Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Conyza_20canadensis_20[genbank_20GCA_5F000775935.1_202014-11-13]
20,075 sequences; 326,165,195 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq13411 179 3e-40
seq5340 179 3e-40
seq8889 141 7e-29
seq8384 141 7e-29
seq7910 141 7e-29
seq16550 132 4e-26
seq4675 131 1e-25
seq4586 131 1e-25
seq16006 125 6e-24
seq14670 116 3e-21
seq6802 116 3e-21
seq6637 116 3e-21
seq5280 116 3e-21
seq10926 113 4e-20
seq1845 98.7 8e-16
seq6710 87.8 1e-12
>seq13411
Length=19963
Score = 179 bits (198), Expect = 3e-40
Identities = 176/227 (78%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| || | ||||||||| || |||||||| || ||||||||||| |||||||| |||||
Sbjct 11488 CCGCCACGTAAACGTAAGACCAAATGAAGAGTGGATTCTTTTTGGATATTGTAGTCGGCT 11429
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || ||| | || || | ||| || |||||||| || ||||| ||||| || || ||
Sbjct 11428 AATGTCCTGCCGTCTTCAAGTTGTTTGCCTGCAAAGATTAAACGTTGTTGGTCTGGTGGG 11369
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
||||||||||| |||||||| || ||| ||| | || | ||||| || | ||| |||
Sbjct 11368 ATGCCTTCTTTGTCTTGAATCTTGGCTTTCACATTGTCGATTGTGTCGGAGGATTCGACT 11309
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| | || | |||||||||||||| |||||||| || ||||||||
Sbjct 11308 TCTAAGGTTATTGTTTTGCCGGTTAAGGTTTTTACGAAGATCTGCAT 11262
>seq5340
Length=22833
Score = 179 bits (198), Expect = 3e-40
Identities = 176/227 (78%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| || | ||||||||| || |||||||| || ||||||||||| |||||||| |||||
Sbjct 14263 CCGCCACGTAAACGTAAGACCAAATGAAGAGTGGATTCTTTTTGGATATTGTAGTCGGCT 14322
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || ||| | || || | ||| || |||||||| || ||||| ||||| || || ||
Sbjct 14323 AATGTCCTGCCGTCTTCAAGTTGTTTGCCTGCAAAGATTAAACGTTGTTGGTCTGGTGGG 14382
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
||||||||||| |||||||| || ||| ||| | || | ||||| || | ||| |||
Sbjct 14383 ATGCCTTCTTTGTCTTGAATCTTGGCTTTCACATTGTCGATTGTGTCGGAGGATTCGACT 14442
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| | || | |||||||||||||| |||||||| || ||||||||
Sbjct 14443 TCTAAGGTTATTGTTTTGCCGGTTAAGGTTTTTACGAAGATCTGCAT 14489
>seq8889
Length=9065
Score = 141 bits (156), Expect = 7e-29
Identities = 156/208 (75%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325
||| ||||| || || ||||| || ||||| || || | |||||| |||| || | ||
Sbjct 1819 ATGGAGGGTCGACTCCTTTTGGATGTTGTAGTCTGCCAACGTTCTGCCATCTTCAAGCTG 1760
Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385
|||||| ||||| ||||| | ||| || || || || || ||||| ||||||||||| ||
Sbjct 1759 CTTACCAGCAAAGATCAATCTCTGCTGGTCTGGGGGGATACCTTCCTTATCTTGAATCTT 1700
Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445
| ||| ||| | || | ||||||||| |||| || || | ||||| ||||| || ||
Sbjct 1699 TGCTTTGACATTGTCAATAGTGTCAGAGCTTTCGACCTCCAAAGTGATGGTTTTCCCTGT 1640
Query 101446 TAAAGTTTTTACAAATATCTGCATGGTT 101473
|| || || || || ||||||||| ||
Sbjct 1639 CAATGTCTTGACGAAGATCTGCATGTTT 1612
Score = 120 bits (132), Expect = 2e-22
Identities = 149/203 (73%), Gaps = 1/203 (0%)
Strand=Plus/Minus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
||||||||||| || || || || |||||||| || | || | |||| ||||||||
Sbjct 2273 TGAAGGGTAGACTCCTTCTGAATGTTGTAATCAGCAAGTGTCCGTCCATCTTCCAATTGT 2214
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
||||| ||||| || | | ||| || || || || || || || ||||| ||||| ||
Sbjct 2213 TTACCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATCCCCTCCTTATCCTGAATCTTG 2154
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| ||| | || | ||| ||||| | ||||| || | ||||| ||||| || ||
Sbjct 2153 GCCTTGACATTGTCAATAGTATCAGAAGACTCCACCTCCAAAGTGATGGTTTTTCCTGTC 2094
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
|||||||| ||||| ||||||||
Sbjct 2093 AAAGTTTTAACAAA-ATCTGCAT 2072
>seq8384
Length=24589
Score = 141 bits (156), Expect = 7e-29
Identities = 153/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|||||||| || || || || || ||||||||||| | || || |||| |||| |||
Sbjct 4244 TGAAGGGTGGACTCCTTCTGAATGTTGTAATCGGCAAGCGTCCTACCATCTTCCAGTTGT 4185
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
||||| ||||||||||| | ||| || || || || || || || ||||| ||||| ||
Sbjct 4184 TTACCAGCAAATATCAACCTCTGCTGGTCCGGTGGGATCCCCTCCTTATCCTGAATCTTG 4125
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| ||| | || | ||| ||||||| |||||| || | ||||| ||||| || ||
Sbjct 4124 GCCTTGACATTATCAATAGTATCAGACGATTCCACCTCCAAAGTGATGGTTTTCCCTGTC 4065
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
|| ||||| ||||| ||||||||
Sbjct 4064 AAGGTTTTAACAAAGATCTGCAT 4042
Score = 131 bits (144), Expect = 1e-25
Identities = 155/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319
||| | ||| ||||| ||||| ||||| || ||||||||||| | || | | || ||
Sbjct 3567 AACAAGATGGAGGGTTGATTCCTTTTGAATGTTGTAATCGGCCAAGGTACGACCGTCCTC 3508
Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379
| ||||| || ||||| ||||| | ||| || || || || || |||||||| |||||
Sbjct 3507 GAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGGATCCCTTCTTTGTCTTG 3448
Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439
||||| || ||| | || | ||||||||| | || ||||| ||||||| |||||
Sbjct 3447 GATTTTCGCCTTAACATTATCGATAGTGTCAGAGCTCTCGACTTCGAGAGTGATGGTTTT 3388
Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || | ||| || ||||| ||||||||
Sbjct 3387 ACCAGTAAGAGTCTTAACAAAGATCTGCAT 3358
Score = 102 bits (112), Expect = 6e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313
||| | ||| | ||| |||||||| || || || || || ||||| || | ||| | |
Sbjct 4029 ACGAAGAACCAGATGGAGGGTAGACTCCTTCTGAATGTTATAATCAGCCAAAGTACGTCC 3970
Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373
|| || | ||||| || ||||| ||||| | ||| || || || || || ||||| ||
Sbjct 3969 GTCCTCAAGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCTGGTGGGATTCCTTCCTT 3910
Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433
|||||| || ||| || || | || | || || || | || || || | ||| |
Sbjct 3909 ATCTTGGATCTTTGCCTTGACGTTGTCAATGGTATCCGAACTCTCAACCTCCAAAGTAAT 3850
Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
||||| || || || ||||| ||||||||||||||
Sbjct 3849 TGTTTTTCCTGTCAAGGTTTTCACAAATATCTGCAT 3814
>seq7910
Length=9655
Score = 141 bits (156), Expect = 7e-29
Identities = 153/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|||||||| || || || || || ||||||||||| | || || |||| |||| |||
Sbjct 2480 TGAAGGGTGGACTCCTTCTGAATGTTGTAATCGGCAAGCGTCCTACCATCTTCCAGTTGT 2421
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
||||| ||||||||||| | ||| || || || || || || || ||||| ||||| ||
Sbjct 2420 TTACCAGCAAATATCAACCTCTGCTGGTCCGGTGGGATCCCCTCCTTATCCTGAATCTTG 2361
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| ||| | || | ||| ||||||| |||||| || | ||||| ||||| || ||
Sbjct 2360 GCCTTGACATTATCAATAGTATCAGACGATTCCACCTCCAAAGTGATGGTTTTCCCTGTC 2301
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
|| ||||| ||||| ||||||||
Sbjct 2300 AAGGTTTTAACAAAGATCTGCAT 2278
Score = 131 bits (144), Expect = 1e-25
Identities = 155/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319
||| | ||| ||||| ||||| ||||| || ||||||||||| | || | | || ||
Sbjct 1803 AACAAGATGGAGGGTTGATTCCTTTTGAATGTTGTAATCGGCCAAGGTACGACCGTCCTC 1744
Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379
| ||||| || ||||| ||||| | ||| || || || || || |||||||| |||||
Sbjct 1743 GAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGGATCCCTTCTTTGTCTTG 1684
Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439
||||| || ||| | || | ||||||||| | || ||||| ||||||| |||||
Sbjct 1683 GATTTTCGCCTTAACATTATCGATAGTGTCAGAGCTCTCGACTTCGAGAGTGATGGTTTT 1624
Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || | ||| || ||||| ||||||||
Sbjct 1623 ACCAGTAAGAGTCTTAACAAAGATCTGCAT 1594
Score = 102 bits (112), Expect = 6e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313
||| | ||| | ||| |||||||| || || || || || ||||| || | ||| | |
Sbjct 2265 ACGAAGAACCAGATGGAGGGTAGACTCCTTCTGAATGTTATAATCAGCCAAAGTACGTCC 2206
Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373
|| || | ||||| || ||||| ||||| | ||| || || || || || ||||| ||
Sbjct 2205 GTCCTCAAGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCTGGTGGGATTCCTTCCTT 2146
Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433
|||||| || ||| || || | || | || || || | || || || | ||| |
Sbjct 2145 ATCTTGGATCTTTGCCTTGACGTTGTCAATGGTATCCGAACTCTCAACCTCCAAAGTAAT 2086
Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
||||| || || || ||||| ||||||||||||||
Sbjct 2085 TGTTTTTCCTGTCAAGGTTTTCACAAATATCTGCAT 2050
>seq16550
Length=20979
Score = 132 bits (146), Expect = 4e-26
Identities = 159/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313
||| | ||| ||||| || || || || ||||| || |||||||| || | || | |
Sbjct 17915 ACGAAGAACCAAATGCAGAGTCGACTCCTTTTGAATGTTGTAATCAGCAAGGGTACGCCC 17974
Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373
||| || | ||||| || ||||| |||| | |||||| || || || || ||||| ||
Sbjct 17975 ATCCTCAAGCTGCTTTCCAGCAAAGATCAGCCTCTGTTGGTCTGGTGGGATCCCTTCCTT 18034
Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433
||||||||| ||| || ||| | || | ||| || || |||| || || | |||||
Sbjct 18035 ATCTTGAATCTTTGCCTTGACATTATCAATAGTATCCGAGCTTTCAACCTCCAAAGTGAT 18094
Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
||||| || || |||||||||||||| ||||||||
Sbjct 18095 GGTTTTCCCTGTCAAAGTTTTTACAAAAATCTGCAT 18130
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| || || || || | || || ||||||||||| || || || || ||||| || ||
Sbjct 17448 CCACCCCTCAACCGCAGTACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCTGCC 17507
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| ||| | |||| || | ||| || |||||||| || | | || || || || ||
Sbjct 17508 AAAGTACGCCCATCTTCGAGTTGTTTTCCTGCAAAGATAAGCCTTTGCTGGTCTGGTGGG 17567
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| ||||||||||| ||||| || || ||| | || | || ||||| |||| ||
Sbjct 17568 ATTCCTTCTTTATCCTGAATCTTAGCCTTGACATTGTCAATCGTATCAGAACTTTCAACC 17627
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| | ||||| ||||| ||||| || || || ||||| ||||||||
Sbjct 17628 TCTAAAGTGATTGTTTTTCCGGTCAACGTCTTGACAAAAATCTGCAT 17674
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
|| || || || || ||||| || || || || ||||| || | || ||| |||| ||
Sbjct 18150 ACCAAGTGCAGAGTTGATTCCTTCTGGATGTTATAATCTGCCAAGGTCCTGCCATCCTCG 18209
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
| |||||| || ||||| ||||| | ||| || || || || || ||||| |||||||||
Sbjct 18210 AGTTGCTTGCCAGCAAAAATCAATCTCTGCTGGTCTGGTGGGATCCCTTCCTTATCTTGA 18269
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
|| || || ||| | || | ||||| || |||| || || | ||| | || ||
Sbjct 18270 ATCTTCGCCTTAACATTATCGATTGTGTCTGAGCTTTCGACCTCCAAAGTAATGGTCTTT 18329
Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || || || || ||||| ||||||||
Sbjct 18330 CCTGTCAACGTCTTGACAAAGATCTGCAT 18358
Score = 102 bits (112), Expect = 6e-17
Identities = 145/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325
||| || ||||| || || || || || ||||| || | || ||| |||| || | ||
Sbjct 17699 ATGGAGTGTAGACTCCTTCTGAATGTTATAATCTGCCAACGTCCTGCCATCTTCAAGCTG 17758
Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385
||||||||||| || | | ||| ||||| || || || || || |||||||| |||||
Sbjct 17759 TTTACCTGCAAAGATAAGCCTCTGCTGATCTGGTGGGATCCCCTCCTTATCTTGGATTTT 17818
Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445
|| ||| | || | || || || | || ||||| | ||||| || || || ||
Sbjct 17819 GGCCTTGACATTATCGATGGTATCTGAGCTCTCGACTTCCAAAGTGATTGTCTTTCCAGT 17878
Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469
|| ||||| ||||| ||||||||
Sbjct 17879 CAAGGTTTTCACAAAGATCTGCAT 17902
>seq4675
Length=16269
Score = 131 bits (144), Expect = 1e-25
Identities = 155/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319
||| | ||| ||||| ||||| ||||| || ||||||||||| | || | | || ||
Sbjct 15954 AACAAGATGGAGGGTTGATTCCTTTTGAATGTTGTAATCGGCCAAGGTACGACCGTCCTC 15895
Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379
| ||||| || ||||| ||||| | ||| || || || || || |||||||| |||||
Sbjct 15894 GAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGGATCCCTTCTTTGTCTTG 15835
Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439
||||| || ||| | || | ||||||||| | || ||||| ||||||| |||||
Sbjct 15834 GATTTTCGCCTTAACATTATCGATAGTGTCAGAGCTCTCGACTTCGAGAGTGATGGTTTT 15775
Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || | ||| || ||||| ||||||||
Sbjct 15774 ACCAGTAAGAGTCTTAACAAAGATCTGCAT 15745
>seq4586
Length=18721
Score = 131 bits (144), Expect = 1e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| || || ||||| | || || |||||||| ||||| || || || ||||| || ||
Sbjct 13881 CCACCCCTCAAACGAAGCACCAAGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCAGCA 13940
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || | | || || | || || || ||||| |||| | ||| ||||| || |||
Sbjct 13941 AGGGTACGACCGTCCTCAAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGA 14000
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| |||||||| |||||||| || || ||| | || | |||||||| | |||||
Sbjct 14001 ATCCCTTCTTTGTCTTGAATCTTGGCCTTAACATTGTCAATGGTGTCAGAGCTCTCCACC 14060
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| ||||||| || || || || |||||||| ||||||||||||||
Sbjct 14061 TCGAGAGTGATGGTCTTTCCAGTCAAAGTTTTCACAAATATCTGCAT 14107
>seq16006
Length=16259
Score = 125 bits (138), Expect = 6e-24
Identities = 150/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325
||| ||||| || ||||| || || |||||||| || | || ||| |||| |||| ||
Sbjct 13694 ATGGAGGGTCGACTCTTTCTGAATGTTGTAATCAGCAAGGGTCCTGCCATCTTCCAGCTG 13635
Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385
|||||| ||||||||||| | ||| || || || || || ||||| ||||||||||| ||
Sbjct 13634 CTTACCAGCAAATATCAACCTCTGCTGGTCCGGTGGGATACCTTCCTTATCTTGAATCTT 13575
Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445
|| || | || | || || || |||| || || | ||||| || || |||||
Sbjct 13574 GGCCTTGACGTTGTCAATCGTATCGGAGCTTTCTACCTCCAAAGTGATGGTCTTTCCGGT 13515
Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469
|| ||||| || || ||||||||
Sbjct 13514 CAAGGTTTTCACGAAAATCTGCAT 13491
Score = 120 bits (132), Expect = 2e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
|| ||||| | || || |||||||| || ||||| ||||| | || ||| |||| ||
Sbjct 13243 ACCAAATGCAATGTGGACTCTTTTTGGATGTTGTAGTCGGCCAGGGTCCTGCCATCCTCG 13184
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
| |||||| || ||||| ||||| | || || || ||||| || ||||||||||||||
Sbjct 13183 AGTTGCTTGCCAGCAAAAATCAACCTTTGCTGGTCTGGCGGGATCCCTTCTTTATCTTGG 13124
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
|| ||| || || | || | |||||||| |||| || || | ||||| || ||
Sbjct 13123 ATCTTTGCCTTGACGTTGTCAATGGTGTCAGAGCTTTCGACCTCCAAAGTGATGGTCTTC 13064
Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || ||||| || || || || |||||
Sbjct 13063 CCTGTCAAAGTCTTGACGAAGATTTGCAT 13035
Score = 120 bits (132), Expect = 2e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
|| |||||||||||||| ||||| || |||||||| || || | ||| | |||| ||
Sbjct 13471 ACCAAATGAAGGGTAGACTCTTTCTGGATATTGTAGTCTGCTAGAGTACGCCCATCTTCG 13412
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
| || || |||||||| || | | || || || ||||| || || |||||||| |||
Sbjct 13411 AGCTGTTTTCCTGCAAAGATAAGCCTTTGCTGGTCTGGCGGGATCCCCTCTTTATCCTGA 13352
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
|| || || || | || | || ||||| |||| || || | ||||| |||||
Sbjct 13351 ATCTTAGCCTTGACGTTGTCAATCGTATCAGAACTTTCAACCTCTAAAGTGATGGTTTTT 13292
Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || || ||||| ||||||||||||||
Sbjct 13291 CCTGTCAAGGTTTTCACAAATATCTGCAT 13263
>seq14670
Length=61898
Score = 116 bits (128), Expect = 3e-21
Identities = 114/147 (78%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300
|||| ||||| || | ||||| | |||||| || ||||| ||||| ||||||||||| |
Sbjct 31898 TTCCACCTCTCAATCTCAAAACGAGATGAAGCGTCGATTCCTTTTGGATATTGTAATCAG 31957
Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360
| | ||||| |||| || ||||| || || ||||||||||| | |||||||| ||||
Sbjct 31958 CAAGTGTTCTTCCATCTTCTAATTGTTTCCCAGCAAATATCAATCTTTGTTGATCAGGCG 32017
Query 101361 GAATGCCTTCTTTATCTTGAATTTTTT 101387
|||| || ||||| || | || ||||
Sbjct 32018 GAATTCCCTCTTTGTCCTAAAAATTTT 32044
>seq6802
Length=18417
Score = 116 bits (128), Expect = 3e-21
Identities = 114/147 (78%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300
|||| ||||| || | ||||| | |||||| || ||||| ||||| ||||||||||| |
Sbjct 11286 TTCCACCTCTCAATCTCAAAACGAGATGAAGCGTCGATTCCTTTTGGATATTGTAATCAG 11227
Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360
| | ||||| |||| || ||||| || || ||||||||||| | |||||||| ||||
Sbjct 11226 CAAGTGTTCTTCCATCTTCTAATTGTTTCCCAGCAAATATCAATCTTTGTTGATCAGGCG 11167
Query 101361 GAATGCCTTCTTTATCTTGAATTTTTT 101387
|||| || ||||| || | || ||||
Sbjct 11166 GAATTCCCTCTTTGTCCTAAAAATTTT 11140
>seq6637
Length=15695
Score = 116 bits (128), Expect = 3e-21
Identities = 114/147 (78%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300
|||| ||||| || | ||||| | |||||| || ||||| ||||| ||||||||||| |
Sbjct 3998 TTCCACCTCTCAATCTCAAAACGAGATGAAGCGTCGATTCCTTTTGGATATTGTAATCAG 3939
Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360
| | ||||| |||| || ||||| || || ||||||||||| | |||||||| ||||
Sbjct 3938 CAAGTGTTCTTCCATCTTCTAATTGTTTCCCAGCAAATATCAATCTTTGTTGATCAGGCG 3879
Query 101361 GAATGCCTTCTTTATCTTGAATTTTTT 101387
|||| || ||||| || | || ||||
Sbjct 3878 GAATTCCCTCTTTGTCCTAAAAATTTT 3852
>seq5280
Length=29361
Score = 116 bits (128), Expect = 3e-21
Identities = 148/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325
||||||||| || || || || ||||||||||| || | || | |||| ||||||||
Sbjct 6975 ATGAAGGGTGGACTCCTTCTGAATATTGTAATCTGCAAGTGTACGTCCATCTTCCAATTG 6916
Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385
|| || || || ||||| | ||| ||||| || || || || || ||||| ||||| ||
Sbjct 6915 TTTCCCAGCGAAGATCAACCTCTGCTGATCTGGTGGGATCCCCTCCTTATCCTGAATCTT 6856
Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445
|| ||| | || | || ||||| | ||||| || | ||||| ||||| || ||
Sbjct 6855 GGCCTTGACATTGTCAATCGTATCAGAAGACTCCACCTCCAAAGTGATGGTTTTCCCTGT 6796
Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469
|| || || ||||| ||||||||
Sbjct 6795 CAAGGTCTTCACAAAAATCTGCAT 6772
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
||||| || || | | || | ||| ||||| ||||| ||||| |||||||| || ||
Sbjct 6542 CCTCCCCTCAACCTCAGCACAAGATGGAGGGTCGATTCCTTTTGGATATTGTAGTCTGCC 6483
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || | |||| || | ||||| || ||||| || | | ||| || || || ||
Sbjct 6482 AATGTGCGACCATCCTCAAGCTGCTTTCCGGCAAAGATGAGCCTCTGCTGGTCTGGGGGG 6423
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| ||||| || ||||| ||||| || ||| | || | || || || | || |||
Sbjct 6422 ATCCCTTCCTTGTCTTGGATTTTCGCCTTAACATTATCGATGGTATCTGAGCTCTCGACT 6363
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|||||||||| || || || || | |||||| ||||| ||||||||
Sbjct 6362 TCAAGAGTGATGGTCTTACCAGTGAGAGTTTTAACAAAGATCTGCAT 6316
>seq10926
Length=11099
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| || || || || | || || ||||||||||| || || || || ||||| || ||
Sbjct 8028 CCACCCCTCAACCGCAGTACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCTGCC 8087
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| ||| | |||| || | ||| || |||||||| || | | || || || || ||
Sbjct 8088 AAAGTACGCCCATCTTCGAGTTGTTTTCCTGCAAAGATAAGCCTTTGCTGGTCTGGTGGG 8147
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| ||||||||||| ||||| || || ||| | || | || ||||| |||| ||
Sbjct 8148 ATTCCTTCTTTATCCTGAATCTTAGCCTTGACATTGTCAATCGTATCAGAACTTTCAACC 8207
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| | ||||| ||||| ||||| || || || ||||| ||||||||
Sbjct 8208 TCTAAAGTGATTGTTTTTCCGGTCAACGTCTTGACAAAAATCTGCAT 8254
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
|| || ||||||||||| ||||| || || |||||||| || | ||| | |||| ||
Sbjct 8274 ACCAAGTGAAGGGTAGACTCTTTCTGGATGTTGTAATCAGCTAGAGTACGACCATCTTCA 8333
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
| || || |||||||| || | | ||| || || || || || ||||||||||||||
Sbjct 8334 AGCTGTTTTCCTGCAAAGATAAGCCTCTGCTGGTCCGGTGGGATTCCTTCTTTATCTTGG 8393
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
|| || || || | || | || || || |||| || || | ||| | |||||
Sbjct 8394 ATCTTAGCCTTGACGTTGTCAATGGTATCCGAGCTTTCAACCTCCAAAGTAATGGTTTTC 8453
Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || |||||||| ||||| ||||||||
Sbjct 8454 CCTGTCAAAGTTTTCACAAAAATCTGCAT 8482
>seq1845
Length=6980
Score = 98.7 bits (108), Expect = 8e-16
Identities = 148/209 (71%), Gaps = 1/209 (0%)
Strand=Plus/Plus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
|| ||||| || ||||| || || || || |||||||| || | || | |||| ||
Sbjct 3538 ACCAAATGGAGAGTAGACTCCTTCTGGATGTTGTAATCAGCAAGGGTACGCCCATCCTC- 3596
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
| ||||| |||||||| ||||| | ||| || || || || || || || |||||||||
Sbjct 3597 AGCTGCTTTCCTGCAAAGATCAACCTCTGCTGGTCTGGTGGGATCCCCTCCTTATCTTGA 3656
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
||||| || || | || | |||||||| | || || || | ||| | || ||
Sbjct 3657 ATTTTAGCCTTGACGTTGTCAATGGTGTCAGAGCTCTCAACCTCCAAAGTAATTGTCTTT 3716
Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || ||||| || || || ||||||||
Sbjct 3717 CCAGTCAAAGTCTTGACGAAGATCTGCAT 3745
>seq6710
Length=13574
Score = 87.8 bits (96), Expect = 1e-12
Identities = 103/137 (75%), Gaps = 2/137 (1%)
Strand=Plus/Minus
Query 101241 TTCCTCCTCTTAAACGTAA-AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCG 101299
||||||| || || | ||| ||| | |||||| || || || || || || ||||| ||
Sbjct 2922 TTCCTCCCCT-AAGCCTAAGAACCAGATGAAGCGTTGACTCCTTCTGGATGTTGTAGTCT 2864
Query 101300 GCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGC 101359
|| | ||||| |||| ||||| || || || ||||| ||||| | ||| || || ||
Sbjct 2863 GCAAGAGTTCGACCATCCTCCAACTGTTTCCCAGCAAAAATCAATCTCTGCTGGTCCGGA 2804
Query 101360 GGAATGCCTTCTTTATC 101376
|||||||||||||| ||
Sbjct 2803 GGAATGCCTTCTTTGTC 2787
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396181444916775
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |