Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Conyza_20canadensis_20[genbank_20GCA_5F000775935.1_202014-11-13]
20,075 sequences; 326,165,195 total letters
Query= NC_015289.1
Length=176184
Score E
Sequences producing significant alignments: (Bits) Value
seq20014 639 2e-178
seq20016 571 7e-158
seq2978 547 7e-151
seq2990 416 3e-111
seq2982 221 1e-52
seq15940 187 3e-42
seq12569 107 2e-18
seq13577 104 3e-17
seq7755 104 3e-17
seq18988 87.8 2e-12
seq8043 84.2 2e-11
seq6618 82.4 9e-11
>seq20014
Length=5322
Score = 639 bits (708), Expect = 2e-178
Identities = 724/968 (75%), Gaps = 2/968 (0%)
Strand=Plus/Minus
Query 164784 CACCAATAACCGTCTTTATGTCGGTTGGTTCGGTGTTCTTATGATCCCCTGTTTGCTCGC 164843
|||| | ||||||||||| | || ||||| || ||| | |||||||| || | |
Sbjct 1900 CACCGAAAACCGTCTTTACATTGGATGGTTTGGCGTTTTGATGATCCCTACCTTATTGAC 1841
Query 164844 CGCTACAATTTGT-TTTATTACTGCATTCATCGCTGCTCCCCCTGTGGACATTGATGGTA 164902
||| || | ||| ||||||| || ||||| |||||||| || || || ||||||||||
Sbjct 1840 CGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTA 1782
Query 164903 TTCGTGAACCTGTCGCAGGTTCTCTAATGTACGGTAACAACATCATCTCTGGTGCTGTCG 164962
||||||||||||| | || |||||| | || || ||||| || || || ||||| |
Sbjct 1781 TTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCGGGTGCCATTA 1722
Query 164963 TTCCGTCTTCTAACGCAATCGGACTTCACTTCTATCCTATTTGGGAAGCTGCAACCATGG 165022
|||| ||||| || || || | || || || || || |||||||| ||| | | |
Sbjct 1721 TTCCTACTTCTGCAGCTATAGGTTTGCATTTTTACCCAATATGGGAAGCAGCATCTGTTG 1662
Query 165023 ATGAATGGTTGTACAACGGTGGTCCTTACCAGTTGGTTGTCTTCCACTTCCTCATCGGTG 165082
|||||||||| ||||| ||||||||||| | | |||| | |||||| | | ||||
Sbjct 1661 ATGAATGGTTATACAATGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTG 1602
Query 165083 TAGCTTGCTACATGGGTCGTGAGTGGGAACTGTCTTACCGCCTCGGTATGCGTCCTTGGA 165142
||||||| ||||||||||||||||||||||| || ||| || |||||||| |||||||
Sbjct 1601 TAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGACCTTGGA 1542
Query 165143 TTTGCGTAGCATATAGCGCACCTGTCGCTGCTGCTGCCGCAGTTTTCCTGGTCTATCCTT 165202
|| || |||||| || ||||| || ||||| | || |||||| || |||| ||
Sbjct 1541 TTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTTGATCTACCCAA 1482
Query 165203 TCGGTCAAGGGAGTTTCTCTGATGGTATGCCTCTTGGTATCTCTGGTACTTTTAACTATA 165262
| |||||||| || || ||||||||||||||||| || || ||||||||||| |||| |
Sbjct 1481 TTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTCA 1422
Query 165263 TGTTCGTCTTCCAAGCAGAACATAACATTCTTATGCATCCGTTCCACATGCTCGGCGTTG 165322
|| | || ||||| || || || ||||| |||||||| || || |||||||| ||||| |
Sbjct 1421 TGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGCTAGGCGTAG 1362
Query 165323 CTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTTGTTACTTCCTCAC 165382
|||| |||||||| || || || || |||||||||||| | | || || ||
Sbjct 1361 CTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTT 1302
Query 165383 TCGTCCGCGAGACAACTGAAACAGAGAGTCAGAACTACGGTTATAAGTTTGGACAAGAAG 165442
| || | || || || |||| || | ||| | ||||| | || || |||||||
Sbjct 1301 TGATCAGGGAAACCACAGAAAATGAATCTGCTAACGAAGGTTACAGATTCGGTCAAGAAG 1242
Query 165443 AAGAGACCTATAACATCGTCGCTGCCCACGGGTACTTCGGTCGTCTCATTTTCCAATACG 165502
|||| || ||||| ||||| || || ||||| || || || || | || |||||||| |
Sbjct 1241 AAGAAACTTATAATATCGTAGCCGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATG 1182
Query 165503 CATCCTTCAACAATTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGTA 165562
| |||||||| || ||||| | || |||||||| || || ||||||||||| ||||
Sbjct 1181 CTAGTTTCAACAACTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTA 1122
Query 165563 TCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTGAACGGTTTCAACTTCA 165622
|||||||||||||| | ||| | ||||| ||||| |||||||| || |||||||| ||||
Sbjct 1121 TCTGGTTCACTGCTTTAGGTATCAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCA 1062
Query 165623 ACCAGTCTATTGTTGATAGTCAGAACAAAATCATCCCTACTTGGGCTGACGTTCTGAACC 165682
|||| || | ||||||||||| | | || ||||||||||| | | ||||
Sbjct 1061 ACCAATCAGTAGTTGATAGTCAAGGCCGTGTAATTAACACTTGGGCTGATATCATTAACC 1002
Query 165683 GTGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCTCACAACTTCCCCCTCGACC 165742
||||| || |||||||||||||||||||| ||||| |||||||| ||||| || |||
Sbjct 1001 GTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAATTTCCCTCTAGACT 942
Query 165743 TCGCTGCT 165750
| ||||||
Sbjct 941 TAGCTGCT 934
>seq20016
Length=17894
Score = 571 bits (632), Expect = 7e-158
Identities = 728/992 (73%), Gaps = 9/992 (1%)
Strand=Plus/Plus
Query 166191 GATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTCTTCCCAC-TGCTTATCTTGC 166249
|| |||||||||||||| || ||||| || ||| || |||| || ||| ||| | ||
Sbjct 13797 GACCGTTTCGTTTTTGTAGGCTGGTCCGG-CTTATTGCTCTTTCCTTGTGCCTATTTCGC 13855
Query 166250 TATTGGCGGTTGGCTCACTGGGACTACTTTCGTCACGAGTTGGTATACTCATGGACTCGC 166309
| | || |||||| |||| || || || || || || |||||||| |||||| | ||
Sbjct 13856 TGTAGGGGGTTGGTTCACGGGTACAACCTTTGTAACTTCATGGTATACCCATGGATTGGC 13915
Query 166310 AAGCAGTTATCTGGAGGG-TGCAAACTTTCTTA-CTGCGGCAGTTTCTACTCCAGCAGAT 166367
|| ||| |||| || ||||| ||||||| |||| || ||||||||||| || ||
Sbjct 13916 CAGTTCCTATTTGGAAGGCTGCAA--TTTCTTAACTGCTGCGGTTTCTACTCCTGCTAAT 13973
Query 166368 GCTATGGGTCATTCTCTACTTCTTCTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGG 166427
| | | |||||| || | | || ||||||||||| || ||||| ||||| |
Sbjct 13974 AGTTTAGCACATTCTTTATTATTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTCGT 14033
Query 166428 TGGTGCCAACTTGGAGGGCTTTGGGCCTTTGTTGCTCTCCACGGTGCTTTTGCCCTAATT 166487
||||| ||| | || || || ||| | ||||||||||||||||||||||| | |||||
Sbjct 14034 TGGTGTCAATTAGGCGGTCTGTGGACTTTTGTTGCTCTCCACGGTGCTTTCGGACTAATA 14093
Query 166488 GGTTTCATGCTTCGGCAGTTTGAAATCGCTCG-TCTAGTAGGTATTCGTCCGTACAATGC 166546
||||||||| | || || || ||| | ||||| ||| | | | || || || |||||
Sbjct 14094 GGTTTCATGTTACGTCAATTCGAACTTGCTCGATCTGTTCAAT-TGCGCCCTTATAATGC 14152
Query 166547 AATCGCTTTTTCTGGTCCTATTGCTGTCTTCGTTAGTGTCTTTCTCATCTACCCTCTGGG 166606
|||||| || |||||||| ||||| || || ||| ||| || || || || || || ||
Sbjct 14153 AATCGCATTCTCTGGTCCAATTGCCGTTTTTGTTTCTGTATTCCTGATTTATCCACTAGG 14212
Query 166607 TCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAATCTTCCGATTCCTCCT 166666
||| || ||||||| || || || ||| || || |||| || || ||||| ||||
Sbjct 14213 TCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGATTTATCCT 14272
Query 166667 TTTCCTTCAAGGATTCCACAACTGGACACTGAACCC-ATTTCATATGATGGGTGTAGCAG 166725
|| |||||||||| || ||||||||| ||||||| ||||||||||||||| || || |
Sbjct 14273 CTTTTTTCAAGGATTTCATAACTGGACATTGAACCCCATTTCATATGATGGGAGTTGCTG 14332
Query 166726 GTATTCTCGGTGGTGCATTGCTTTCTGCCATCCATGGTGTTACAGTAGAGAACACTCTGT 166785
|| | | || | ||| ||||| | || || ||||||| ||| ||||| || ||| | |
Sbjct 14333 GTGTATTGGGCGCTGCTTTGCTATGCGCTATTCATGGTGCTACTGTAGAAAATACTTTAT 14392
Query 166786 ATCAAGATGGTGAACAGGCAAATACTTTCAAGGCATTCGACTCTACTCAAGAGGAAGAAA 166845
| |||||||||| |||||||| ||| || || || | ||||||| |||||||
Sbjct 14393 TTGAAGATGGTGATGGCGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAA 14452
Query 166846 CCTATTCAATGGTTACAGCAAACCGCTATTGGTCTCAGATCTTCGGTATTGCGTTTAGTA 166905
| ||||||||||| || || || |||| |||||| || ||||| || |||| ||| |
Sbjct 14453 CTTATTCAATGGTCACCGCTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCA 14512
Query 166906 ATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATGGGTCTGTGGACAAGTT 166965
|||| | ||||| |||||||||||| | ||||| || || | ||| | |||| |||
Sbjct 14513 ATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTG 14572
Query 166966 CCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTTTCCCAAGAAC 167025
| | || | | ||| | || | ||||| ||||| |||||||| ||||| || |||
Sbjct 14573 CTCTTGGAGTAGTCGGTTTGGCCTTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAAA 14632
Query 167026 TAAGGGCAGCAGAGGATCCTGAGTTTGAAACCTTCTATACCAAGAACATTCTCTTGAATG 167085
| | || || || |||||||| ||||| || ||||| ||||| || ||||| || || |
Sbjct 14633 TTCGCGCGGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTATTAAACG 14692
Query 167086 AGGGTATGCGTTCTTGGATGGCAACTATCGATCAACCTCATGAGAGTTTCGTATTCCCTG 167145
| ||||| ||| |||||||||| || ||||| |||||||| | | |||||||||
Sbjct 14693 AAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTG 14752
Query 167146 AAGAGGTTCTTCCTAGAGGTAACGCTCTCTAA 167177
| |||||||| || | || |||||||| |||
Sbjct 14753 AGGAGGTTCTACCCCGTGGAAACGCTCTTTAA 14784
>seq2978
Length=1535
Score = 547 bits (606), Expect = 7e-151
Identities = 673/907 (74%), Gaps = 13/907 (1%)
Strand=Plus/Plus
Query 164856 TTTTATTACTGCATTCATCGCTG-CTCCCCCTGTGGACATTGAT-GGTATT-CGTGAACC 164912
|||||||| || ||||| |||| |||| || || || |||||| |||||| ||||||||
Sbjct 10 TTTTATTATCGCCTTCATTGCTGACTCCTCCAGTAGATATTGATAGGTATTACGTGAACC 69
Query 164913 TG---TCGCAGGTTCTCTAA--TGTACGGTAACAACATCATCTCTGGTGCTGTCGTTCCG 164967
| | | || ||||| | | || || ||||| || || || ||||| | ||||
Sbjct 70 TAGTTTTACTGGATCTCTTACTTTTATGG-AACAATATTATTTCGGGTGCCATTATTCCT 128
Query 164968 TCTTCTAACGCAATCGGACTTCACTTCTATCCTATTTGGGAAG-CTGCAACCATGGA-TG 165025
||||| || || || | || || || || || ||||||| | ||| | | || ||
Sbjct 129 ACTTCTGCAGCTATAGGTTTGCATTTTTACCCAATATGGGAAGGCAGCATCTGTTGAATG 188
Query 165026 AATGGTTGTACAAC-GGTGGTCCTTACCAGTTGGTTGTCTTCCACTTCCTCATCGGTGTA 165084
||||||| ||||| ||||||||||| | | |||| | |||||| | | ||||||
Sbjct 189 AATGGTTATACAATAGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTA 248
Query 165085 GCTTGCTACATGGGTCGTGAGTGGGAACTGTCTTACCGCCTCGGTATGCGTCCTTGGATT 165144
||||| ||||||||||||||||||||||| || ||| || |||||||| |||||||||
Sbjct 249 GCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGACCTTGGATT 308
Query 165145 TGCGTAGCATATAGCGCACCTGTCGCTGCTGCTGCCGCAGTTTTCCTGGTCTATCCTTTC 165204
|| |||||| || ||||| || ||||| | || |||||| || |||| || |
Sbjct 309 GCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTTGATCTACCCAATT 368
Query 165205 GGTCAAGGGAGTTTCTCTGATGGTATGCCTCTTGGTATCTCTGGTACTTTTAACTATATG 165264
|||||||| || || ||||||||||||||||| || || ||||||||||| |||| |||
Sbjct 369 GGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATG 428
Query 165265 TTCGTCTTCCAAGCAGAACATAACATTCTTATGCATCCGTTCCACATGCTCGGCGTTGCT 165324
| || ||||| || || || ||||| |||||||| || || |||||||| ||||| |||
Sbjct 429 ATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGCTAGGCGTAGCT 488
Query 165325 GGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTTGTTACTTCCTCACTC 165384
|| |||||||| || || || || |||||||||||| | | || || || |
Sbjct 489 GGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTG 548
Query 165385 GTCCGCGAGACAACTGAAACAGAGAGTCAGAACTACGGTTATAAGTTTGGACAAGAAGAA 165444
|| | || || || |||| || | ||| | ||||| | || || |||||||||
Sbjct 549 ATCAGGGAAACCACAGAAAATGAATCTGCTAACGAAGGTTACAGATTCGGTCAAGAAGAA 608
Query 165445 GAGACCTATAACATCGTCGCTGCCCACGGGTACTTCGGTCGTCTCATTTTCCAATACGCA 165504
|| || ||||| ||||| || || ||||| || || || || | || |||||||| ||
Sbjct 609 GAAACTTATAATATCGTAGCCGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCT 668
Query 165505 TCCTTCAACAATTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGTATC 165564
|||||||| || ||||| | || |||||||| || || ||||||||||| ||||||
Sbjct 669 AGTTTCAACAACTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATC 728
Query 165565 TGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTGAACGGTTTCAACTTCAAC 165624
|||||||||||| | ||| | ||||| ||||| |||||||| || |||||||| ||||||
Sbjct 729 TGGTTCACTGCTTTAGGTATCAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAAC 788
Query 165625 CAGTCTATTGTTGATAGTCAGAACAAAATCATCCCTACTTGGGCTGACGTTCTGAACCGT 165684
|| || | ||||||||||| | | || ||||||||||| | | ||||||
Sbjct 789 CAATCAGTAGTTGATAGTCAAGGCCGTGTAATTAACACTTGGGCTGATATCATTAACCGT 848
Query 165685 GCTGGTCTGGGTATGGAAGTTATGC-ATGAGCGTAACGCTCACAACTTCCCCCTCGACCT 165743
||| || |||||||||||||||| |||| ||||| |||||||| ||||| || ||| |
Sbjct 849 GCTAACCTTGGTATGGAAGTTATGCAATGAACGTAATGCTCACAATTTCCCTCTAGACTT 908
Query 165744 CGCTGCT 165750
||||||
Sbjct 909 AGCTGCT 915
>seq2990
Length=15620
Score = 416 bits (460), Expect = 3e-111
Identities = 506/686 (74%), Gaps = 3/686 (0%)
Strand=Plus/Plus
Query 164784 CACCAATAACCGTCTTTATGTCGGTTGGTTCGGTGTTCTTATGATCCCCTGTTTGCTCGC 164843
|||| | ||||||||||| | || ||||| || ||| | |||||||| || | |
Sbjct 14850 CACCGAAAACCGTCTTTACATTGGATGGTTTGGCGTTTTGATGATCCCTACCTTATTGAC 14909
Query 164844 CGCTACAATTTGT-TTTATTACTGCATTCATCGCTGCTCCCCCTGTGGACATTGATGGTA 164902
||| || | ||| ||||||| || ||||| |||||||| || || || ||||||||||
Sbjct 14910 CGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTA 14968
Query 164903 TTCGTGAACCTGTCGCAGGTTCTCTAATGTACGGTAACAACATCATCTCTGGTGCTGTCG 164962
||||||||||||| | || |||||| | || || ||||| || || || ||||| |
Sbjct 14969 TTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCGGGTGCCATTA 15028
Query 164963 TTCCGTCTTCTAACGCAATCGGACTTCACTTCTATCCTATTTGGGAAGCTGCAACCATGG 165022
|||| ||||| || || || | || || || || || |||||||| ||| | | |
Sbjct 15029 TTCCTACTTCTGCAGCTATAGGTTTGCATTTTTACCCAATATGGGAAGCAGCATCTGTTG 15088
Query 165023 ATGAATGGTTGTACAACGGTGGTCCTTACCAGTTGGTTGTCTTCCACTTCCTCATCGGTG 165082
|||||||||| ||||| ||||||||||| | | |||| | |||||| | | ||||
Sbjct 15089 ATGAATGGTTATACAATGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTG 15148
Query 165083 TAGCTTGCTACATGGGTCGTGAGTGGG-AACTGTCTTACCGCCTCGGTATGCGTCCTTGG 165141
||||||| ||||||||||||||||||| |||| || ||| || |||||||| ||||||
Sbjct 15149 TAGCTTGTTACATGGGTCGTGAGTGGGGAACTTAGTTTCCGTCTGGGTATGCGACCTTGG 15208
Query 165142 ATTTGCGTAGCATATAGCGCACCTGTCGCTGCTGCTGCCGCAGTTTTCCTGGTCTATCCT 165201
||| || |||||| || ||||| || ||||| | || |||||| || |||| ||
Sbjct 15209 ATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTTGATCTACCCA 15268
Query 165202 TTCGGTCAAGGGAGTTTCTCTGATGGTATGCCTCTTGGTATCTCTGGTACTTTTAACTAT 165261
| |||||||| || || ||||||||||||||||| || || ||||||||||| ||||
Sbjct 15269 ATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTC 15328
Query 165262 ATGTTCGTCTTCCAAGCAGAACATAACATTCTTATGCATCCGTTCCACATGCTCGGCGTT 165321
||| | || ||||| || || || ||||| |||||||| || || |||||||| |||||
Sbjct 15329 ATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGCTAGGCGTA 15388
Query 165322 GCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTTGTTACTTCCTCA 165381
||||| |||||||| || || || || |||||||||||| | | || || ||
Sbjct 15389 GCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGTTCTTTGGTAACCTCTAGT 15448
Query 165382 CTCGTCCGCGAGACAACTGAAACAGAGAGTCAGAACTACGGTTATAAGTTTGGACAAGAA 165441
| || | || || || |||| || | ||| | ||||| | || || ||||||
Sbjct 15449 TTGATCAGGGAAACCACAGAAAATGAATCTGCTAACGAAGGTTACAGATTCGGTCAAGAA 15508
Query 165442 GAAGAGACCTATAACATCGTCGCTGC 165467
||||| || ||||| ||||| || ||
Sbjct 15509 GAAGAAACTTATAATATCGTAGCCGC 15534
>seq2982
Length=1363
Score = 221 bits (244), Expect = 1e-52
Identities = 288/392 (73%), Gaps = 5/392 (1%)
Strand=Plus/Minus
Query 166789 AAGATGGTGAACAGGCAAATACTTTCAAGGCATTCGACTCTACTCAAGAG-GAAGAAACC 166847
|||||||||| |||||||| ||| || || || | |||||||| ||||||||
Sbjct 1357 AAGATGGTGATGGCGCAAATACATTCCGTGCTTTTAACCCAACTCAAGACTGAAGAAACT 1298
Query 166848 TATTC-AATGGT-TACAGCAAACCGCTATTGGTCTCAGATCTTCGGTATTGCGTTTAGTA 166905
||||| |||||| ||| || || || |||||| || ||||| || |||| ||| ||
Sbjct 1297 TATTCTAATGGTCTACCGCTAATCGTCTTTGGTC-CA-ATCTTTGGGGTTGCTTTTCCTA 1240
Query 166906 ATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATGGGTCTGTGGACAAGTT 166965
|||| | ||||| |||||||||||| | ||||| || || | ||| | |||| |||
Sbjct 1239 ATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTG 1180
Query 166966 CCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTTTCCCAAGAAC 167025
| | || | | ||| | || | ||||| ||||| |||||||| ||||| || |||
Sbjct 1179 CTCTTGGAGTAGTCGGTTTGGCCTTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAAA 1120
Query 167026 TAAGGGCAGCAGAGGATCCTGAGTTTGAAACCTTCTATACCAAGAACATTCTCTTGAATG 167085
| | || || || |||||||| ||||| || ||||| ||||| || ||||| || || |
Sbjct 1119 TTCGCGCGGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTATTAAACG 1060
Query 167086 AGGGTATGCGTTCTTGGATGGCAACTATCGATCAACCTCATGAGAGTTTCGTATTCCCTG 167145
| ||||| ||| |||||||||| || ||||| |||||||| | | |||||||||
Sbjct 1059 AAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTG 1000
Query 167146 AAGAGGTTCTTCCTAGAGGTAACGCTCTCTAA 167177
| |||||||| || | || |||||||| |||
Sbjct 999 AGGAGGTTCTACCCCGTGGAAACGCTCTTTAA 968
>seq15940
Length=20296
Score = 187 bits (206), Expect = 3e-42
Identities = 245/334 (73%), Gaps = 4/334 (1%)
Strand=Plus/Plus
Query 166848 TATTCAATGGTTACAGCAAACCGCTATTGGTCTCAGATCTTCGGTATTGCGTTTAGTAAT 166907
||||||||||| || || || |||| |||||| || ||||| || |||| ||| |||
Sbjct 19769 TATTCAATGGTCACCGCTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAAT 19828
Query 166908 AAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATGGGTCTGTGGACAAGTTC- 166966
|| | ||||| |||||||||||| | ||||| || || | ||| | |||| ||| |
Sbjct 19829 AAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGCT 19888
Query 166967 CATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTTTCCCAAGAACT 167026
| | || | | ||| | || | ||||| ||||| |||||||| ||||| || ||| |
Sbjct 19889 CTTTGGAGTAGTCGGTTTGGCCTTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAAAT 19948
Query 167027 AAGGGCAGCAGAGGATCCTG-AGTTTGAAACCTTCTATACC-AAGAACATTCTCTTGAAT 167084
| || || || ||||||| | ||||| || ||||| ||| || || ||||| || ||
Sbjct 19949 TCGCGCGGCGGAAGATCCTGAATTTTGAGACTTTCTACACCAAAAAATATTCTATTAAAC 20008
Query 167085 GAGGGTATGCGTTCTTGGATGGCAACTATCGATCAACCTCATG-AGAGTTTCGTATTCCC 167143
|| ||||| ||| |||||||||| || ||||| ||||||| | | | |||||||
Sbjct 20009 GAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAAACCTTATATTCCC 20068
Query 167144 TGAAGAGGTTCTTCCTAGAGGTAACGCTCTCTAA 167177
||| |||||||| || | || |||||||| |||
Sbjct 20069 TGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAA 20102
>seq12569
Length=659
Score = 107 bits (118), Expect = 2e-18
Identities = 165/228 (72%), Gaps = 7/228 (3%)
Strand=Plus/Plus
Query 166191 GATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTT-CTTCTTCCCACTGCTTATCTTGC 166249
|| |||||||||||||| || ||||| || ||| || || |||| ||| ||| | ||
Sbjct 413 GACCGTTTCGTTTTTGTAGGCTGGTCCGG-CTTATTGCTCTTTCCTTGTGCCTATTTCGC 471
Query 166250 TATTGGCGGTTGGCTCACTGGGACTACTTTCGTCACGAGTTGGTATACTCATGGACTCGC 166309
| | || |||||| |||| || || || || || || |||||||| |||||| | ||
Sbjct 472 TGTAGGGGGTTGGTTCACGGGTACAACCTTTGTAACTTCATGGTATACCCATGGATTGGC 531
Query 166310 AAGCAGTTATCTGG-AGGGTGCAAACTTTCTT-ACTGCGGCAGTTTCTACTCCAGCAGAT 166367
|| ||| ||| ||| ||||| |||||| ||||| || ||||||||||| || ||
Sbjct 532 CAGTTCCTATTTGGAAGGCTGCAA--TTTCTTAACTGCTGCGGTTTCTACTCCTGCTAAT 589
Query 166368 GCTATGGGTCATTCTCTACTTCTTCT-CTGGGGTCCTGAGGCTCAAGG 166414
| | | |||||| || | | || ||||||||||| || |||||
Sbjct 590 AGTTTAGCACATTCTTTATTATTACTAGTGGGGTCCTGAAGCACAAGG 637
>seq13577
Length=50240
Score = 104 bits (114), Expect = 3e-17
Identities = 238/367 (65%), Gaps = 35/367 (10%)
Strand=Plus/Minus
Query 166743 TTGCTTTCTGCCATCCATGGTGTTACAGTAGAGAACACTCTGTATCAAGATGGTGAACAG 166802
||||| | || || ||||||| ||| ||||| || ||| | | | |||||||||| |
Sbjct 19499 TTGCTATGCGCTATTCATGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGAC 19440
Query 166803 GCAAATACTTTCAAGGCATTCGACTCTACTCAAGAGGAAGAAACCTATTCAATGGTTACA 166862
|| ||| ||| | | || |||| ||||||| |||||||| ||||||||||| ||
Sbjct 19439 GCT--TACATTCCATGTTTTTAACTCAACTCAAGCTGAAGAAACTTATTCAATGGTGAC- 19383
Query 166863 GCAAACCGCTATTGGTCTCAGATCTTCGGTATTGCGTTTAGTAATAAGAGGTGGTTGCAT 166922
||| ||| ||||| | ||||| |||
Sbjct 19382 --------------------------------TGCTTTTTCCAATAAACGTTGGTTACAT 19355
Query 166923 TTCTTTATGCTGTTTGTTCCTGTTATGGGTCTGTGGACAAGTTCCATCGGTATTATTGGT 166982
|||||||| | ||||| || || | ||| | |||| | | | | || | | ||
Sbjct 19354 TTCTTTATCTTATTTGTACCGGTAACTGGTTTATGGATGAATGCTCTTGGAGTAGTCAGT 19295
Query 166983 CTTGCTCTCAACCTTCGTGCTTATGACTTTGTTTCCCAAGAACTAAGGGCAGCAGAGGAT 167042
| || | ||||| ||||| |||||||| ||||| || ||| | | | || | |||
Sbjct 19294 TTGGCCTTTAACCTACGTGCCTATGACTTCGTTTCTCAGGAAATTCGCGTGGCGAAAGAT 19235
Query 167043 CCTGAGTTTGAAACCTTCTATACCAAGAACATTCTCTTGAATGAGGGTATGCGTTCTTGG 167102
||||| ||||| || || || ||||| || ||||| || || || || || || |||||
Sbjct 19234 CCTGAATTTGAGACTTTATACACCAAAAATATTCTATTAAACGAAGGAATTGGTGCTTGG 19175
Query 167103 ATGGCAA 167109
|||||||
Sbjct 19174 ATGGCAA 19168
>seq7755
Length=16682
Score = 104 bits (114), Expect = 3e-17
Identities = 147/208 (71%), Gaps = 8/208 (4%)
Strand=Plus/Plus
Query 166752 GCCATCCATGGTGTTACAGTAGAGAACACTCTGTATCAAGATGGTGAACAGGCAAATACT 166811
|| || || |||| ||| ||| | || ||| | | | |||||||||| ||||||||
Sbjct 3579 GCTATTCAGGGTGCTACCGTATAAAATACTTTATTTGAAGATGGTGATGGCGCAAATACA 3638
Query 166812 TTCAAGGCATTCGACTCTACTCAAGAGGAAGAAACCTATTCAATGGTTACAGCAAACCGC 166871
||| || || || | ||||||| |||||||| ||||||||||| || || || |||
Sbjct 3639 TTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAATCGC 3698
Query 166872 TATTGGTCTCAGATCTTCGGTATTGCGTTTAGTAATAAGAGGTGGTTGCATTTCTTTATG 166931
| |||||| ||| |||| ||| ||||| | ||||| ||||||||||||
Sbjct 3699 TTTTGGTC--------CCGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATG 3750
Query 166932 CTGTTTGTTCCTGTTATGGGTCTGTGGA 166959
| ||||| || || | ||| | ||||
Sbjct 3751 TTATTTGTACCGGTAACTGGTTTATGGA 3778
>seq18988
Length=14164
Score = 87.8 bits (96), Expect = 2e-12
Identities = 72/88 (82%), Gaps = 0/88 (0%)
Strand=Plus/Plus
Query 165663 TTGGGCTGACGTTCTGAACCGTGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGC 165722
||||||||| | | ||||||||| || |||||||||||||||||||| ||||| ||
Sbjct 7908 TTGGGCTGATATCATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGC 7967
Query 165723 TCACAACTTCCCCCTCGACCTCGCTGCT 165750
|||||| ||||| || ||| | ||||||
Sbjct 7968 TCACAATTTCCCTCTAGACTTAGCTGCT 7995
>seq8043
Length=8436
Score = 84.2 bits (92), Expect = 2e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 161698 TGGGTCAGTAGCTCAGCGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGTAGGTTCGAT 161757
|| ||| ||||||||| ||||||||| ||| | |||||||| ||||||||||||||
Sbjct 7616 TGCGTCTGTAGCTCAGTGGATAGAGCGTCTGTTTCCTAAGCAGAAGGTCGTAGGTTCGAC 7557
Query 161758 CCCTACCTGACCCGTT 161773
||||||||||| ||||
Sbjct 7556 CCCTACCTGACGCGTT 7541
>seq6618
Length=24737
Score = 82.4 bits (90), Expect = 9e-11
Identities = 84/110 (76%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 166689 TGGACACTGAACCCATTTCATATGATGGGTGTAGCAGGTATTCTCGGTGGTGCATTGCTT 166748
|||||| |||||||||||||||||||||| || || ||| | | || | ||| |||||
Sbjct 24100 TGGACATTGAACCCATTTCATATGATGGGAGTTGCTGGTGTATTGGGCGCTGCTTTGCTA 24041
Query 166749 TCTGCCATCCATGGTGTTACAGTAGAGAACACTCTGTATCAAGATGGTGA 166798
| | || ||||||| ||| |||| || ||| | | | ||||||||||
Sbjct 24040 TGCACTATTCATGGTGCTACCATAGAAAATACTTTATTTGAAGATGGTGA 23991
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 563519356368000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |