Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Conyza_20canadensis_20[genbank_20GCA_5F000775935.1_202014-11-13]
20,075 sequences; 326,165,195 total letters
Query= NC_015285.1
Length=174285
Score E
Sequences producing significant alignments: (Bits) Value
seq20014 581 4e-161
seq20016 518 4e-142
seq2978 486 2e-132
seq2990 376 3e-99
seq15940 136 4e-27
seq2982 136 4e-27
seq12569 113 5e-20
seq7755 113 5e-20
seq6618 95.1 1e-14
seq8649 91.5 2e-13
>seq20014
Length=5322
Score = 581 bits (644), Expect = 4e-161
Identities = 728/991 (73%), Gaps = 8/991 (1%)
Strand=Plus/Minus
Query 162385 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 162444
||||| | ||| |||| ||| | ||||| || || | || ||||| ||||| ||
Sbjct 1920 TTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGCGTTTTG 1861
Query 162445 ATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 162503
||||| || || | ||| | ||||| ||||| || || |||||||| | ||||||||
Sbjct 1860 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTCC 1802
Query 162504 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 162563
|| || || || || || || |||||||| || |||| || || | ||||| |||||
Sbjct 1801 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAA 1742
Query 162564 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 162623
|| || || ||||| || |||| |||| || || ||| | || || || || ||
Sbjct 1741 TATTATTTCGGGTGCCATTATTCCTACTTCTGCAGCTATAGGTTTGCATTTTTACCCAAT 1682
Query 162624 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 162683
|||||||| ||||| ||||||| ||| | || || |||||||||| |||| | ||
Sbjct 1681 ATGGGAAGCAGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAACTAATTGT 1622
Query 162684 ATTCCACTTCCTGATCGGCATCTATGCCTACATGGGACGTGAATGGGAACTCTCTTACCG 162743
| |||||| | | || | | |||||||| ||||| |||||||| || |||
Sbjct 1621 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCG 1562
Query 162744 TCTTGGTATGCGTCCATGGATCTGC-GTAGCATACTCTGCACCTGTTGCAGCAGCATCGG 162802
||| |||||||| || ||||| ||| || ||||| || || ||||||||||| || | |
Sbjct 1561 TCTGGGTATGCGACCTTGGAT-TGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTG 1503
Query 162803 CAGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCCTTGGGTA 162862
| || ||| || |||| || | |||||||| || ||||| | ||||| | || |
Sbjct 1502 CTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAA 1443
Query 162863 TCAGTGGTACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTGATGCATC 162922
| |||||| ||||||| |||| |||| ||||| || ||||||||||| || ||||| |
Sbjct 1442 TTTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACC 1383
Query 162923 CCTTCCACATGTTGGGTGTCGCAGGTGTCTTCGGTGGTTCACTGTTCAGTGCAATGCACG 162982
| || |||||| | || || || ||||| ||||| || || || || ||||| ||||| |
Sbjct 1382 CATTTCACATGCTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATG 1323
Query 162983 GTTCTTTGGTTACATCTTCACTCGTCCGTGAGACGACTGAAACTGAGTCACAGAACTATG 163042
|||||||||| || ||| | || | || || || |||| ||| || ||| | |
Sbjct 1322 GTTCTTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAACGAAG 1263
Query 163043 GTTACAAGTTCGGTCAAGAAGAAGAGACATACAACATCGTCGCAGCCCATGGTTACTTCG 163102
|||||| ||||||||||||||||| || || || ||||| || || || ||||| || |
