Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Conyza_20canadensis_20[genbank_20GCA_5F000775935.1_202014-11-13]
20,075 sequences; 326,165,195 total letters
Query= NC_015288.1
Length=191195
Score E
Sequences producing significant alignments: (Bits) Value
seq20014 630 9e-176
seq20016 572 2e-158
seq2978 536 1e-147
seq2990 381 7e-101
seq2982 201 1e-46
seq15940 181 1e-40
seq8649 131 2e-25
seq7755 120 4e-22
seq13577 89.7 6e-13
seq18988 87.8 2e-12
seq12569 87.8 2e-12
>seq20014
Length=5322
Score = 630 bits (698), Expect = 9e-176
Identities = 725/970 (75%), Gaps = 8/970 (1%)
Strand=Plus/Minus
Query 181815 ACCAACAATCGTCTCTATGTCGGTTGGTTTGGTGTGCTGATGATCCCAACTCTGTTGGCG 181874
||| | || ||||| || | || |||||||| || |||||||||| || | ||| |
Sbjct 1899 ACCGAAAACCGTCTTTACATTGGATGGTTTGGCGTTTTGATGATCCCTACCTTATTGACC 1840
Query 181875 GCAACCATCTGT-TTCATCGTTGCTTTCGTAGCAGCACCTCCTGTCGATATCGACGGTAT 181933
||||| ||||| || || | || ||| | || || ||||| || ||||| || |||||
Sbjct 1839 GCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTAT 1781
Query 181934 CCGCGAACCCGTAGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCTGTTGT 181993
|| ||||| || |||| || || | ||||| ||||| || || || ||||| || |
Sbjct 1780 TCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCGGGTGCCATTAT 1721
Query 181994 CCCATCCTCCAACGCAATTGGTCTTCACTTCTACCCAATCTGGGAAGCTGCCTCACTTGA 182053
|| | || || || ||| | || || |||||||| |||||||| || || ||||
Sbjct 1720 TCCTACTTCTGCAGCTATAGGTTTGCATTTTTACCCAATATGGGAAGCAGCATCTGTTGA 1661
Query 182054 TGAGTGGCTGTATAACGGTGGTCCTTTCCAACTGGTTGTTTTCCACTTCCTGATCGGCAT 182113
||| ||| | || || |||||||||| |||| ||||| | |||||| | | || |
Sbjct 1660 TGAATGGTTATACAATGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGG--T 1603
Query 182114 CTACGCCT---ACATGGGACGTGAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCCTG 182170
|| || | ||||||| ||||||||||||||| || ||| | |||||||| || ||
Sbjct 1602 GTA-GCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGACCTTG 1544
Query 182171 GATCTGTGTAGCATACTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCTTAGTCTATCC 182230
||| ||| ||||| || ||||| || || || || ||||||| ||||| |||| ||
Sbjct 1543 GATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTTGATCTACCC 1484
Query 182231 TTTCGGTCAAGGTTCGTTCTCCGATGCAATGCCCCTCGGAATCTCAGGAACATTCAACTA 182290
| |||||||| || || |||| ||||| || ||||| || || || |||||||
Sbjct 1483 AATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTT 1424
Query 182291 TATGTTGGTTTTCCAAGCTGAGCACAACATTCTTATGCATCCCTTCCACATGTTGGGTGT 182350
||| | || ||||| |||||||||||||| |||||||| || || |||||| | || ||
Sbjct 1423 CATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGCTAGGCGT 1364
Query 182351 AGCAGGTGTATTCGGTGGTTCACTGTTTAGTGCAATGCACGGTTCTTTGGTTACATCTTC 182410
||| ||||||||||| || || || |||||||| ||||| ||||||||||| || |||
Sbjct 1363 AGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGTTCTTTGGTAACCTCTAG 1304
Query 182411 ACTCGTCCGTGAGACGACTGAGCAAGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGA 182470
| || | || || || || | || || ||| | ||||||| |||||||||||
Sbjct 1303 TTTGATCAGGGAAACCACAGAAAATGAATCTGCTAACGAAGGTTACAGATTCGGTCAAGA 1244
Query 182471 AGAAGAGACCTATAACATCGTTGCAGCCCATGGCTACTTCGGTCGTTTGATCTTCCAATA 182530
|||||| || ||||| ||||| || || || || || || || || ||||||||||||||
Sbjct 1243 AGAAGAAACTTATAATATCGTAGCCGCTCACGGTTATTTTGGCCGATTGATCTTCCAATA 1184
Query 182531 CGCATCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTTGG 182590
|| ||||||||||| ||||| || || |||||||| ||||| |||||||| || ||
Sbjct 1183 TGCTAGTTTCAACAACTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGG 1124
Query 182591 AATCTGGTTCACCGCACTTGGTGTCTCCACGATGGCATTCAACCTCAACGGTTTCAACTT 182650
||||||||||| || | ||| || ||| ||||| |||||||| || |||||||| ||
Sbjct 1123 TATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCTTTCAACCTAAATGGTTTCAATTT 1064
Query 182651 CAACCAGTCCATCCTTGATGGTCAGGGTCGTGTCCTTAACACTTGGGCAGATGTATTGAA 182710
|||||| || | ||||| |||| || ||||| ||||||||||||| ||| | | ||
Sbjct 1063 CAACCAATCAGTAGTTGATAGTCAAGGCCGTGTAATTAACACTTGGGCTGATATCATTAA 1004
Query 182711 CCGTGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTAGA 182770
||||||| ||||||||||||||||||||||| ||||| || ||||| ||||| |||||
Sbjct 1003 CCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAATTTCCCTCTAGA 944
Query 182771 TCTTGCTGCT 182780
| ||||||
Sbjct 943 CTTAGCTGCT 934
>seq20016
Length=17894
Score = 572 bits (634), Expect = 2e-158
Identities = 746/1024 (73%), Gaps = 7/1024 (1%)
Strand=Plus/Plus
Query 183180 GTTCGATGTCCTTGATGACTGGGTTAAACGCGATCGCTTTGTCTTTGTGGGCTGGTCTGG 183239
||| ||| | | ||||||||| | | || || || || ||||| |||||||| ||
Sbjct 13766 GTTTGATATTATGGATGACTGGTTACGTAGGGACCGTTTCGTTTTTGTAGGCTGGTCCGG 13825
Query 183240 ACTCCTACTTCTTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGCACAGCTTT 183299
| | || |||| ||| ||| | || | || |||||| | || || ||| | ||
Sbjct 13826 CTTATTGCTCTTTCCTTGTGCCTATTTCGCTGTAGGGGGTTGGTTCACGGGTACAACCTT 13885
Query 183300 TGTTACGAGTTGGTATACCCATGGACTTGCTTCTTCCTATCTTGAAGG-TGCTAACTTTC 183358
||| || ||||||||||||||| | || ||||||| | ||||| ||| | ||||
Sbjct 13886 TGTAACTTCATGGTATACCCATGGATTGGCCAGTTCCTATTTGGAAGGCTGC--AATTTC 13943
Query 183359 TT-ACGGCAGCTGTCTCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTGTTACTTTGG 183417
|| || || || || || || |||||| | | | | |||||| | | ||||| |||
Sbjct 13944 TTAACTGCTGCGGTTTCTACTCCTGCTAATAGTTTAGCACATTCTTTATTATTACTATGG 14003
Query 183418 GGTCCTGAGTCTCAAGGGGACTTTCAACGCTGGTGCCAACTTGGGGGACTCTGGAATTTT 183477
|||||||| | ||||| || ||| || ||||| ||| | || || || |||| ||||
Sbjct 14004 GGTCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTTT 14063
Query 183478 GTGGCACTCCACGGTGCCTTTGCTCTCATTGGTTTCATGCTTCGACAGTTTGAACTTGCT 183537
|| || ||||||||||| || | || || ||||||||| | || || || |||||||||
Sbjct 14064 GTTGCTCTCCACGGTGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTCGAACTTGCT 14123
Query 183538 CGCTTGATTGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTT 183597
|| | || | || ||||| ||||| || || ||||||||||| ||||| ||||||
Sbjct 14124 CGATCTGTTCAATTGCGCCCTTATAATGCAATCGCATTCTCTGGTCCAATTGCCGTTTTT 14183
Query 183598 GTCAGTGTATTCCTTATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGCACCTAGTTTC 183657
|| ||||||||| || |||||||| ||||||||| ||||||||||| ||||||||
Sbjct 14184 GTTTCTGTATTCCTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTTT 14243
Query 183658 GGGGTAGCAGCAATCTTTAGATTCCTATTGTTCCTTCAGGGTTTCCACAACTGGACGTTA 183717
|| |||||||| || ||| |||| | | || |||| || || || |||||||| ||
Sbjct 14244 GGTGTAGCAGCTATATTTCGATTTATCCTCTTTTTTCAAGGATTTCATAACTGGACATTG 14303
Query 183718 AACCCC-TTCCATATGATGGGAGTTGCTGGTATACTAGGAGGAGCACTACTCAGTGCTAT 183776
|||||| || ||||||||||||||||||||| || | || | || | || | |||||
Sbjct 14304 AACCCCATTTCATATGATGGGAGTTGCTGGTGTATTGGGCGCTGCTTTGCTATGCGCTAT 14363
Query 183777 CCATGGTGTCACAGTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATTCAA 183836
||||||| || ||||| ||||| || | ||||||||| || ||||| ||||||
Sbjct 14364 TCATGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGCGCAAATACATTCCG 14423
Query 183837 GGCATTTGATTCCACTCAAGAAGAAGAGACGTATTCTATGGTTACAGCGAATCGTTTCTG 183896
|| ||| | | ||||||| ||||| || ||||| ||||| || || ||||| || ||
Sbjct 14424 TGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTTTG 14483
Query 183897 GTCACAAATCTTCGGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTT 183956
||| |||||||| |||||||| ||| |||||| |||||||| || ||||||||||| ||
Sbjct 14484 GTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATT 14543
Query 183957 TGTTCCTGTCATGGGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTTGCTCTT-AATC 184015
||| || || | ||| | ||| | | || |||| | | | || ||| ||| || |
Sbjct 14544 TGTACCGGTAACTGGTTTATGGATGAGTGCTCTTGG-AGTAGTCGGTTTGGCCTTGAACC 14602
Query 184016 TTCGTGCTTATGATTTTGTAAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGA 184075
| ||||| ||||| || || ||| || || | || || |||||||| ||||||||||
Sbjct 14603 TACGTGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCGGAAGATCCTGAATTTGAGA 14662
Query 184076 CGTTCTACACAAAGAACATACTTCTTAATGAAGGACTACGTGCATGGTTAGCACCTTCTG 184135
| |||||||| || || || || | || ||||| | ||||| ||| | || || |
Sbjct 14663 CTTTCTACACCAAAAATATTCTATTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAG 14722
Query 184136 ATCAACCACATGAGAATTTTATATTTCCAGAGGAGGTATTACCTAGAGGCAATGCTCTTT 184195
|||| || ||||| || ||||||| || |||||||| |||| | || || |||||||
Sbjct 14723 ATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTT 14782
Query 184196 GATG 184199
|||
Sbjct 14783 AATG 14786
>seq2978
Length=1535
Score = 536 bits (594), Expect = 1e-147
Identities = 659/886 (74%), Gaps = 22/886 (2%)
Strand=Plus/Plus
Query 181911 CCTCCTGTCGATATCGAC-GGTATC-CGCGAACCCGTAG-----CTGGTTCACTCA--TG 181961
||||| || ||||| || ||||| || ||||| ||| |||| || || | |
Sbjct 36 CCTCCAGTAGATATTGATAGGTATTACGTGAACC--TAGTTTTACTGGATCTCTTACTTT 93
Query 181962 TATGGTAACAACATCATCTCTGGTGCTGTTGTCCCATCCTCCAACGCAATTGGTCTTCAC 182021
||||| ||||| || || || ||||| || | || | || || || ||| | ||
Sbjct 94 TATGG-AACAATATTATTTCGGGTGCCATTATTCCTACTTCTGCAGCTATAGGTTTGCAT 152
Query 182022 TTCTACCCAATCTGGGAAG-CTGCCTCACTTGA-TGAGTGGCTGTATAAC-GGTGGTCCT 182078
|| |||||||| ||||||| | || || |||| ||| ||| | || || |||||||||
Sbjct 153 TTTTACCCAATATGGGAAGGCAGCATCTGTTGAATGAATGGTTATACAATAGGTGGTCCT 212
Query 182079 TTCCAACTGGTTGTTTTCCACTTCCTGATCGGCATCTACGCCT---ACATGGGACGTGAG 182135
| |||| ||||| | |||||| | | || | || || | ||||||| ||||||
Sbjct 213 TATGAACTAATTGTTCTACACTTCTTACTTGG--TGTA-GCTTGTTACATGGGTCGTGAG 269
Query 182136 TGGGAACTTTCTTACCGCTTAGGTATGCGTCCCTGGATCTGTGTAGCATACTCTGCTCCA 182195
||||||||| || ||| | |||||||| || ||||| ||| ||||| || |||||
Sbjct 270 TGGGAACTTAGTTTCCGTCTGGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCT 329
Query 182196 GTCGCTGCAGCATCTGCTGTATTCTTAGTCTATCCTTTCGGTCAAGGTTCGTTCTCCGAT 182255
|| || || || ||||||| ||||| |||| || | |||||||| || || |||
Sbjct 330 GTTGCAGCTGCGACTGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGAT 389
Query 182256 GCAATGCCCCTCGGAATCTCAGGAACATTCAACTATATGTTGGTTTTCCAAGCTGAGCAC 182315
| ||||| || ||||| || || || ||||||| ||| | || ||||| |||||||||
Sbjct 390 GGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCAC 449
Query 182316 AACATTCTTATGCATCCCTTCCACATGTTGGGTGTAGCAGGTGTATTCGGTGGTTCACTG 182375
||||| |||||||| || || |||||| | || ||||| ||||||||||| || || ||
Sbjct 450 AACATCCTTATGCACCCATTTCACATGCTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTA 509
Query 182376 TTTAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTCCGTGAGACGACTGAGCAA 182435
|||||||| ||||| ||||||||||| || ||| | || | || || || || |
Sbjct 510 TTTAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAAT 569
Query 182436 GAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTATAACATCGTTGCA 182495
|| || ||| | ||||||| ||||||||||||||||| || ||||| ||||| ||
Sbjct 570 GAATCTGCTAACGAAGGTTACAGATTCGGTCAAGAAGAAGAAACTTATAATATCGTAGCC 629
Query 182496 GCCCATGGCTACTTCGGTCGTTTGATCTTCCAATACGCATCATTCAACAACTCCCGTTCC 182555
|| || || || || || || |||||||||||||| || ||||||||||| |||||
Sbjct 630 GCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCT 689
Query 182556 TTGCACTTCTTCCTTGCTGCATGGCCTGTTGTTGGAATCTGGTTCACCGCACTTGGTGTC 182615
|| || |||||||| ||||| |||||||| || || ||||||||||| || | ||| ||
Sbjct 690 TTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATC 749
Query 182616 TCCACGATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAG 182675
||| ||||| |||||||| || |||||||| |||||||| || | ||||| ||||
Sbjct 750 AGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAA 809
Query 182676 GGTCGTGTCCTTAACACTTGGGCAGATGTATTGAACCGTGCTGGTCTTGGTATGGAAGTT 182735
|| ||||| ||||||||||||| ||| | | ||||||||| |||||||||||||||
Sbjct 810 GGCCGTGTAATTAACACTTGGGCTGATATCATTAACCGTGCTAACCTTGGTATGGAAGTT 869
Query 182736 ATGC-ATGAGCGTAACGCACACAACTTCCCACTAGATCTTGCTGCT 182780
|||| |||| ||||| || ||||| ||||| ||||| | ||||||
Sbjct 870 ATGCAATGAACGTAATGCTCACAATTTCCCTCTAGACTTAGCTGCT 915
>seq2990
Length=15620
Score = 381 bits (422), Expect = 7e-101
Identities = 559/774 (72%), Gaps = 20/774 (3%)
Strand=Plus/Plus
Query 181815 ACCAACAATCGTCTCTATGTCGGTTGGTTTGGTGTGCTGATGATCCCAACTCTGTTGGCG 181874
||| | || ||||| || | || |||||||| || |||||||||| || | ||| |
Sbjct 14851 ACCGAAAACCGTCTTTACATTGGATGGTTTGGCGTTTTGATGATCCCTACCTTATTGACC 14910
Query 181875 GCAACCATCTGT-TTCATCGTTGCTTTCGTAGCAGCACCTCCTGTCGATATCGACGGTAT 181933
||||| ||||| || || | || ||| | || || ||||| || ||||| || |||||
Sbjct 14911 GCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTAT 14969
Query 181934 CCGCGAACCCGTAGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCTGTTGT 181993
|| ||||| || |||| || || | ||||| ||||| || || || ||||| || |
Sbjct 14970 TCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCGGGTGCCATTAT 15029
Query 181994 CCCATCCTCCAACGCAATTGGTCTTCACTTCTACCCAATCTGGGAAGCTGCCTCACTTGA 182053
|| | || || || ||| | || || |||||||| |||||||| || || ||||
Sbjct 15030 TCCTACTTCTGCAGCTATAGGTTTGCATTTTTACCCAATATGGGAAGCAGCATCTGTTGA 15089
Query 182054 TGAGTGGCTGTATAACGGTGGTCCTTTCCAACTGGTTGTTTTCCACTTCCTGATCGGCAT 182113
||| ||| | || || |||||||||| |||| ||||| | |||||| | | || |
Sbjct 15090 TGAATGGTTATACAATGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGG--T 15147
Query 182114 CTACGCCT---ACATGGGACGTGAGTGGG-AACTTTCTTACCGCTTAGGTATGCGTCCCT 182169
|| || | ||||||| |||||||||| ||||| || ||| | |||||||| || |
Sbjct 15148 GTA-GCTTGTTACATGGGTCGTGAGTGGGGAACTTAGTTTCCGTCTGGGTATGCGACCTT 15206
Query 182170 GGATCTGTGTAGCATACTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCTTAGTCTATC 182229
|||| ||| ||||| || ||||| || || || || ||||||| ||||| |||| |
Sbjct 15207 GGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTTGATCTACC 15266
Query 182230 CTTTCGGTCAAGGTTCGTTCTCCGATGCAATGCCCCTCGGAATCTCAGGAACATTCAACT 182289
| | |||||||| || || |||| ||||| || ||||| || || || |||||||
Sbjct 15267 CAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACT 15326
Query 182290 ATATGTTGGTTTTCCAAGCTGAGCACAACATTCTTATGCATCCCTTCCACATGTTGGGTG 182349
||| | || ||||| |||||||||||||| |||||||| || || |||||| | || |
Sbjct 15327 TCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGCTAGGCG 15386
Query 182350 TAGCAGGTGTATTCGGTGGTTCACTGTTTAGTGCAATGCACGGTTCTTTGGTTACATCTT 182409
|||| ||||||||||| || || || |||||||| ||||| ||||||||||| || |||
Sbjct 15387 TAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGTTCTTTGGTAACCTCTA 15446
Query 182410 CACTCGTCCGTGAGACGACTGAGCAAGAGTCACAGAACTATGGTTACAAGTTCGGTCAAG 182469
| || | || || || || | || || ||| | ||||||| ||||||||||
Sbjct 15447 GTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAACGAAGGTTACAGATTCGGTCAAG 15506
Query 182470 AAGAAGAGACCTATAACATCGTTGCAGC-CCATGG-CTACTTCGGTCGT-TTGA-TCTT- 182524
||||||| || ||||| ||||| || || | | || || || || ||| |||| ||||
Sbjct 15507 AAGAAGAAACTTATAATATCGTAGCCGCTCTACGGTTTATTTTGGCCGTATTGATTCTTA 15566
Query 182525 -CCAATACGCATCA---TTCAACAACTC-CCGTTCCTTGC-ACTTCTTCCTTGC 182572
| |||| | | | | ||||||||| ||||| || | | |||||||| ||
Sbjct 15567 CCTAATATGTCTTAGTTTACAACAACTCTTCGTTCTTTACTATTTCTTCCTAGC 15620
>seq2982
Length=1363
Score = 201 bits (222), Expect = 1e-46
Identities = 286/395 (72%), Gaps = 7/395 (2%)
Strand=Plus/Minus
Query 183809 AAGATGGAGAACAAGCAAACACATTCAAGGCATTTGATTCCACTCAAGAA-GAAGAGACG 183867
||||||| || ||||| |||||| || ||| | | |||||||| ||||| ||
Sbjct 1357 AAGATGGTGATGGCGCAAATACATTCCGTGCTTTTAACCCAACTCAAGACTGAAGAAACT 1298
Query 183868 TATTCTA-TGGT-TACAGCGAATCGTTTCTGGTCACAAATCTTCGGGGTTGCGTTTAGCA 183925
||||||| |||| ||| || |||||| | ||||| |||||| |||||||| ||| |
Sbjct 1297 TATTCTAATGGTCTACCGCTAATCGTCTTTGGTCC--AATCTTTGGGGTTGCTTTTCCTA 1240
Query 183926 ATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTCATGGGTCTTTGGGTCTCTT 183985
|||| |||||||| || ||||||||||| ||||| || || | ||| | ||| | |
Sbjct 1239 ATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTG 1180
Query 183986 CTATTGGCATCATTGGGCTTGCTCTT-AATCTTCGTGCTTATGATTTTGTAAGTCAAGAG 184044
|| |||| | | | || ||| ||| || || ||||| ||||| || || ||| ||
Sbjct 1179 CTCTTGGAGT-AGTCGGTTTGGCCTTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAA 1121
Query 184045 ATCAGAGCAGCAGAAGATCCAGAATTTGAGACGTTCTACACAAAGAACATACTTCTTAAT 184104
|| | || || |||||||| ||||||||||| |||||||| || || || || | ||
Sbjct 1120 ATTCGCGCGGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTATTAAAC 1061
Query 184105 GAAGGACTACGTGCATGGTTAGCACCTTCTGATCAACCACATGAGAATTTTATATTTCCA 184164
||||| | ||||| ||| | || || ||||| || ||||| || ||||||| ||
Sbjct 1060 GAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCT 1001
Query 184165 GAGGAGGTATTACCTAGAGGCAATGCTCTTTGATG 184199
|||||||| |||| | || || ||||||| |||
Sbjct 1000 GAGGAGGTTCTACCCCGTGGAAACGCTCTTTAATG 966
>seq15940
Length=20296
Score = 181 bits (200), Expect = 1e-40
Identities = 245/336 (73%), Gaps = 4/336 (1%)
Strand=Plus/Plus
Query 183868 TATTCTATGGTTACAGCGAATCGTTTCTGGTCACAAATCTTCGGGGTTGCGTTTAGCAAT 183927
||||| ||||| || || ||||| || ||||| |||||||| |||||||| ||| ||||
Sbjct 19769 TATTCAATGGTCACCGCTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAAT 19828
Query 183928 AAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTCATGGGTCTTTGGGTCTCTTCT 183987
|| |||||||| || ||||||||||| ||||| || || | ||| | ||| | | ||
Sbjct 19829 AAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGCT 19888
Query 183988 ATTGGCATCATTGGGCTTGCTCTT-AATCTTCGTGCTTATGATTTTGTAAGTCAAGAGAT 184046
|| | | | | || ||| ||| || || ||||| ||||| || || ||| || ||
Sbjct 19889 CTTTGGAGTAGTCGGTTTGGCCTTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAAAT 19948
Query 184047 CAGAGCAGCAGAAGATCCAGAA-TTTGAGACGTTCTACA-CAAAGAACATACTTCTTAAT 184104
| || || |||||||| ||| |||||||| ||||||| |||| || || || | ||
Sbjct 19949 TCGCGCGGCGGAAGATCCTGAATTTTGAGACTTTCTACACCAAAAAATATTCTATTAAAC 20008
Query 184105 GAAGGACTACGTGCATGGTTAGCACCTTCTGATCAACCACATG-AGAATTTTATATTTCC 184163
||||| | ||||| ||| | || || ||||| || |||| | || ||||||| ||
Sbjct 20009 GAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAAACCTTATATTCCC 20068
Query 184164 AGAGGAGGTATTACCTAGAGGCAATGCTCTTTGATG 184199
|||||||| |||| | || || ||||||| |||
Sbjct 20069 TGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAATG 20104
>seq8649
Length=8497
Score = 131 bits (144), Expect = 2e-25
Identities = 217/304 (71%), Gaps = 7/304 (2%)
Strand=Plus/Minus
Query 183902 AAATCTTCGGGGTT-GCGTTTAGC-AATAAGCGTTGGTTGC-ACTTC-TTTATGTTGTTT 183957
|| |||| |||||| || ||| | ||||| |||||||| | | ||| |||||||| |||
Sbjct 8483 AAGTCTTTGGGGTTTGCTTTTTCCTAATAAACGTTGGTTACTATTTCGTTTATGTTATTT 8424
Query 183958 GTTCCTGTCATG-GGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTTGCTCTT-AATC 184015
|| || || | ||| | ||| | | || |||| | | | || ||| ||| || |
Sbjct 8423 GTACCGGTTAACTGGTTTATGGATGAGTGCTCTTGGAGT-AGTCGGTTTGGCCTTGAACC 8365
Query 184016 TTCGTGCTTATGATTTTGTAAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGA 184075
| ||||| ||||| || || ||| || || | || || |||||||| ||||||||||
Sbjct 8364 TACGTGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCGGAAGATCCTGAATTTGAGA 8305
Query 184076 CGTTCTACACAAAGAACATACTTCTTAATGAAGGACTACGTGCATGGTTAGCACCTTCTG 184135
| |||||||| || || || || | || ||||| | ||||| ||| | || || |
Sbjct 8304 CTTTCTACACCAAAAATATTCTATTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAG 8245
Query 184136 ATCAACCACATGAGAATTTTATATTTCCAGAGGAGGTATTACCTAGAGGCAATGCTCTTT 184195
|||| || ||||| || ||||||| || |||||||| |||| | || || |||||||
Sbjct 8244 ATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTT 8185
Query 184196 GATG 184199
|||
Sbjct 8184 AATG 8181
>seq7755
Length=16682
Score = 120 bits (132), Expect = 4e-22
Identities = 150/207 (72%), Gaps = 8/207 (4%)
Strand=Plus/Plus
Query 183772 GCTATCCATGGTGTCACAGTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACA 183831
||||| || |||| || ||| | ||||| || | ||||||||| || ||||| |||
Sbjct 3579 GCTATTCAGGGTGCTACCGTATAAAATACTTTATTTGAAGATGGTGATGGCGCAAATACA 3638
Query 183832 TTCAAGGCATTTGATTCCACTCAAGAAGAAGAGACGTATTCTATGGTTACAGCGAATCGT 183891
||| || ||| | | ||||||| ||||| || ||||| ||||| || || |||||
Sbjct 3639 TTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAATCGC 3698
Query 183892 TTCTGGTCACAAATCTTCGGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATG 183951
|| ||||| | |||||||| ||| |||||| |||||||| || |||||||||
Sbjct 3699 TTTTGGTCCC--------GGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATG 3750
Query 183952 TTGTTTGTTCCTGTCATGGGTCTTTGG 183978
|| ||||| || || | ||| | |||
Sbjct 3751 TTATTTGTACCGGTAACTGGTTTATGG 3777
>seq13577
Length=50240
Score = 89.7 bits (98), Expect = 6e-13
Identities = 231/357 (65%), Gaps = 35/357 (10%)
Strand=Plus/Minus
Query 183772 GCTATCCATGGTGTCACAGTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACA 183831
||||| ||||||| || ||||| ||||| || | ||||||||| || | || |||
Sbjct 19490 GCTATTCATGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGACGCTTACA-- 19433
Query 183832 TTCAAGGCATTTGATTCCACTCAAGAAGAAGAGACGTATTCTATGGTTACAGCGAATCGT 183891
||| | | ||| | || ||||||| ||||| || ||||| ||||| || || |
Sbjct 19432 TTCCATGTTTTTAACTCAACTCAAGCTGAAGAAACTTATTCAATGGTGACTGC------T 19379
Query 183892 TTCTGGTCACAAATCTTCGGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATG 183951
|| ||| |||||| |||||||| || ||||||||
Sbjct 19378 TT-------------TTC--------------CAATAAACGTTGGTTACATTTCTTTATC 19346
Query 183952 TTGTTTGTTCCTGTCATGGGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTTGCTCTT 184011
|| ||||| || || | ||| | ||| | | || |||| | | | | || ||
Sbjct 19345 TTATTTGTACCGGTAACTGGTTTATGGATGAATGCTCTTGGAGTAGTCAGTTTGGCCTTT 19286
Query 184012 AATCTTCGTGCTTATGATTTTGTAAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTT 184071
|| || ||||| ||||| || || ||| || || | | || ||||||| ||||||
Sbjct 19285 AACCTACGTGCCTATGACTTCGTTTCTCAGGAAATTCGCGTGGCGAAAGATCCTGAATTT 19226
Query 184072 GAGACGTTCTACACAAAGAACATACTTCTTAATGAAGGACTACGTGCATGGTTAGCA 184128
||||| || ||||| || || || || | || |||||| | |||| ||| | |||
Sbjct 19225 GAGACTTTATACACCAAAAATATTCTATTAAACGAAGGAATTGGTGCTTGGATGGCA 19169
>seq18988
Length=14164
Score = 87.8 bits (96), Expect = 2e-12
Identities = 72/88 (82%), Gaps = 0/88 (0%)
Strand=Plus/Plus
Query 182693 TTGGGCAGATGTATTGAACCGTGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGC 182752
|||||| ||| | | ||||||||| ||||||||||||||||||||||| ||||| ||
Sbjct 7908 TTGGGCTGATATCATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGC 7967
Query 182753 ACACAACTTCCCACTAGATCTTGCTGCT 182780
||||| ||||| ||||| | ||||||
Sbjct 7968 TCACAATTTCCCTCTAGACTTAGCTGCT 7995
>seq12569
Length=659
Score = 87.8 bits (96), Expect = 2e-12
Identities = 177/258 (69%), Gaps = 5/258 (2%)
Strand=Plus/Plus
Query 183180 GTTCGATGTCCTTGATGACTGGGTTAAACGCGATCGCTTTGTCTTTGTGGGCTGGTCTGG 183239
||| ||| | | ||||||||| | | || || || || ||||| |||||||| ||
Sbjct 382 GTTTGATATTATGGATGACTGGTTACGTAGGGACCGTTTCGTTTTTGTAGGCTGGTCCGG 441
Query 183240 ACTCCTACTTCTTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGCACAGCTTT 183299
| | || |||| ||| ||| | || | || |||||| | || || ||| | ||
Sbjct 442 CTTATTGCTCTTTCCTTGTGCCTATTTCGCTGTAGGGGGTTGGTTCACGGGTACAACCTT 501
Query 183300 TGTTACGAGTTGGTATACCCATGGACTTGCTTCTTCCTATCTTGAAGG-TGCTAACTTTC 183358
||| || ||||||||||||||| | || ||||||| | ||||| ||| | ||||
Sbjct 502 TGTAACTTCATGGTATACCCATGGATTGGCCAGTTCCTATTTGGAAGGCTGC--AATTTC 559
Query 183359 TT-ACGGCAGCTGTCTCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTGTTACT-TTG 183416
|| || || || || || || |||||| | | | | |||||| | | ||||| ||
Sbjct 560 TTAACTGCTGCGGTTTCTACTCCTGCTAATAGTTTAGCACATTCTTTATTATTACTAGTG 619
Query 183417 GGGTCCTGAGTCTCAAGG 183434
||||||||| | |||||
Sbjct 620 GGGTCCTGAAGCACAAGG 637
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 611542502535000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |