Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conyza_20canadensis_20[genbank_20GCA_5F000775935.1_202014-11-13] 20,075 sequences; 326,165,195 total letters Query= NC_015288.1 Length=191195 Score E Sequences producing significant alignments: (Bits) Value seq20014 630 9e-176 seq20016 572 2e-158 seq2978 536 1e-147 seq2990 381 7e-101 seq2982 201 1e-46 seq15940 181 1e-40 seq8649 131 2e-25 seq7755 120 4e-22 seq13577 89.7 6e-13 seq18988 87.8 2e-12 seq12569 87.8 2e-12 >seq20014 Length=5322 Score = 630 bits (698), Expect = 9e-176 Identities = 725/970 (75%), Gaps = 8/970 (1%) Strand=Plus/Minus Query 181815 ACCAACAATCGTCTCTATGTCGGTTGGTTTGGTGTGCTGATGATCCCAACTCTGTTGGCG 181874 ||| | || ||||| || | || |||||||| || |||||||||| || | ||| | Sbjct 1899 ACCGAAAACCGTCTTTACATTGGATGGTTTGGCGTTTTGATGATCCCTACCTTATTGACC 1840 Query 181875 GCAACCATCTGT-TTCATCGTTGCTTTCGTAGCAGCACCTCCTGTCGATATCGACGGTAT 181933 ||||| ||||| || || | || ||| | || || ||||| || ||||| || ||||| Sbjct 1839 GCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTAT 1781 Query 181934 CCGCGAACCCGTAGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCTGTTGT 181993 || ||||| || |||| || || | ||||| ||||| || || || ||||| || | Sbjct 1780 TCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCGGGTGCCATTAT 1721 Query 181994 CCCATCCTCCAACGCAATTGGTCTTCACTTCTACCCAATCTGGGAAGCTGCCTCACTTGA 182053 || | || || || ||| | || || |||||||| |||||||| || || |||| Sbjct 1720 TCCTACTTCTGCAGCTATAGGTTTGCATTTTTACCCAATATGGGAAGCAGCATCTGTTGA 1661 Query 182054 TGAGTGGCTGTATAACGGTGGTCCTTTCCAACTGGTTGTTTTCCACTTCCTGATCGGCAT 182113 ||| ||| | || || |||||||||| |||| ||||| | |||||| | | || | Sbjct 1660 TGAATGGTTATACAATGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGG--T 1603 Query 182114 CTACGCCT---ACATGGGACGTGAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCCTG 182170 || || | ||||||| ||||||||||||||| || ||| | |||||||| || || Sbjct 1602 GTA-GCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGACCTTG 1544 Query 182171 GATCTGTGTAGCATACTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCTTAGTCTATCC 182230 ||| ||| ||||| || ||||| || || || || ||||||| ||||| |||| || Sbjct 1543 GATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTTGATCTACCC 1484 Query 182231 TTTCGGTCAAGGTTCGTTCTCCGATGCAATGCCCCTCGGAATCTCAGGAACATTCAACTA 182290 | |||||||| || || |||| ||||| || ||||| || || || ||||||| Sbjct 1483 AATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTT 1424 Query 182291 TATGTTGGTTTTCCAAGCTGAGCACAACATTCTTATGCATCCCTTCCACATGTTGGGTGT 182350 ||| | || ||||| |||||||||||||| |||||||| || || |||||| | || || Sbjct 1423 CATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGCTAGGCGT 1364 Query 182351 AGCAGGTGTATTCGGTGGTTCACTGTTTAGTGCAATGCACGGTTCTTTGGTTACATCTTC 182410 ||| ||||||||||| || || || |||||||| ||||| ||||||||||| || ||| Sbjct 1363 AGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGTTCTTTGGTAACCTCTAG 1304 Query 182411 ACTCGTCCGTGAGACGACTGAGCAAGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGA 182470 | || | || || || || | || || ||| | ||||||| ||||||||||| Sbjct 1303 TTTGATCAGGGAAACCACAGAAAATGAATCTGCTAACGAAGGTTACAGATTCGGTCAAGA 1244 Query 182471 AGAAGAGACCTATAACATCGTTGCAGCCCATGGCTACTTCGGTCGTTTGATCTTCCAATA 182530 |||||| || ||||| ||||| || || || || || || || || |||||||||||||| Sbjct 1243 AGAAGAAACTTATAATATCGTAGCCGCTCACGGTTATTTTGGCCGATTGATCTTCCAATA 1184 Query 182531 CGCATCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTTGG 182590 || ||||||||||| ||||| || || |||||||| ||||| |||||||| || || Sbjct 1183 TGCTAGTTTCAACAACTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGG 1124 Query 182591 AATCTGGTTCACCGCACTTGGTGTCTCCACGATGGCATTCAACCTCAACGGTTTCAACTT 182650 ||||||||||| || | ||| || ||| ||||| |||||||| || |||||||| || Sbjct 1123 TATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCTTTCAACCTAAATGGTTTCAATTT 1064 Query 182651 CAACCAGTCCATCCTTGATGGTCAGGGTCGTGTCCTTAACACTTGGGCAGATGTATTGAA 182710 |||||| || | ||||| |||| || ||||| ||||||||||||| ||| | | || Sbjct 1063 CAACCAATCAGTAGTTGATAGTCAAGGCCGTGTAATTAACACTTGGGCTGATATCATTAA 1004 Query 182711 CCGTGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTAGA 182770 ||||||| ||||||||||||||||||||||| ||||| || ||||| ||||| ||||| Sbjct 1003 CCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAATTTCCCTCTAGA 944 Query 182771 TCTTGCTGCT 182780 | |||||| Sbjct 943 CTTAGCTGCT 934 >seq20016 Length=17894 Score = 572 bits (634), Expect = 2e-158 Identities = 746/1024 (73%), Gaps = 7/1024 (1%) Strand=Plus/Plus Query 183180 GTTCGATGTCCTTGATGACTGGGTTAAACGCGATCGCTTTGTCTTTGTGGGCTGGTCTGG 183239 ||| ||| | | ||||||||| | | || || || || ||||| |||||||| || Sbjct 13766 GTTTGATATTATGGATGACTGGTTACGTAGGGACCGTTTCGTTTTTGTAGGCTGGTCCGG 13825 Query 183240 ACTCCTACTTCTTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGCACAGCTTT 183299 | | || |||| ||| ||| | || | || |||||| | || || ||| | || Sbjct 13826 CTTATTGCTCTTTCCTTGTGCCTATTTCGCTGTAGGGGGTTGGTTCACGGGTACAACCTT 13885 Query 183300 TGTTACGAGTTGGTATACCCATGGACTTGCTTCTTCCTATCTTGAAGG-TGCTAACTTTC 183358 ||| || ||||||||||||||| | || ||||||| | ||||| ||| | |||| Sbjct 13886 TGTAACTTCATGGTATACCCATGGATTGGCCAGTTCCTATTTGGAAGGCTGC--AATTTC 13943 Query 183359 TT-ACGGCAGCTGTCTCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTGTTACTTTGG 183417 || || || || || || || |||||| | | | | |||||| | | ||||| ||| Sbjct 13944 TTAACTGCTGCGGTTTCTACTCCTGCTAATAGTTTAGCACATTCTTTATTATTACTATGG 14003 Query 183418 GGTCCTGAGTCTCAAGGGGACTTTCAACGCTGGTGCCAACTTGGGGGACTCTGGAATTTT 183477 |||||||| | ||||| || ||| || ||||| ||| | || || || |||| |||| Sbjct 14004 GGTCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTTT 14063 Query 183478 GTGGCACTCCACGGTGCCTTTGCTCTCATTGGTTTCATGCTTCGACAGTTTGAACTTGCT 183537 || || ||||||||||| || | || || ||||||||| | || || || ||||||||| Sbjct 14064 GTTGCTCTCCACGGTGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTCGAACTTGCT 14123 Query 183538 CGCTTGATTGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTT 183597 || | || | || ||||| ||||| || || ||||||||||| ||||| |||||| Sbjct 14124 CGATCTGTTCAATTGCGCCCTTATAATGCAATCGCATTCTCTGGTCCAATTGCCGTTTTT 14183 Query 183598 GTCAGTGTATTCCTTATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGCACCTAGTTTC 183657 || ||||||||| || |||||||| ||||||||| ||||||||||| |||||||| Sbjct 14184 GTTTCTGTATTCCTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTT 14243 Query 183658 GGGGTAGCAGCAATCTTTAGATTCCTATTGTTCCTTCAGGGTTTCCACAACTGGACGTTA 183717 || |||||||| || ||| |||| | | || |||| || || || |||||||| || Sbjct 14244 GGTGTAGCAGCTATATTTCGATTTATCCTCTTTTTTCAAGGATTTCATAACTGGACATTG 14303 Query 183718 AACCCC-TTCCATATGATGGGAGTTGCTGGTATACTAGGAGGAGCACTACTCAGTGCTAT 183776 |||||| || ||||||||||||||||||||| || | || | || | || | ||||| Sbjct 14304 AACCCCATTTCATATGATGGGAGTTGCTGGTGTATTGGGCGCTGCTTTGCTATGCGCTAT 14363 Query 183777 CCATGGTGTCACAGTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATTCAA 183836 ||||||| || ||||| ||||| || | ||||||||| || ||||| |||||| Sbjct 14364 TCATGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGCGCAAATACATTCCG 14423 Query 183837 GGCATTTGATTCCACTCAAGAAGAAGAGACGTATTCTATGGTTACAGCGAATCGTTTCTG 183896 || ||| | | ||||||| ||||| || ||||| ||||| || || ||||| || || Sbjct 14424 TGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTTTG 14483 Query 183897 GTCACAAATCTTCGGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTT 183956 ||| |||||||| |||||||| ||| |||||| |||||||| || ||||||||||| || Sbjct 14484 GTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATT 14543 Query 183957 TGTTCCTGTCATGGGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTTGCTCTT-AATC 184015 ||| || || | ||| | ||| | | || |||| | | | || ||| ||| || | Sbjct 14544 TGTACCGGTAACTGGTTTATGGATGAGTGCTCTTGG-AGTAGTCGGTTTGGCCTTGAACC 14602 Query 184016 TTCGTGCTTATGATTTTGTAAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGA 184075 | ||||| ||||| || || ||| || || | || || |||||||| |||||||||| Sbjct 14603 TACGTGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCGGAAGATCCTGAATTTGAGA 14662 Query 184076 CGTTCTACACAAAGAACATACTTCTTAATGAAGGACTACGTGCATGGTTAGCACCTTCTG 184135 | |||||||| || || || || | || ||||| | ||||| ||| | || || | Sbjct 14663 CTTTCTACACCAAAAATATTCTATTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAG 14722 Query 184136 ATCAACCACATGAGAATTTTATATTTCCAGAGGAGGTATTACCTAGAGGCAATGCTCTTT 184195 |||| || ||||| || ||||||| || |||||||| |||| | || || ||||||| Sbjct 14723 ATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTT 14782 Query 184196 GATG 184199 ||| Sbjct 14783 AATG 14786 >seq2978 Length=1535 Score = 536 bits (594), Expect = 1e-147 Identities = 659/886 (74%), Gaps = 22/886 (2%) Strand=Plus/Plus Query 181911 CCTCCTGTCGATATCGAC-GGTATC-CGCGAACCCGTAG-----CTGGTTCACTCA--TG 181961 ||||| || ||||| || ||||| || ||||| ||| |||| || || | | Sbjct 36 CCTCCAGTAGATATTGATAGGTATTACGTGAACC--TAGTTTTACTGGATCTCTTACTTT 93 Query 181962 TATGGTAACAACATCATCTCTGGTGCTGTTGTCCCATCCTCCAACGCAATTGGTCTTCAC 182021 ||||| ||||| || || || ||||| || | || | || || || ||| | || Sbjct 94 TATGG-AACAATATTATTTCGGGTGCCATTATTCCTACTTCTGCAGCTATAGGTTTGCAT 152 Query 182022 TTCTACCCAATCTGGGAAG-CTGCCTCACTTGA-TGAGTGGCTGTATAAC-GGTGGTCCT 182078 || |||||||| ||||||| | || || |||| ||| ||| | || || ||||||||| Sbjct 153 TTTTACCCAATATGGGAAGGCAGCATCTGTTGAATGAATGGTTATACAATAGGTGGTCCT 212 Query 182079 TTCCAACTGGTTGTTTTCCACTTCCTGATCGGCATCTACGCCT---ACATGGGACGTGAG 182135 | |||| ||||| | |||||| | | || | || || | ||||||| |||||| Sbjct 213 TATGAACTAATTGTTCTACACTTCTTACTTGG--TGTA-GCTTGTTACATGGGTCGTGAG 269 Query 182136 TGGGAACTTTCTTACCGCTTAGGTATGCGTCCCTGGATCTGTGTAGCATACTCTGCTCCA 182195 ||||||||| || ||| | |||||||| || ||||| ||| ||||| || ||||| Sbjct 270 TGGGAACTTAGTTTCCGTCTGGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCT 329 Query 182196 GTCGCTGCAGCATCTGCTGTATTCTTAGTCTATCCTTTCGGTCAAGGTTCGTTCTCCGAT 182255 || || || || ||||||| ||||| |||| || | |||||||| || || ||| Sbjct 330 GTTGCAGCTGCGACTGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGAT 389 Query 182256 GCAATGCCCCTCGGAATCTCAGGAACATTCAACTATATGTTGGTTTTCCAAGCTGAGCAC 182315 | ||||| || ||||| || || || ||||||| ||| | || ||||| ||||||||| Sbjct 390 GGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCAC 449 Query 182316 AACATTCTTATGCATCCCTTCCACATGTTGGGTGTAGCAGGTGTATTCGGTGGTTCACTG 182375 ||||| |||||||| || || |||||| | || ||||| ||||||||||| || || || Sbjct 450 AACATCCTTATGCACCCATTTCACATGCTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTA 509 Query 182376 TTTAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTCCGTGAGACGACTGAGCAA 182435 |||||||| ||||| ||||||||||| || ||| | || | || || || || | Sbjct 510 TTTAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAAT 569 Query 182436 GAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTATAACATCGTTGCA 182495 || || ||| | ||||||| ||||||||||||||||| || ||||| ||||| || Sbjct 570 GAATCTGCTAACGAAGGTTACAGATTCGGTCAAGAAGAAGAAACTTATAATATCGTAGCC 629 Query 182496 GCCCATGGCTACTTCGGTCGTTTGATCTTCCAATACGCATCATTCAACAACTCCCGTTCC 182555 || || || || || || || |||||||||||||| || ||||||||||| ||||| Sbjct 630 GCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCT 689 Query 182556 TTGCACTTCTTCCTTGCTGCATGGCCTGTTGTTGGAATCTGGTTCACCGCACTTGGTGTC 182615 || || |||||||| ||||| |||||||| || || ||||||||||| || | ||| || Sbjct 690 TTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATC 749 Query 182616 TCCACGATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAG 182675 ||| ||||| |||||||| || |||||||| |||||||| || | ||||| |||| Sbjct 750 AGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAA 809 Query 182676 GGTCGTGTCCTTAACACTTGGGCAGATGTATTGAACCGTGCTGGTCTTGGTATGGAAGTT 182735 || ||||| ||||||||||||| ||| | | ||||||||| ||||||||||||||| Sbjct 810 GGCCGTGTAATTAACACTTGGGCTGATATCATTAACCGTGCTAACCTTGGTATGGAAGTT 869 Query 182736 ATGC-ATGAGCGTAACGCACACAACTTCCCACTAGATCTTGCTGCT 182780 |||| |||| ||||| || ||||| ||||| ||||| | |||||| Sbjct 870 ATGCAATGAACGTAATGCTCACAATTTCCCTCTAGACTTAGCTGCT 915 >seq2990 Length=15620 Score = 381 bits (422), Expect = 7e-101 Identities = 559/774 (72%), Gaps = 20/774 (3%) Strand=Plus/Plus Query 181815 ACCAACAATCGTCTCTATGTCGGTTGGTTTGGTGTGCTGATGATCCCAACTCTGTTGGCG 181874 ||| | || ||||| || | || |||||||| || |||||||||| || | ||| | Sbjct 14851 ACCGAAAACCGTCTTTACATTGGATGGTTTGGCGTTTTGATGATCCCTACCTTATTGACC 14910 Query 181875 GCAACCATCTGT-TTCATCGTTGCTTTCGTAGCAGCACCTCCTGTCGATATCGACGGTAT 181933 ||||| ||||| || || | || ||| | || || ||||| || ||||| || ||||| Sbjct 14911 GCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTAT 14969 Query 181934 CCGCGAACCCGTAGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCTGTTGT 181993 || ||||| || |||| || || | ||||| ||||| || || || ||||| || | Sbjct 14970 TCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCGGGTGCCATTAT 15029 Query 181994 CCCATCCTCCAACGCAATTGGTCTTCACTTCTACCCAATCTGGGAAGCTGCCTCACTTGA 182053 || | || || || ||| | || || |||||||| |||||||| || || |||| Sbjct 15030 TCCTACTTCTGCAGCTATAGGTTTGCATTTTTACCCAATATGGGAAGCAGCATCTGTTGA 15089 Query 182054 TGAGTGGCTGTATAACGGTGGTCCTTTCCAACTGGTTGTTTTCCACTTCCTGATCGGCAT 182113 ||| ||| | || || |||||||||| |||| ||||| | |||||| | | || | Sbjct 15090 TGAATGGTTATACAATGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGG--T 15147 Query 182114 CTACGCCT---ACATGGGACGTGAGTGGG-AACTTTCTTACCGCTTAGGTATGCGTCCCT 182169 || || | ||||||| |||||||||| ||||| || ||| | |||||||| || | Sbjct 15148 GTA-GCTTGTTACATGGGTCGTGAGTGGGGAACTTAGTTTCCGTCTGGGTATGCGACCTT 15206 Query 182170 GGATCTGTGTAGCATACTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCTTAGTCTATC 182229 |||| ||| ||||| || ||||| || || || || ||||||| ||||| |||| | Sbjct 15207 GGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTTGATCTACC 15266 Query 182230 CTTTCGGTCAAGGTTCGTTCTCCGATGCAATGCCCCTCGGAATCTCAGGAACATTCAACT 182289 | | |||||||| || || |||| ||||| || ||||| || || || ||||||| Sbjct 15267 CAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACT 15326 Query 182290 ATATGTTGGTTTTCCAAGCTGAGCACAACATTCTTATGCATCCCTTCCACATGTTGGGTG 182349 ||| | || ||||| |||||||||||||| |||||||| || || |||||| | || | Sbjct 15327 TCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGCTAGGCG 15386 Query 182350 TAGCAGGTGTATTCGGTGGTTCACTGTTTAGTGCAATGCACGGTTCTTTGGTTACATCTT 182409 |||| ||||||||||| || || || |||||||| ||||| ||||||||||| || ||| Sbjct 15387 TAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGTTCTTTGGTAACCTCTA 15446 Query 182410 CACTCGTCCGTGAGACGACTGAGCAAGAGTCACAGAACTATGGTTACAAGTTCGGTCAAG 182469 | || | || || || || | || || ||| | ||||||| |||||||||| Sbjct 15447 GTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAACGAAGGTTACAGATTCGGTCAAG 15506 Query 182470 AAGAAGAGACCTATAACATCGTTGCAGC-CCATGG-CTACTTCGGTCGT-TTGA-TCTT- 182524 ||||||| || ||||| ||||| || || | | || || || || ||| |||| |||| Sbjct 15507 AAGAAGAAACTTATAATATCGTAGCCGCTCTACGGTTTATTTTGGCCGTATTGATTCTTA 15566 Query 182525 -CCAATACGCATCA---TTCAACAACTC-CCGTTCCTTGC-ACTTCTTCCTTGC 182572 | |||| | | | | ||||||||| ||||| || | | |||||||| || Sbjct 15567 CCTAATATGTCTTAGTTTACAACAACTCTTCGTTCTTTACTATTTCTTCCTAGC 15620 >seq2982 Length=1363 Score = 201 bits (222), Expect = 1e-46 Identities = 286/395 (72%), Gaps = 7/395 (2%) Strand=Plus/Minus Query 183809 AAGATGGAGAACAAGCAAACACATTCAAGGCATTTGATTCCACTCAAGAA-GAAGAGACG 183867 ||||||| || ||||| |||||| || ||| | | |||||||| ||||| || Sbjct 1357 AAGATGGTGATGGCGCAAATACATTCCGTGCTTTTAACCCAACTCAAGACTGAAGAAACT 1298 Query 183868 TATTCTA-TGGT-TACAGCGAATCGTTTCTGGTCACAAATCTTCGGGGTTGCGTTTAGCA 183925 ||||||| |||| ||| || |||||| | ||||| |||||| |||||||| ||| | Sbjct 1297 TATTCTAATGGTCTACCGCTAATCGTCTTTGGTCC--AATCTTTGGGGTTGCTTTTCCTA 1240 Query 183926 ATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTCATGGGTCTTTGGGTCTCTT 183985 |||| |||||||| || ||||||||||| ||||| || || | ||| | ||| | | Sbjct 1239 ATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTG 1180 Query 183986 CTATTGGCATCATTGGGCTTGCTCTT-AATCTTCGTGCTTATGATTTTGTAAGTCAAGAG 184044 || |||| | | | || ||| ||| || || ||||| ||||| || || ||| || Sbjct 1179 CTCTTGGAGT-AGTCGGTTTGGCCTTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAA 1121 Query 184045 ATCAGAGCAGCAGAAGATCCAGAATTTGAGACGTTCTACACAAAGAACATACTTCTTAAT 184104 || | || || |||||||| ||||||||||| |||||||| || || || || | || Sbjct 1120 ATTCGCGCGGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTATTAAAC 1061 Query 184105 GAAGGACTACGTGCATGGTTAGCACCTTCTGATCAACCACATGAGAATTTTATATTTCCA 184164 ||||| | ||||| ||| | || || ||||| || ||||| || ||||||| || Sbjct 1060 GAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCT 1001 Query 184165 GAGGAGGTATTACCTAGAGGCAATGCTCTTTGATG 184199 |||||||| |||| | || || ||||||| ||| Sbjct 1000 GAGGAGGTTCTACCCCGTGGAAACGCTCTTTAATG 966 >seq15940 Length=20296 Score = 181 bits (200), Expect = 1e-40 Identities = 245/336 (73%), Gaps = 4/336 (1%) Strand=Plus/Plus Query 183868 TATTCTATGGTTACAGCGAATCGTTTCTGGTCACAAATCTTCGGGGTTGCGTTTAGCAAT 183927 ||||| ||||| || || ||||| || ||||| |||||||| |||||||| ||| |||| Sbjct 19769 TATTCAATGGTCACCGCTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAAT 19828 Query 183928 AAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTCATGGGTCTTTGGGTCTCTTCT 183987 || |||||||| || ||||||||||| ||||| || || | ||| | ||| | | || Sbjct 19829 AAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGCT 19888 Query 183988 ATTGGCATCATTGGGCTTGCTCTT-AATCTTCGTGCTTATGATTTTGTAAGTCAAGAGAT 184046 || | | | | || ||| ||| || || ||||| ||||| || || ||| || || Sbjct 19889 CTTTGGAGTAGTCGGTTTGGCCTTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAAAT 19948 Query 184047 CAGAGCAGCAGAAGATCCAGAA-TTTGAGACGTTCTACA-CAAAGAACATACTTCTTAAT 184104 | || || |||||||| ||| |||||||| ||||||| |||| || || || | || Sbjct 19949 TCGCGCGGCGGAAGATCCTGAATTTTGAGACTTTCTACACCAAAAAATATTCTATTAAAC 20008 Query 184105 GAAGGACTACGTGCATGGTTAGCACCTTCTGATCAACCACATG-AGAATTTTATATTTCC 184163 ||||| | ||||| ||| | || || ||||| || |||| | || ||||||| || Sbjct 20009 GAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAAACCTTATATTCCC 20068 Query 184164 AGAGGAGGTATTACCTAGAGGCAATGCTCTTTGATG 184199 |||||||| |||| | || || ||||||| ||| Sbjct 20069 TGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAATG 20104 >seq8649 Length=8497 Score = 131 bits (144), Expect = 2e-25 Identities = 217/304 (71%), Gaps = 7/304 (2%) Strand=Plus/Minus Query 183902 AAATCTTCGGGGTT-GCGTTTAGC-AATAAGCGTTGGTTGC-ACTTC-TTTATGTTGTTT 183957 || |||| |||||| || ||| | ||||| |||||||| | | ||| |||||||| ||| Sbjct 8483 AAGTCTTTGGGGTTTGCTTTTTCCTAATAAACGTTGGTTACTATTTCGTTTATGTTATTT 8424 Query 183958 GTTCCTGTCATG-GGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTTGCTCTT-AATC 184015 || || || | ||| | ||| | | || |||| | | | || ||| ||| || | Sbjct 8423 GTACCGGTTAACTGGTTTATGGATGAGTGCTCTTGGAGT-AGTCGGTTTGGCCTTGAACC 8365 Query 184016 TTCGTGCTTATGATTTTGTAAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGA 184075 | ||||| ||||| || || ||| || || | || || |||||||| |||||||||| Sbjct 8364 TACGTGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCGGAAGATCCTGAATTTGAGA 8305 Query 184076 CGTTCTACACAAAGAACATACTTCTTAATGAAGGACTACGTGCATGGTTAGCACCTTCTG 184135 | |||||||| || || || || | || ||||| | ||||| ||| | || || | Sbjct 8304 CTTTCTACACCAAAAATATTCTATTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAG 8245 Query 184136 ATCAACCACATGAGAATTTTATATTTCCAGAGGAGGTATTACCTAGAGGCAATGCTCTTT 184195 |||| || ||||| || ||||||| || |||||||| |||| | || || ||||||| Sbjct 8244 ATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTT 8185 Query 184196 GATG 184199 ||| Sbjct 8184 AATG 8181 >seq7755 Length=16682 Score = 120 bits (132), Expect = 4e-22 Identities = 150/207 (72%), Gaps = 8/207 (4%) Strand=Plus/Plus Query 183772 GCTATCCATGGTGTCACAGTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACA 183831 ||||| || |||| || ||| | ||||| || | ||||||||| || ||||| ||| Sbjct 3579 GCTATTCAGGGTGCTACCGTATAAAATACTTTATTTGAAGATGGTGATGGCGCAAATACA 3638 Query 183832 TTCAAGGCATTTGATTCCACTCAAGAAGAAGAGACGTATTCTATGGTTACAGCGAATCGT 183891 ||| || ||| | | ||||||| ||||| || ||||| ||||| || || ||||| Sbjct 3639 TTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAATCGC 3698 Query 183892 TTCTGGTCACAAATCTTCGGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATG 183951 || ||||| | |||||||| ||| |||||| |||||||| || ||||||||| Sbjct 3699 TTTTGGTCCC--------GGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATG 3750 Query 183952 TTGTTTGTTCCTGTCATGGGTCTTTGG 183978 || ||||| || || | ||| | ||| Sbjct 3751 TTATTTGTACCGGTAACTGGTTTATGG 3777 >seq13577 Length=50240 Score = 89.7 bits (98), Expect = 6e-13 Identities = 231/357 (65%), Gaps = 35/357 (10%) Strand=Plus/Minus Query 183772 GCTATCCATGGTGTCACAGTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACA 183831 ||||| ||||||| || ||||| ||||| || | ||||||||| || | || ||| Sbjct 19490 GCTATTCATGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGACGCTTACA-- 19433 Query 183832 TTCAAGGCATTTGATTCCACTCAAGAAGAAGAGACGTATTCTATGGTTACAGCGAATCGT 183891 ||| | | ||| | || ||||||| ||||| || ||||| ||||| || || | Sbjct 19432 TTCCATGTTTTTAACTCAACTCAAGCTGAAGAAACTTATTCAATGGTGACTGC------T 19379 Query 183892 TTCTGGTCACAAATCTTCGGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATG 183951 || ||| |||||| |||||||| || |||||||| Sbjct 19378 TT-------------TTC--------------CAATAAACGTTGGTTACATTTCTTTATC 19346 Query 183952 TTGTTTGTTCCTGTCATGGGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTTGCTCTT 184011 || ||||| || || | ||| | ||| | | || |||| | | | | || || Sbjct 19345 TTATTTGTACCGGTAACTGGTTTATGGATGAATGCTCTTGGAGTAGTCAGTTTGGCCTTT 19286 Query 184012 AATCTTCGTGCTTATGATTTTGTAAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTT 184071 || || ||||| ||||| || || ||| || || | | || ||||||| |||||| Sbjct 19285 AACCTACGTGCCTATGACTTCGTTTCTCAGGAAATTCGCGTGGCGAAAGATCCTGAATTT 19226 Query 184072 GAGACGTTCTACACAAAGAACATACTTCTTAATGAAGGACTACGTGCATGGTTAGCA 184128 ||||| || ||||| || || || || | || |||||| | |||| ||| | ||| Sbjct 19225 GAGACTTTATACACCAAAAATATTCTATTAAACGAAGGAATTGGTGCTTGGATGGCA 19169 >seq18988 Length=14164 Score = 87.8 bits (96), Expect = 2e-12 Identities = 72/88 (82%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 182693 TTGGGCAGATGTATTGAACCGTGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGC 182752 |||||| ||| | | ||||||||| ||||||||||||||||||||||| ||||| || Sbjct 7908 TTGGGCTGATATCATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGC 7967 Query 182753 ACACAACTTCCCACTAGATCTTGCTGCT 182780 ||||| ||||| ||||| | |||||| Sbjct 7968 TCACAATTTCCCTCTAGACTTAGCTGCT 7995 >seq12569 Length=659 Score = 87.8 bits (96), Expect = 2e-12 Identities = 177/258 (69%), Gaps = 5/258 (2%) Strand=Plus/Plus Query 183180 GTTCGATGTCCTTGATGACTGGGTTAAACGCGATCGCTTTGTCTTTGTGGGCTGGTCTGG 183239 ||| ||| | | ||||||||| | | || || || || ||||| |||||||| || Sbjct 382 GTTTGATATTATGGATGACTGGTTACGTAGGGACCGTTTCGTTTTTGTAGGCTGGTCCGG 441 Query 183240 ACTCCTACTTCTTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGCACAGCTTT 183299 | | || |||| ||| ||| | || | || |||||| | || || ||| | || Sbjct 442 CTTATTGCTCTTTCCTTGTGCCTATTTCGCTGTAGGGGGTTGGTTCACGGGTACAACCTT 501 Query 183300 TGTTACGAGTTGGTATACCCATGGACTTGCTTCTTCCTATCTTGAAGG-TGCTAACTTTC 183358 ||| || ||||||||||||||| | || ||||||| | ||||| ||| | |||| Sbjct 502 TGTAACTTCATGGTATACCCATGGATTGGCCAGTTCCTATTTGGAAGGCTGC--AATTTC 559 Query 183359 TT-ACGGCAGCTGTCTCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTGTTACT-TTG 183416 || || || || || || || |||||| | | | | |||||| | | ||||| || Sbjct 560 TTAACTGCTGCGGTTTCTACTCCTGCTAATAGTTTAGCACATTCTTTATTATTACTAGTG 619 Query 183417 GGGTCCTGAGTCTCAAGG 183434 ||||||||| | ||||| Sbjct 620 GGGTCCTGAAGCACAAGG 637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611542502535000