCAAGATACGAAGAAGCAATCCC 7134 |||||| || || |||||||| | |||||| || || || | ||| ||| || | || Sbjct 583 AGGAGTAGAAACCGCAGCAGTTAAGAAATTGCAGCCTTCCAAATAGGAACTGGCCAATCC 524 Query 7135 GTGAGTGTACCAGCTCGTGACGAAAGTTGTGCCCGTGAGCCAACCGCCCAGTGCCAGGTA 7194 || || ||||| || || || ||||| ||||||| |||||| || | || | || Sbjct 523 ATGGGTATACCATGAAGTTACAAAGGTTGTACCCGTGAACCAACCCCCTACAGCGAAATA 464 Query 7195 AGCAGTAGGGAACAG-AAGAAGACCTGACCAACCAACAAAAACGAACCTATCAC-GCTTA 7252 ||| ||| || || || ||| || ||||| || ||||||||||| | || | | || Sbjct 463 GGCACAAGGAAAGAGCAATAAG-CCGGACCAGCCTACAAAAACGAAACGGTCCCTACGTA 405 Query 7253 AGCCAGTCATCGAGTACATCAAAC 7276 | ||||||||| | | ||||||| Sbjct 404 A-CCAGTCATCCATAATATCAAAC 382 >seq6618 Length=24737 Score = 100 bits (110), Expect = 4e-16 Identities = 88/110 (80%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 6638 TCACCATCTTCAAACAAAGTATTCTCTACAGTAGCACCGTGAATAGCACAGAGCAATGCT 6697 |||||||||||||| |||||||| |||| |||||||| ||||||| || ||||| || Sbjct 23991 TCACCATCTTCAAATAAAGTATTTTCTATGGTAGCACCATGAATAGTGCATAGCAAAGCA 24050 Query 6698 CCACCTAAGATACCTGCTACACCCATCATATGAAACGGGTTGAGCGTCCA 6747 | || || | ||| || || |||||||||||||| ||||| | ||||| Sbjct 24051 GCGCCCAATACACCAGCAACTCCCATCATATGAAATGGGTTCAATGTCCA 24100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 621968685558000