Sbjct 1262 GTTACAGATTCGGTCAAGAAGAAGAAACTTATAATATCGTAGCCGCTCACGGTTATTTTG 1203
Query 163103 GTCGTTTGATCTTCCAATATGCATCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTG 163162
| || ||||||||||||||||| ||||||||||| ||||| || || |||||||| |
Sbjct 1202 GCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACATTTCTTCCTAG 1143
Query 163163 CTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCA--ACCATGGCATT 163220
|||| |||||||| || || ||||||||||| || | || | ||| || ||||| ||
Sbjct 1142 CTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGG--TATCAGCACTATGGCTTT 1085
Query 163221 CAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAA 163280
|||||| || |||||||| |||||||| || | ||||| |||| || ||||| | ||
Sbjct 1084 CAACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGCCGTGTAATTAA 1025
Query 163281 CACCTGGGCAGACGTTCTGAACCGTGCAGGTTTGGGTATGGAAGTTATGCACGAGCGCAA 163340
||| ||||| || | | |||||||| | ||||||||||||||||| || || ||
Sbjct 1024 CACTTGGGCTGATATCATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAA 965
Query 163341 TGCTCACAACTTCCCACTTGACCTGGCAGCT 163371
||||||||| ||||| || ||| | || |||
Sbjct 964 TGCTCACAATTTCCCTCTAGACTTAGCTGCT 934
>seq20016
Length=17894
Score = 518 bits (574), Expect = 4e-142
Identities = 739/1026 (72%), Gaps = 13/1026 (1%)
Strand=Plus/Plus
Query 163620 GTTTGATGTCCTGGATGACTGGCTTAAGC-GCGATCGTTTCGTATTTATTGGTTGGTCTG 163678
||||||| | ||||||||||| ||| | | || |||||||| ||| | || ||||| |
Sbjct 13766 GTTTGATATTATGGATGACTGG-TTACGTAGGGACCGTTTCGTTTTTGTAGGCTGGTCCG 13824
Query 163679 GATTACTACTTCTTCCCACTGCTTATATGGCAATTGGTGGCTGGCTTACTGGTACAACTT 163738
| ||| | || |||| ||| ||| | || | || || ||| | || |||||||| |
Sbjct 13825 GCTTATTGCTCTTTCCTTGTGCCTATTTCGCTGTAGGGGGTTGGTTCACGGGTACAACCT 13884
Query 163739 TCGTTACGTCGTGGTACACCCATGGACTGGCAACTTCCTATCTTGAGGG-TGCTAATTTT 163797
| || || || ||||| ||||||||| |||| | ||||||| | || || ||| |||||
Sbjct 13885 TTGTAACTTCATGGTATACCCATGGATTGGCCAGTTCCTATTTGGAAGGCTGC-AATTTC 13943
Query 163798 CTCACAGCGGCTGTGTCAACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTT-CTCTG 163856
| || || || || || || |||||| | | | | |||||| || || || || ||
Sbjct 13944 TTAACTGCTGCGGTTTCTACTCCTGCTAATAGTTTAGCACATTCT-TTATTATTACTATG 14002
Query 163857 GGGTCCTGAGGCTCAGGGCGATTTCGTCCGCTGGATCCAACTTGGGGGACTCTGGAATTT 163916
||||||||| || || || ||||| || ||| ||| | || || || |||| |||
Sbjct 14003 GGGTCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTT 14062
Query 163917 TGTGGCACTCCACGGAGCCTTTGCTCTCATTGGTTTCATGCTTCGGCAATTTGAACTTGC 163976
||| || |||||||| || || | || || ||||||||| | || ||||| ||||||||
Sbjct 14063 TGTTGCTCTCCACGGTGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTCGAACTTGC 14122
Query 163977 TCGC-CTGATTGGAATCAGACCCTACAATGCGATTGCTTTCTCTGGTCCTATTGCTGTCT 164035
||| ||| || | | | || || ||||| || || ||||||||||| ||||| || |
Sbjct 14123 TCGATCTG-TTCAATTGCGCCCTTATAATGCAATCGCATTCTCTGGTCCAATTGCCGTTT 14181
Query 164036 TCGTTAGTGTCTTTCTCATCTACCCTCTGGGTCAATCAAGTTGGTTCTTCGCTCCATCTT 164095
| ||| ||| || || || || || || ||||| || |||||||||| || || ||
Sbjct 14182 TTGTTTCTGTATTCCTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTT 14241
Query 164096 TTGGAGTGGCAGCAATCTTCAGATTCCTCTTATTCCTTCAAGGATTTCATAACTGGACTT 164155
|||| || ||||| || || |||| || | || |||||||||||||||||||||| |
Sbjct 14242 TTGGTGTAGCAGCTATATTTCGATTTATCCTCTTTTTTCAAGGATTTCATAACTGGACAT 14301
Query 164156 TGAACCCC-TTCCATATGATGGGAGTTGCTGGTATACTAGGCGGAGCATTGCTATCTGCT 164214
|||||||| || ||||||||||||||||||||| || | |||| || ||||||| |||
Sbjct 14302 TGAACCCCATTTCATATGATGGGAGTTGCTGGTGTATTGGGCGCTGCTTTGCTATGCGCT 14361
Query 164215 ATTCACGGAGTCACAGTTGAAAATACATTGTATGAAGATGGAGAACAAGCAAACACCTTT 164274
||||| || | || || |||||||| || | ||||||||| || ||||| || ||
Sbjct 14362 ATTCATGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGCGCAAATACATTC 14421
Query 164275 AAGGCGTTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTC 164334
|| ||| | | || || | ||||| |||||||| |||||||| || || |||||
Sbjct 14422 CGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTT 14481
Query 164335 TGGTCGCAGATCTTCGGTGTTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTG 164394
||||| || ||||| || ||||| ||||| || || || ||| | ||||| || |||||
Sbjct 14482 TGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTA 14541
Query 164395 TTTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGCCTTGCTCTCAAT 164454
||||| || || | ||| |||||| || |||| | | || | || | ||
Sbjct 14542 TTTGTACCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTTTGGCCTTGAAC 14601
Query 164455 CTTCGTGCTTACGATTTTGTAAGTCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTCGAG 164514
|| ||||| || || || || ||| || ||| | || || ||||||||||| || |||
Sbjct 14602 CTACGTGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCGGAAGATCCTGAATTTGAG 14661
Query 164515 ACTTTCTATACCAAGAACATCTTATTGAACGAAGGACTCCGTGCATGGTTAGCACCAGTT 164574
|||||||| ||||| || || |||| |||||||| | ||||| ||| | || |
Sbjct 14662 ACTTTCTACACCAAAAATATTCTATTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAA 14721
Query 164575 GACCAGC--CAGGAGAACGGTTTGTCTTCCCAGAAGAAGTACTGCCGAGAGGTAATGCGC 164632
|| |||| || || ||| || | ||||| || || || || || | || || || |
Sbjct 14722 GATCAGCCTCATGAAAAC--CTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTC 14779
Query 164633 TTTAAT 164638
||||||
Sbjct 14780 TTTAAT 14785
>seq2978
Length=1535
Score = 486 bits (538), Expect = 2e-132
Identities = 664/910 (73%), Gaps = 19/910 (2%)
Strand=Plus/Plus
Query 162477 TTTCATCGTCGCCTTCGTCGCTG-CTCCCCCTGTGGACATCGAC-GGCATC-CGTGAACC 162533
||| || |||||||| | |||| |||| || || || || || || || ||||||||
Sbjct 10 TTTTATTATCGCCTTCATTGCTGACTCCTCCAGTAGATATTGATAGGTATTACGTGAACC 69
Query 162534 CG---TCGCTGGTTCACTCA--TGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCA 162588
| |||| || || | | ||||| ||||| || || || ||||| || ||||
Sbjct 70 TAGTTTTACTGGATCTCTTACTTTTATGG-AACAATATTATTTCGGGTGCCATTATTCCT 128
Query 162589 TCTTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCC-GCATCACTTGA-TG 162646
|||| || || ||| | || || || || || ||||||| | ||||| |||| ||
Sbjct 129 ACTTCTGCAGCTATAGGTTTGCATTTTTACCCAATATGGGAAGGCAGCATCTGTTGAATG 188
Query 162647 AGTGGCTGTATAAC-GGTGGTCCTTTCCAACTCGTAGTATTCCACTTCCTGATCGGCATC 162705
| ||| | || || |||||||||| |||| | || | |||||| | | || |
Sbjct 189 AATGGTTATACAATAGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTA 248
Query 162706 TATGCCTACATGGGACGTGAATGGGAACTCTCTTACCGTCTTGGTATGCGTCCATGGATC 162765
| |||||||| ||||| |||||||| || |||||| |||||||| || |||||
Sbjct 249 GCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGACCTTGGAT- 307
Query 162766 TGC-GTAGCATACTCTGCACCTGTTGCAGCAGCATCGGCAGTCTTCCTGGTCTATCCTTT 162824
||| || ||||| || || ||||||||||| || | || || ||| || |||| || |
Sbjct 308 TGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTTGATCTACCCAAT 367
Query 162825 CGGTCAAGGTTCTTTCTCTGACGCAATGCCCTTGGGTATCAGTGGTACATTCAACTACAT 162884
|||||||| || ||||| | ||||| | || || |||||| ||||||| |||
Sbjct 368 TGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTCAT 427
Query 162885 GCTTGTCTTCCAAGCAGAGCACAACATTCTGATGCATCCCTTCCACATGTTGGGTGTCGC 162944
| |||| ||||| || ||||||||||| || ||||| || || |||||| | || || ||
Sbjct 428 GATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGCTAGGCGTAGC 487
Query 162945 AGGTGTCTTCGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGGTTACATCTTCACT 163004
||||| ||||| || || || || ||||| ||||| ||||||||||| || ||| |
Sbjct 488 TGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTT 547
Query 163005 CGTCCGTGAGACGACTGAAACTGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGA 163064
|| | || || || |||| ||| || ||| | ||||||| ||||||||||||||
Sbjct 548 GATCAGGGAAACCACAGAAAATGAATCTGCTAACGAAGGTTACAGATTCGGTCAAGAAGA 607
Query 163065 AGAGACATACAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATATGC 163124
||| || || || ||||| || || || ||||| || || || |||||||||||||||||
Sbjct 608 AGAAACTTATAATATCGTAGCCGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGC 667
Query 163125 ATCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCAT 163184
||||||||||| ||||| || || |||||||| ||||| |||||||| || || ||
Sbjct 668 TAGTTTCAACAACTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTAT 727
Query 163185 CTGGTTCACCGCCCTTGGCGTGTCA--ACCATGGCATTCAACCTGAACGGTTTCAACTTC 163242
||||||||| | ||| || ||| || ||||| |||||||| || |||||||| |||
Sbjct 728 CTGGTTCACTG--CTTTAGGTATCAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTC 785
Query 163243 AACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGACGTTCTGAAC 163302
||||| || | ||||| |||| || ||||| | ||||| ||||| || | | |||
Sbjct 786 AACCAATCAGTAGTTGATAGTCAAGGCCGTGTAATTAACACTTGGGCTGATATCATTAAC 845
Query 163303 CGTGCAGGTTTGGGTATGGAAGTTATGC-ACGAGCGCAATGCTCACAACTTCCCACTTGA 163361
||||| | |||||||||||||||| | || || ||||||||||| ||||| || ||
Sbjct 846 CGTGCTAACCTTGGTATGGAAGTTATGCAATGAACGTAATGCTCACAATTTCCCTCTAGA 905
Query 163362 CCTGGCAGCT 163371
| | || |||
Sbjct 906 CTTAGCTGCT 915
>seq2990
Length=15620
Score = 376 bits (416), Expect = 3e-99
Identities = 569/793 (72%), Gaps = 16/793 (2%)
Strand=Plus/Plus
Query 162385 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 162444
||||| | ||| |||| ||| | ||||| || || | || ||||| ||||| ||
Sbjct 14830 TTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGCGTTTTG 14889
Query 162445 ATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 162503
||||| || || | ||| | ||||| ||||| || || |||||||| | ||||||||
Sbjct 14890 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTCC 14948
Query 162504 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 162563
|| || || || || || || |||||||| || |||| || || | ||||| |||||
Sbjct 14949 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAA 15008
Query 162564 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 162623
|| || || ||||| || |||| |||| || || ||| | || || || || ||
Sbjct 15009 TATTATTTCGGGTGCCATTATTCCTACTTCTGCAGCTATAGGTTTGCATTTTTACCCAAT 15068
Query 162624 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 162683
|||||||| ||||| ||||||| ||| | || || |||||||||| |||| | ||
Sbjct 15069 ATGGGAAGCAGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAACTAATTGT 15128
Query 162684 ATTCCACTTCCTGATCGGCATCTATGCCTACATGGGACGTGAATGGG-AACTCTCTTACC 162742
| |||||| | | || | | |||||||| ||||| |||| |||| || ||
Sbjct 15129 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGGAACTTAGTTTCC 15188
Query 162743 GTCTTGGTATGCGTCCATGGATCTGC-GTAGCATACTCTGCACCTGTTGCAGCAGCATCG 162801
|||| |||||||| || ||||| ||| || ||||| || || ||||||||||| || |
Sbjct 15189 GTCTGGGTATGCGACCTTGGAT-TGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACT 15247
Query 162802 GCAGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCCTTGGGT 162861
|| || ||| || |||| || | |||||||| || ||||| | ||||| | ||
Sbjct 15248 GCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGA 15307
Query 162862 ATCAGTGGTACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTGATGCAT 162921
|| |||||| ||||||| |||| |||| ||||| || ||||||||||| || |||||
Sbjct 15308 ATTTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCAC 15367
Query 162922 CCCTTCCACATGTTGGGTGTCGCAGGTGTCTTCGGTGGTTCACTGTTCAGTGCAATGCAC 162981
|| || |||||| | || || || ||||| ||||| || || || || ||||| |||||
Sbjct 15368 CCATTTCACATGCTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCAT 15427
Query 162982 GGTTCTTTGGTTACATCTTCACTCGTCCGTGAGACGACTGAAACTGAGTCACAGAACTAT 163041
||||||||||| || ||| | || | || || || |||| ||| || ||| |
Sbjct 15428 GGTTCTTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAACGAA 15487
Query 163042 GGTTACAAGTTCGGTCAAGAAGAAGAGACATACAACATCGTCGCAGC-CCATGG-TTACT 163099
||||||| ||||||||||||||||| || || || ||||| || || | | || ||| |
Sbjct 15488 GGTTACAGATTCGGTCAAGAAGAAGAAACTTATAATATCGTAGCCGCTCTACGGTTTATT 15547
Query 163100 TCGGTCGT-TTGA-TCTT--CCAATATGCATCA---TTCAACAACTC-CCGTTCCTTGC- 163150
| || ||| |||| |||| | |||||| | | | ||||||||| ||||| || |
Sbjct 15548 TTGGCCGTATTGATTCTTACCTAATATGTCTTAGTTTACAACAACTCTTCGTTCTTTACT 15607
Query 163151 ACTTCTTCCTTGC 163163
| |||||||| ||
Sbjct 15608 ATTTCTTCCTAGC 15620
>seq15940
Length=20296
Score = 136 bits (150), Expect = 4e-27
Identities = 189/260 (73%), Gaps = 5/260 (2%)
Strand=Plus/Plus
Query 164307 TTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTGTTGCGTTTTCTAA 164366
|||||| |||||||| || || ||||| ||||| || ||||| || ||||| ||||| ||
Sbjct 19768 TTATTCAATGGTCACCGCTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAA 19827
Query 164367 CAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACA--TCC 164424
|| || ||| | ||||| || ||||| ||||| || || | ||| |||||| | |
Sbjct 19828 TAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGC 19887
Query 164425 TCTATTGGCATTATTGGCCTTGCTCTCAATCTTCGTGCTTACGATTTTGTAAGTCAAGAG 164484
||| |||| | | || | || | || || ||||| || || || || ||| ||
Sbjct 19888 TCT-TTGGAGTAGTCGGTTTGGCCTTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAA 19946
Query 164485 ATTAGAGCAGCAGAAGATCCTG-AGTTCGAGACTTTCTATACC-AAGAACATCTTATTGA 164542
||| | || || |||||||||| | || ||||||||||| ||| || || || |||| |
Sbjct 19947 ATTCGCGCGGCGGAAGATCCTGAATTTTGAGACTTTCTACACCAAAAAATATTCTATTAA 20006
Query 164543 ACGAAGGACTCCGTGCATGG 164562
||||||| | ||||| |||
Sbjct 20007 ACGAAGGTATTCGTGCTTGG 20026
>seq2982
Length=1363
Score = 136 bits (150), Expect = 4e-27
Identities = 241/344 (70%), Gaps = 8/344 (2%)
Strand=Plus/Minus
Query 164299 GAAGAGACTTATTCTA-TGGTC-ACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTGTTG 164356
||||| |||||||||| ||||| || || || || | ||||| || ||||| || ||||
Sbjct 1306 GAAGAAACTTATTCTAATGGTCTACCGCTAATCGTCTTTGGTC-CA-ATCTTTGGGGTTG 1249
Query 164357 CGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTAT 164416
| ||| |||| || || ||| | ||||| || ||||| ||||| || || | ||| |||
Sbjct 1248 CTTTTCCTAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTAT 1189
Query 164417 GGACATCCTCTATTGGCATTATTGGCCTTGCTCTCAATCTTCGTGCTTACGATTTTGTAA 164476
||| || |||| | | || | || | || || ||||| || || || ||
Sbjct 1188 GGATGAGTGCTCTTGGAGTAGTCGGTTTGGCCTTGAACCTACGTGCCTATGACTTCGTTT 1129
Query 164477 GTCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTCGAGACTTTCTATACCAAGAACATCT 164536
||| || ||| | || || ||||||||||| || ||||||||||| ||||| || ||
Sbjct 1128 CTCAGGAAATTCGCGCGGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTC 1069
Query 164537 TATTGAACGAAGGACTCCGTGCATGGTTAGCACCAGTTGACCAGC--CAGGAGAACGGTT 164594
|||| |||||||| | ||||| ||| | || | || |||| || || ||| |
Sbjct 1068 TATTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAAC--CT 1011
Query 164595 TGTCTTCCCAGAAGAAGTACTGCCGAGAGGTAATGCGCTTTAAT 164638
| | ||||| || || || || || | || || || |||||||
Sbjct 1010 TATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAAT 967
>seq12569
Length=659
Score = 113 bits (124), Expect = 5e-20
Identities = 186/259 (72%), Gaps = 7/259 (3%)
Strand=Plus/Plus
Query 163620 GTTTGATGTCCTGGATGACTGGCTTAAG-CGCGATCGTTTCGTATTTATTGGTTGGTCTG 163678
||||||| | ||||||||||| ||| | | || |||||||| ||| | || ||||| |
Sbjct 382 GTTTGATATTATGGATGACTGG-TTACGTAGGGACCGTTTCGTTTTTGTAGGCTGGTCCG 440
Query 163679 GATTACTACTTCTTCCCACTGCTTATATGGCAATTGGTGGCTGGCTTACTGGTACAACTT 163738
| ||| | || |||| ||| ||| | || | || || ||| | || |||||||| |
Sbjct 441 GCTTATTGCTCTTTCCTTGTGCCTATTTCGCTGTAGGGGGTTGGTTCACGGGTACAACCT 500
Query 163739 TCGTTACGTCGTGGTACACCCATGGACTGGCAACTTCCTATCTTG-AGGGTGCTAATTTT 163797
| || || || ||||| ||||||||| |||| | ||||||| | | ||| ||| |||||
Sbjct 501 TTGTAACTTCATGGTATACCCATGGATTGGCCAGTTCCTATTTGGAAGGCTGC-AATTTC 559
Query 163798 CTCACAGCGGCTGTGTCAACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTT-CT-CT 163855
| || || || || || || |||||| | | | | |||||| || || || || |
Sbjct 560 TTAACTGCTGCGGTTTCTACTCCTGCTAATAGTTTAGCACATTCT-TTATTATTACTAGT 618
Query 163856 GGGGTCCTGAGGCTCAGGG 163874
|||||||||| || || ||
Sbjct 619 GGGGTCCTGAAGCACAAGG 637
>seq7755
Length=16682
Score = 113 bits (124), Expect = 5e-20
Identities = 160/226 (71%), Gaps = 8/226 (4%)
Strand=Plus/Plus
Query 164194 GGCGGAGCATTGCTATCTGCTATTCACGGAGTCACAGTTGAAAATACATTGTATGAAGAT 164253
|||| ||| |||| || |||||||| || | || || ||||||| || | |||||||
Sbjct 3561 GGCGCAGCTTTGCCATGCGCTATTCAGGGTGCTACCGTATAAAATACTTTATTTGAAGAT 3620
Query 164254 GGAGAACAAGCAAACACCTTTAAGGCGTTTGATTCGACACAGGAAGAAGAGACTTATTCT 164313
|| || ||||| || || || ||| | | || || | ||||| ||||||||
Sbjct 3621 GGTGATGGCGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCA 3680
Query 164314 ATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTGTTGCGTTTTCTAACAAGCGG 164373
||||||||||| || ||||| ||||| ||| ||||| ||||| || || ||
Sbjct 3681 ATGGTCACTGCTAATCGCTTTTGGTC--------CCGGGGTTGCTTTTTCCAATAAACGT 3732
Query 164374 TGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGA 164419
||| | ||||| || ||||| ||||| || || | ||| ||||||
Sbjct 3733 TGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGA 3778
>seq6618
Length=24737
Score = 95.1 bits (104), Expect = 1e-14
Identities = 87/110 (79%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 164149 TGGACTTTGAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGCGGAGCATTGCTA 164208
||||| |||||||| || ||||||||||||||||||||| || | |||| || ||||||
Sbjct 24100 TGGACATTGAACCCATTTCATATGATGGGAGTTGCTGGTGTATTGGGCGCTGCTTTGCTA 24041
Query 164209 TCTGCTATTCACGGAGTCACAGTTGAAAATACATTGTATGAAGATGGAGA 164258
| ||||||| || | || | |||||||| || | ||||||||| ||
Sbjct 24040 TGCACTATTCATGGTGCTACCATAGAAAATACTTTATTTGAAGATGGTGA 23991
>seq8649
Length=8497
Score = 91.5 bits (100), Expect = 2e-13
Identities = 205/301 (68%), Gaps = 9/301 (3%)
Strand=Plus/Minus
Query 164345 TCTTCGGTGTT-GCGTTTTC-TAACAAGCGGTGGCTTCATTTT--TTCATGTTGTTTGTG 164400
|||| || ||| || ||||| ||| || || ||| | | ||| || ||||| |||||
Sbjct 8480 TCTTTGGGGTTTGCTTTTTCCTAATAAACGTTGGTTACTATTTCGTTTATGTTATTTGTA 8421
Query 164401 CCTGTTATG-GGTCTATGGACATCCTCTATTGGCATTATTGGCCTTGCTCTCAATCTTCG 164459
|| |||| ||| |||||| || |||| | | || | || | || || ||
Sbjct 8420 CCGGTTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTTTGGCCTTGAACCTACG 8361
Query 164460 TGCTTACGATTTTGTAAGTCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTCGAGACTTT 164519
||| || || || || ||| || ||| | || || ||||||||||| || ||||||||
Sbjct 8360 TGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCGGAAGATCCTGAATTTGAGACTTT 8301
Query 164520 CTATACCAAGAACATCTTATTGAACGAAGGACTCCGTGCATGGTTAGCACCAGTTGACCA 164579
||| ||||| || || |||| |||||||| | ||||| ||| | || | || ||
Sbjct 8300 CTACACCAAAAATATTCTATTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCA 8241
Query 164580 GC--CAGGAGAACGGTTTGTCTTCCCAGAAGAAGTACTGCCGAGAGGTAATGCGCTTTAA 164637
|| || || ||| || | ||||| || || || || || | || || || ||||||
Sbjct 8240 GCCTCATGAAAAC--CTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAA 8183
Query 164638 T 164638
|
Sbjct 8182 T 8182
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 557444081265000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |