Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Conyza_20canadensis_20[genbank_20GCA_5F000775935.1_202014-11-13]
20,075 sequences; 326,165,195 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq20014 545 3e-150
seq2978 475 4e-129
seq2990 365 5e-96
seq20016 345 5e-90
seq2982 118 1e-21
seq14484 105 8e-18
seq14483 105 8e-18
seq9747 105 8e-18
seq6291 105 8e-18
seq5065 105 8e-18
seq12569 102 9e-17
seq8649 93.3 5e-14
>seq20014
Length=5322
Score = 545 bits (604), Expect = 3e-150
Identities = 715/985 (73%), Gaps = 4/985 (0%)
Strand=Plus/Plus
Query 124049 GCTAGGTCTAGTGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCCAAGTTT 124108
|||| |||||| ||||| ||||| ||||| | ||||||||||||||||||||| | |||
Sbjct 938 GCTAAGTCTAGAGGGAAATTGTGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 997
Query 124109 GCTCTGTTTAGAACATCACCCCATGTTGGGACGATTTTTCCGTTAGCATCAACAACTGAT 124168
|| | ||| | | |||| |||| || | | || | | |||||| ||||||
Sbjct 998 GCACGGTTAATGATATCAGCCCAAGTGTTAATTACACGGCCTTGACTATCAACTACTGAT 1057
Query 124169 TGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGATACCCATAGAGGTTAAC 124228
||||| || ||||||||||| | |||||| ||||| |||| |||||| | || || |||
Sbjct 1058 TGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTGATACCTAAAGCAGTGAAC 1117
Query 124229 CATACACATACAACAGGGAAAACTGCTAGGAAGAAGTGAAGACTTCTTGAGTTGTTGAAT 124288
|| | || ||| ||||| || | ||||||||||| || | | | |||||||||||
Sbjct 1118 CAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAGAGTTGTTGAAA 1177
Query 124289 GAAGCATACTGGAAGATAAGACGACCAAAGTAACCGTGTGCTGCTACTATGTTGTATGTT 124348
|||||| |||||||| | || ||||| |||||||| || ||||| || || || |||
Sbjct 1178 CTAGCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCGGCTACGATATTATAAGTT 1237
Query 124349 TCTTCTTCTTGTCCGAACTTATAACCATAGTTCTGTGACTCTTGCTCTGTTGTTTCTCTG 124408
||||||||||| ||||| | ||||| | ||| || || | ||||| ||||| |||
Sbjct 1238 TCTTCTTCTTGACCGAATCTGTAACCTTCGTTAGCAGATTCATTTTCTGTGGTTTCCCTG 1297
Query 124409 ATTAGAGAAGATGTAACAAGAGAACCATGCATTGCTGAGAATAAAGATCCTCCGAACATT 124468
|| | | ||| || || | |||||||||||| || |||| || || ||||| |
Sbjct 1298 ATCAAACTAGAGGTTACCAAAGAACCATGCATAGCACTAAATAGGGAGCCGCCGAATACA 1357
Query 124469 CCTGCTACTCCTGCCATGTGGAAAGGATGCATTAGAATGTTATGCTCTGCTTGGAAAACG 124528
|| ||||| ||| |||||| || || ||||| || ||||| ||||| || ||||| ||
Sbjct 1358 CCAGCTACGCCTAGCATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACA 1417
Query 124529 AACATAAAGTTGAAAGTACCTGAGATACCAAGTGGCATACCATCAGAGAATGAACCCTGA 124588
| ||| |||||||||||||| || || || || |||||||||||||| || || |||
Sbjct 1418 ATCATGAAGTTGAAAGTACCAGAAATTCCTAGAGGCATACCATCAGAAAAGCTTCCTTGA 1477
Query 124589 CCAAATGGGTATACTAAGAATACAGCGAATGCAGCAGATACTGGTGCTGAATAAGCAACA 124648
|||| |||||| | ||||| ||||| ||||| | || || |||||||| ||||||
Sbjct 1478 CCAATTGGGTAGATCAAGAAAACAGCAGTCGCAGCTGCAACAGGAGCTGAATATGCAACA 1537
Query 124649 CAGATCCAAGGACGCATTCCTAATCTGTATGATAGTTCCCACTGTCTTCCCATGTATGCT 124708
|||||||| ||||| || | | | | |||||||||| | ||||||||
Sbjct 1538 GCAATCCAAGGTCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATGTAACAA 1597
Query 124709 GAAATACCAATAAGGAAGTGGAAAATTACCAACTGATAAGGACCACCATTATACAACCAT 124768
| | ||||| | |||||| | || | | | ||||||||||||||| || ||||||
Sbjct 1598 GCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCATTGTATAACCAT 1657
Query 124769 TCATCAACAGTTGCTGCTTCCCAGATTGGGTAGAAGTGTAGTCCGATAGCGTTTGATGAT 124828
|||||||||| |||||||||||| |||||||| || || | || ||||| || |
Sbjct 1658 TCATCAACAGATGCTGCTTCCCATATTGGGTAAAAATGCAAACCTATAGCTGCAGAAGTA 1717
Query 124829 GGAACAACTGCACCAGAGATGATGTTGTTACCATATAAGAAAGAACCCGCTACTGGTTCT 124888
|||| || ||||| || || || ||||| ||||| | | ||| || | || |||||
Sbjct 1718 GGAATAATGGCACCCGAAATAATATTGTTTCCATAAAGTAGAGATCCAGAAACAGGTTCA 1777
Query 124889 CTGATTCCGTCGATATCGACAGGAGGTGCTGCAATAAATGCAACGATGAA-ACATGCTGC 124947
| || || || ||||| || ||||| || ||||| || || | || || ||| | |
Sbjct 1778 CGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAGGCGATAATAAATACA-GAAGT 1836
Query 124948 TGCTGTGAGTAAGCATGGAATCATTAGAACACCAAACCAACCAACATAAATTCTGTTGTT 125007
||| || | |||| || ||||| | ||| |||||||| |||| |||| | ||| ||
Sbjct 1837 TGCGGTCAATAAGGTAGGGATCATCAAAACGCCAAACCATCCAATGTAAAGACGGTT-TT 1895
Query 125008 TGTTGAT-GTTACCCACTCACAGAA 125031
| || | |||| ||| | ||||||
Sbjct 1896 CGGTGCTGGTTATCCAGTTACAGAA 1920
>seq2978
Length=1535
Score = 475 bits (526), Expect = 4e-129
Identities = 606/828 (73%), Gaps = 5/828 (1%)
Strand=Plus/Minus
Query 124049 GCTAGGTCTAGTGGGAAGTTGTGTGCATTTCTTTCAT-GCATAACTTCCATACCCAAGTT 124107
|||| |||||| ||||| ||||| ||||| | ||||| |||||||||||||||| | |||
Sbjct 911 GCTAAGTCTAGAGGGAAATTGTGAGCATTACGTTCATTGCATAACTTCCATACCAAGGTT 852
Query 124108 TGCTCTGTTTAGAACATCACCCCATGTTGGGACGATTTTTCCGTTAGCATCAACAACTGA 124167
|| | ||| | | |||| |||| || | | || | | |||||| |||||
Sbjct 851 AGCACGGTTAATGATATCAGCCCAAGTGTTAATTACACGGCCTTGACTATCAACTACTGA 792
Query 124168 TTGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGATACCCATAGAGGTTAA 124227
|||||| || ||||||||||| | |||||| ||||| |||| |||||| | || || ||
Sbjct 791 TTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTGATACCTAAAGCAGTGAA 732
Query 124228 CCATACACATACAACAGGGAAAACTGCTAGGAAGAAGTGAAGACTTCTTGAGTTGTTGAA 124287
||| | || ||| ||||| || | ||||||||||| || | | | |||||||||||
Sbjct 731 CCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAGAGTTGTTGAA 672
Query 124288 TGAAGCATACTGGAAGATAAGACGACCAAAGTAACCGTGTGCTGCTACTATGTTGTATGT 124347
|||||| |||||||| | || ||||| |||||||| || ||||| || || || ||
Sbjct 671 ACTAGCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCGGCTACGATATTATAAGT 612
Query 124348 TTCTTCTTCTTGTCCGAACTTATAACCATAGTTCTGTGACTCTTGCTCTGTTGTTTCTCT 124407
|||||||||||| ||||| | ||||| | ||| || || | ||||| ||||| ||
Sbjct 611 TTCTTCTTCTTGACCGAATCTGTAACCTTCGTTAGCAGATTCATTTTCTGTGGTTTCCCT 552
Query 124408 GATTAGAGAAGATGTAACAAGAGAACCATGCATTGCTGAGAATAAAGATCCTCCGAACAT 124467
||| | | ||| || || | |||||||||||| || |||| || || ||||| |
Sbjct 551 GATCAAACTAGAGGTTACCAAAGAACCATGCATAGCACTAAATAGGGAGCCGCCGAATAC 492
Query 124468 TCCTGCTACTCCTGCCATGTGGAAAGGATGCATTAGAATGTTATGCTCTGCTTGGAAAAC 124527
|| ||||| ||| |||||| || || ||||| || ||||| ||||| || ||||| ||
Sbjct 491 ACCAGCTACGCCTAGCATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATAC 432
Query 124528 GAACATAAAGTTGAAAGTACCTGAGATACCAAGTGGCATACCATCAGAGAATGAACCCTG 124587
| ||| |||||||||||||| || || || || |||||||||||||| || || ||
Sbjct 431 AATCATGAAGTTGAAAGTACCAGAAATTCCTAGAGGCATACCATCAGAAAAGCTTCCTTG 372
Query 124588 ACCAAATGGGTATACTAAGAATACAGCGAATGCAGCAGATACTGGTGCTGAATAAGCAAC 124647
||||| |||||| | ||||| ||||| ||||| | || || |||||||| |||||
Sbjct 371 ACCAATTGGGTAGATCAAGAAAACAGCAGTCGCAGCTGCAACAGGAGCTGAATATGCAAC 312
Query 124648 ACAGATCCAAGGACGCATTCCTAATCTGTATGATAGTTCCCACTGTCTTCCCATGTATGC 124707
| |||||||| ||||| || | | | | |||||||||| | ||||||||
Sbjct 311 AGCAATCCAAGGTCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATGTAACA 252
Query 124708 TGAAATACCAATAAGGAAGTGGAAAATTACCAACTGATAAGGACCACC-ATTATACAACC 124766
| | ||||| | |||||| | || | | | |||||||||||| ||| || ||||
Sbjct 251 AGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCTATTGTATAACC 192
Query 124767 ATTCA-TCAACAGTTGCTG-CTTCCCAGATTGGGTAGAAGTGTAGTCCGATAGCGTTTGA 124824
||||| ||||||| ||||| ||||||| |||||||| || || | || ||||| ||
Sbjct 191 ATTCATTCAACAGATGCTGCCTTCCCATATTGGGTAAAAATGCAAACCTATAGCTGCAGA 132
Query 124825 TGATGGAACAACTGCACCAGAGATGATGTTGTTACCATATAAGAAAGA 124872
| |||| || ||||| || || || ||||| ||||| ||| ||||
Sbjct 131 AGTAGGAATAATGGCACCCGAAATAATATTGTT-CCATAAAAGTAAGA 85
>seq2990
Length=15620
Score = 365 bits (404), Expect = 5e-96
Identities = 525/731 (72%), Gaps = 7/731 (1%)
Strand=Plus/Minus
Query 124306 AAGACGACCAAAGTAA-CCGT-GTGCTGCTACTATGTTGTATGTTTCTTCTTCTTGTCCG 124363
|| ||| ||||| ||| |||| | || ||||| || || || |||||||||||||| |||
Sbjct 15558 AATACGGCCAAAATAAACCGTAGAGCGGCTACGATATTATAAGTTTCTTCTTCTTGACCG 15499
Query 124364 AACTTATAACCATAGTTCTGTGACTCTTGCTCTGTTGTTTCTCTGATTAGAGAAGATGTA 124423
|| | ||||| | ||| || || | ||||| ||||| ||||| | | ||| ||
Sbjct 15498 AATCTGTAACCTTCGTTAGCAGATTCATTTTCTGTGGTTTCCCTGATCAAACTAGAGGTT 15439
Query 124424 ACAAGAGAACCATGCATTGCTGAGAATAAAGATCCTCCGAACATTCCTGCTACTCCTGCC 124483
|| | |||||||||||| || |||| || || ||||| | || ||||| ||| |
Sbjct 15438 ACCAAAGAACCATGCATAGCACTAAATAGGGAGCCGCCGAATACACCAGCTACGCCTAGC 15379
Query 124484 ATGTGGAAAGGATGCATTAGAATGTTATGCTCTGCTTGGAAAACGAACATAAAGTTGAAA 124543
||||| || || ||||| || ||||| ||||| || ||||| || | ||| |||||||||
Sbjct 15378 ATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACAATCATGAAGTTGAAA 15319
Query 124544 GTACCTGAGATACCAAGTGGCATACCATCAGAGAATGAACCCTGACCAAATGGGTATACT 124603
||||| || || || || |||||||||||||| || || ||||||| |||||| |
Sbjct 15318 GTACCAGAAATTCCTAGAGGCATACCATCAGAAAAGCTTCCTTGACCAATTGGGTAGATC 15259
Query 124604 AAGAATACAGCGAATGCAGCAGATACTGGTGCTGAATAAGCAACACAGATCCAAGGACGC 124663
||||| ||||| ||||| | || || |||||||| |||||| |||||||| |||
Sbjct 15258 AAGAAAACAGCAGTCGCAGCTGCAACAGGAGCTGAATATGCAACAGCAATCCAAGGTCGC 15199
Query 124664 ATTCCTAATCTGTATGATAGTT-CCCACTGTCTTCCCATGTATGCTGAAATACCAATAAG 124722
|| || | | | | |||| |||||| | |||||||| | | ||||| |
Sbjct 15198 ATACCCAGACGGAAACTAAGTTCCCCACTCACGACCCATGTAACAAGCTACACCAAGTAA 15139
Query 124723 GAAGTGGAAAATTACCAACTGATAAGGACCACCATTATACAACCATTCATCAACAGTTGC 124782
|||||| | || | | | ||||||||||||||| || |||||||||||||||| |||
Sbjct 15138 GAAGTGTAGAACAATTAGTTCATAAGGACCACCATTGTATAACCATTCATCAACAGATGC 15079
Query 124783 TGCTTCCCAGATTGGGTAGAAGTGTAGTCCGATAGCGTTTGATGATGGAACAACTGCACC 124842
||||||||| |||||||| || || | || ||||| || | |||| || |||||
Sbjct 15078 TGCTTCCCATATTGGGTAAAAATGCAAACCTATAGCTGCAGAAGTAGGAATAATGGCACC 15019
Query 124843 AGAGATGATGTTGTTACCATATAAGAAAGAACCCGCTACTGGTTCTCTGATTCCGTCGAT 124902
|| || || ||||| ||||| | | ||| || | || ||||| | || || || ||
Sbjct 15018 CGAAATAATATTGTTTCCATAAAGTAGAGATCCAGAAACAGGTTCACGAATACCATCAAT 14959
Query 124903 ATCGACAGGAGGTGCTGCAATAAATGCAACGATGAA-ACATGCTGCTGCTGTGAGTAAGC 124961
||| || ||||| || ||||| || || | || || ||| | | ||| || | ||||
Sbjct 14958 ATCTACTGGAGGAGCAGCAATGAAGGCGATAATAAATACA-GAAGTTGCGGTCAATAAGG 14900
Query 124962 ATGGAATCATTAGAACACCAAACCAACCAACATAAATTCTGTTGTTTGTTGAT-GTTACC 125020
|| ||||| | ||| |||||||| |||| |||| | ||| || | || | |||| |
Sbjct 14899 TAGGGATCATCAAAACGCCAAACCATCCAATGTAAAGACGGTT-TTCGGTGCTGGTTATC 14841
Query 125021 CACTCACAGAA 125031
|| | ||||||
Sbjct 14840 CAGTTACAGAA 14830
>seq20016
Length=17894
Score = 345 bits (382), Expect = 5e-90
Identities = 703/1043 (67%), Gaps = 22/1043 (2%)
Strand=Plus/Minus
Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925
|||||| ||||| || | |||| || || || ||||||| || || ||||| || ||
Sbjct 14784 TTAAAGAGCGTTTCCACGGGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTG 14725
Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985
|| || | |||||| || | || ||||| || | ||||| || || || |||||
Sbjct 14724 ATCTTGAGCCGCCATCCAAGCACGAATACCTTCGTTTAATAGAATATTTTTGGTGTAGAA 14665
Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045
|||||| || || || ||||| || || | || || ||||| || ||||| || || |
Sbjct 14664 AGTCTCAAATTCAGGATCTTCCGCCGCGCGAATTTCCTGAGAAACGAAGTCATAGGCACG 14605
Query 123046 GAGGTTAAGTGCTAGACCTACGATACCTATAGATGATGTCCACATACCCATGACAGGAAC 123105
||||| | || | ||| || | || | || |||| | ||| | || || ||
Sbjct 14604 TAGGTTCAAGGCCAAACCGACTACTCCAAGAGCACTCATCCATAAACCAGTTACCGGTAC 14545
Query 123106 GAACAACATAAGGAAGTGTAAGAATCTTTTGTTAGAAAATGCGATACCAAATATCTGTGA 123165
|| ||||||| ||| ||||| | | ||| || ||||| || | ||||| || || ||
Sbjct 14544 AAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGGGA 14485
Query 123166 CCAGAATCTGTTCGCTGTAATCATACTATAAGTTTCTTCTTCCTGTGTAGGATCGAATGC 123225
||| || | || || || | ||| |||||||||||| | || || || | || ||
Sbjct 14484 CCAAAAGCGATTAGCGGTGACCATTGAATAAGTTTCTTCAGCTTGAGTTGGGTTAAAAGC 14425
Query 123226 TCTGAAAGTTGTAGATTGAATCTTACCTTCAGTATATTGTGATGTGTCTTCATACAATGT 123285
| ||| |||| ||| || ||| || ||||| | || ||
Sbjct 14424 ACGGAA---TGTAT-TTGCG-----CCATCACCAT------------CTTCAAATAAAGT 14386
Query 123286 GTTCTGCACTGTTGCACCATGAATGGCACATAGTAATGCTCCACCTAGTATTCCTGCAAC 123345
|| | || || ||||||||||| || ||||| || || | || | || || |||||
Sbjct 14385 ATTTTCTACAGTAGCACCATGAATAGCGCATAGCAAAGCAGCGCCCAATACACCAGCAAC 14326
Query 123346 ACCCATCATGTGAAATGGA-TTCAATGTAATGTTGTGGAAACCTTGTATGAATAAGATAT 123404
|||||||| |||||||| |||||||| ||| || || ||||| | || | ||||
Sbjct 14325 TCCCATCATATGAAATGGGGTTCAATGTCCAGTTATGAAATCCTTGAAAAAAGAGGATAA 14266
Query 123405 AACGAAAGATTGCTGCGACACCGAATGATGGTGCGAAGAACCAACTGTGCTGACCTAGTG 123464
| ||||| || ||||| ||||| || || || |||||||||| |||||||||||
Sbjct 14265 ATCGAAATATAGCTGCTACACCAAAACTAGGCGCAAAGAACCAACCAGACTGACCTAGTG 14206
Query 123465 GATAGATCAGAAAGATGCTAGTGAAGACTGCGATAACAGCAGAGAATGCGAGTGCGTTGT 123524
|||| ||||| || | | || || || || | |||||||||||| ||| || |
Sbjct 14205 GATAAATCAGGAATACAGAAACAAAAACGGCAATTGGACCAGAGAATGCGATTGCATTAT 14146
Query 123525 AAGGTCTAATGCCTACAAGTCCTGCGATCTCAAATTGTCTGAGCATGAAACCTATGAGTC 123584
|||| | | ||| || || | || ||||| | | |||||||||||| ||||
Sbjct 14145 AAGGGCGCAATTGAACAGATCGAGCAAGTTCGAATTGACGTAACATGAAACCTATTAGTC 14086
Query 123585 CAAAGACTCCATGTAATGCTACAAAGTTCCATAGACCTCCGAGTTGTAACCAACGAACGA 123644
| || | || || | || ||||| |||| ||||| || | ||| |||||||| |
Sbjct 14085 CGAAAGCACCGTGGAGAGCAACAAAAGTCCACAGACCGCCTAATTGACACCAACGAGTAA 14026
Query 123645 ATGATCCTTGTGCTTCAGGTCCCCAAAGGAACATGAGACTATGACCCATTGCGTCACCAG 123704
| ||||||||||||||| ||||| || || | | | ||| | | | | |||
Sbjct 14025 AATCTCCTTGTGCTTCAGGACCCCATAGTAATAATAAAGAATGTGCTAAACTATTAGCAG 13966
Query 123705 GTGTGGAGACTGCTGCTGTTAAGAAGTTTGCTCCCTCAAGATATGAAGATGCAATACCAT 123764
| || || || || || |||||||| || || || | ||| ||| || | ||||
Sbjct 13965 GAGTAGAAACCGCAGCAGTTAAGAAATTGCAGCCTTCCAAATAGGAACTGGCCAATCCAT 13906
Query 123765 GTGTATACCATGATGTAACGAAGGTAGTTCCTAAGAACCAACCACCGATTGATAGATACG 123824
| ||||||||||| || || ||||| || || ||||||||| || | | | ||| |
Sbjct 13905 GGGTATACCATGAAGTTACAAAGGTTGTACCCGTGAACCAACCCCCTACAGCGAAATAGG 13846
Query 123825 CACAAGGCAGAAGTAAAAGACCAGACCATCCTATGAATACAAAACGATCTCTCTTTAACC 123884
||||||| | || || | || ||||| |||| || || ||||| || || |||||
Sbjct 13845 CACAAGGAAAGAGCAATAAGCCGGACCAGCCTACAAAAACGAAACGGTCCCTACGTAACC 13786
Query 123885 AGTCGTCAAGAACATCAAACCAA 123907
|||| || | || ||||||| ||
Sbjct 13785 AGTCATCCATAATATCAAACAAA 13763
>seq2982
Length=1363
Score = 118 bits (130), Expect = 1e-21
Identities = 234/341 (69%), Gaps = 4/341 (1%)
Strand=Plus/Plus
Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925
|||||| ||||| || | |||| || || || ||||||| || || ||||| || ||
Sbjct 968 TTAAAGAGCGTTTCCACGGGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTG 1027
Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985
|| || | |||||| || | || ||||| || | ||||| || || || |||||
Sbjct 1028 ATCTTGAGCCGCCATCCAAGCACGAATACCTTCGTTTAATAGAATATTTTTGGTGTAGAA 1087
Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045
|||||| || || || ||||| || || | || || ||||| || ||||| || || |
Sbjct 1088 AGTCTCAAATTCAGGATCTTCCGCCGCGCGAATTTCCTGAGAAACGAAGTCATAGGCACG 1147
Query 123046 GAGGTTAAGTGCTAGACCTACGATACCTATAGATGATGTCCACATACCCATGACAGGAAC 123105
||||| | || | ||| || | || | || |||| | ||| | || || ||
Sbjct 1148 TAGGTTCAAGGCCAAACCGACTACTCCAAGAGCACTCATCCATAAACCAGTTACCGGTAC 1207
Query 123106 GAACAACATAAGGAAGTGTAAGAATCTTTTGTTAGAAAATGCGATACCAAATATCTGTGA 123165
|| ||||||| ||| ||||| | | ||| |||| ||| || | ||||| || || ||
Sbjct 1208 AAATAACATAAAGAAATGTAACCAACGTTTATTAGGAAAAGCAACCCCAAAGAT-TG-GA 1265
Query 123166 CCAGAATCTGTTCGCTGTA-ATCA-TACTATAAGTTTCTTC 123204
||| | | || || ||| | || || ||||||||||||
Sbjct 1266 CCAAAGACGATTAGCGGTAGACCATTAGAATAAGTTTCTTC 1306
>seq14484
Length=24297
Score = 105 bits (116), Expect = 8e-18
Identities = 169/241 (70%), Gaps = 4/241 (2%)
Strand=Plus/Plus
Query 139317 TGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGT 139376
|| |||||||| || || || || ||||| || || |||||||| ||||| || || ||
Sbjct 14678 TGAGCTGTGCAAATATTGCTAGTAGCTTTATCCCTCCTAATATGTTGCTCCCTCGTCTGC 14737
Query 139377 AGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTC--CACTGACTGACCTACAATTCTGC 139434
| || | | | ||||| || || | || |||| || ||| | |||||| |
Sbjct 14738 ATAGCCATACGTAAAGCAGGCTTACCGGCAGAATCAACACTAAC--ACCAATAATTCTTC 14795
Query 139435 CAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGT 139494
|||| ||| | |||||||||| | | ||||||| || || ||||||||||| || |
Sbjct 14796 CAGGCATCATCCTCTTATACTCTTGAGAGGTTGCAAGAAACGCGGCATGAGGACCACCAT 14855
Query 139495 ATCCCATAGGAATACCAAACCTTTGCATACTACCTACAGCAATATCAAATCCCCACTCAC 139554
| ||||| |||| |||||| ||||| ||| | ||||||||| ||| | ||||
Sbjct 14856 ACCCCATTGGAACACCAAATCTTTGAGCCGAACCAATCACAATATCAACTCCAAATTCAC 14915
Query 139555 C 139555
|
Sbjct 14916 C 14916
>seq14483
Length=21410
Score = 105 bits (116), Expect = 8e-18
Identities = 169/241 (70%), Gaps = 4/241 (2%)
Strand=Plus/Minus
Query 139317 TGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGT 139376
|| |||||||| || || || || ||||| || || |||||||| ||||| || || ||
Sbjct 8599 TGAGCTGTGCAAATATTGCTAGTAGCTTTATCCCTCCTAATATGTTGCTCCCTCGTCTGC 8540
Query 139377 AGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTC--CACTGACTGACCTACAATTCTGC 139434
| || | | | ||||| || || | || |||| || ||| | |||||| |
Sbjct 8539 ATAGCCATACGTAAAGCAGGCTTACCGGCAGAATCAACACTAAC--ACCAATAATTCTTC 8482
Query 139435 CAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGT 139494
|||| ||| | |||||||||| | | ||||||| || || ||||||||||| || |
Sbjct 8481 CAGGCATCATCCTCTTATACTCTTGAGAGGTTGCAAGAAACGCGGCATGAGGACCACCAT 8422
Query 139495 ATCCCATAGGAATACCAAACCTTTGCATACTACCTACAGCAATATCAAATCCCCACTCAC 139554
| ||||| |||| |||||| ||||| ||| | ||||||||| ||| | ||||
Sbjct 8421 ACCCCATTGGAACACCAAATCTTTGAGCCGAACCAATCACAATATCAACTCCAAATTCAC 8362
Query 139555 C 139555
|
Sbjct 8361 C 8361
>seq9747
Length=24725
Score = 105 bits (116), Expect = 8e-18
Identities = 169/241 (70%), Gaps = 4/241 (2%)
Strand=Plus/Minus
Query 139317 TGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGT 139376
|| |||||||| ||||| |||||||||||||| ||||| || || ||||| | || ||
Sbjct 10576 TGAGCTGTGCAAATGTTGCTGGTTGCTTTGTCCCTTCTGATGTGTTGCTCGCGGGTCTGC 10517
Query 139377 AGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTC--CACTGACTGACCTACAATTCTGC 139434
| || | | | ||||| ||||| || |||| || ||| | ||||| |
Sbjct 10516 ATAGCCATACGTAAAGCAGGTTTGCCAGAAGAATCGACACTAAC--ACCAATGATTCTTC 10459
Query 139435 CAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGT 139494
|||| ||| ||||||| || | | || |||||||| || || ||||||||||| || |
Sbjct 10458 CAGGCATCATTCTCTTGTATTCTTGTGATGTTGCAAGAAAAGCTGCATGAGGACCCCCAT 10399
Query 139495 ATCCCATAGGAATACCAAACCTTTGCATACTACCTACAGCAATATCAAATCCCCACTCAC 139554
| ||||| |||| ||||| | ||| ||| || | |||||| ||| ||||||
Sbjct 10398 ACCCCATTGGAACCCCAAATCGTTGAGCCGAACCAACCACGATATCAGCTCCAAACTCAC 10339
Query 139555 C 139555
|
Sbjct 10338 C 10338
Score = 86.0 bits (94), Expect = 7e-12
Identities = 71/87 (82%), Gaps = 0/87 (0%)
Strand=Plus/Minus
Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242
|||||||| ||||| | |||||||| || || ||||||||||| || |||||||| ||
Sbjct 13103 ACACCAATTGGACCCATTCCAGGACCACCTCCACCATGTGGAATGCAAAATGTCTTGTGC 13044
Query 138243 AAATTTAGATGACATACATCTGCACCA 138269
| |||||||| || ||||| ||||||
Sbjct 13043 AGGTTTAGATGGCAAACATCGGCACCA 13017
>seq6291
Length=23639
Score = 105 bits (116), Expect = 8e-18
Identities = 169/241 (70%), Gaps = 4/241 (2%)
Strand=Plus/Plus
Query 139317 TGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGT 139376
|| |||||||| ||||| |||||||||||||| ||||| || || ||||| | || ||
Sbjct 23203 TGAGCTGTGCAAATGTTGCTGGTTGCTTTGTCCCTTCTGATGTGTTGCTCGCGGGTCTGC 23262
Query 139377 AGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTC--CACTGACTGACCTACAATTCTGC 139434
| || | | | ||||| ||||| || |||| || ||| | ||||| |
Sbjct 23263 ATAGCCATACGTAAAGCAGGTTTGCCAGAAGAATCGACACTAAC--ACCAATGATTCTTC 23320
Query 139435 CAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGT 139494
|||| ||| ||||||| || | | || |||||||| || || ||||||||||| || |
Sbjct 23321 CAGGCATCATTCTCTTGTATTCTTGTGATGTTGCAAGAAAAGCTGCATGAGGACCCCCAT 23380
Query 139495 ATCCCATAGGAATACCAAACCTTTGCATACTACCTACAGCAATATCAAATCCCCACTCAC 139554
| ||||| |||| ||||| | ||| ||| || | |||||| ||| ||||||
Sbjct 23381 ACCCCATTGGAACCCCAAATCGTTGAGCCGAACCAACCACGATATCAGCTCCAAACTCAC 23440
Query 139555 C 139555
|
Sbjct 23441 C 23441
Score = 86.0 bits (94), Expect = 7e-12
Identities = 71/87 (82%), Gaps = 0/87 (0%)
Strand=Plus/Plus
Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242
|||||||| ||||| | |||||||| || || ||||||||||| || |||||||| ||
Sbjct 20666 ACACCAATTGGACCCATTCCAGGACCACCTCCACCATGTGGAATGCAAAATGTCTTGTGC 20725
Query 138243 AAATTTAGATGACATACATCTGCACCA 138269
| |||||||| || ||||| ||||||
Sbjct 20726 AGGTTTAGATGGCAAACATCGGCACCA 20752
>seq5065
Length=33565
Score = 105 bits (116), Expect = 8e-18
Identities = 169/241 (70%), Gaps = 4/241 (2%)
Strand=Plus/Minus
Query 139317 TGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGT 139376
|| |||||||| || || || || ||||| || || |||||||| ||||| || || ||
Sbjct 4491 TGAGCTGTGCAAATATTGCTAGTAGCTTTATCCCTCCTAATATGTTGCTCCCTCGTCTGC 4432
Query 139377 AGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTC--CACTGACTGACCTACAATTCTGC 139434
| || | | | ||||| || || | || |||| || ||| | |||||| |
Sbjct 4431 ATAGCCATACGTAAAGCAGGCTTACCGGCAGAATCAACACTAAC--ACCAATAATTCTTC 4374
Query 139435 CAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGT 139494
|||| ||| | |||||||||| | | ||||||| || || ||||||||||| || |
Sbjct 4373 CAGGCATCATCCTCTTATACTCTTGAGAGGTTGCAAGAAACGCGGCATGAGGACCACCAT 4314
Query 139495 ATCCCATAGGAATACCAAACCTTTGCATACTACCTACAGCAATATCAAATCCCCACTCAC 139554
| ||||| |||| |||||| ||||| ||| | ||||||||| ||| | ||||
Sbjct 4313 ACCCCATTGGAACACCAAATCTTTGAGCCGAACCAATCACAATATCAACTCCAAATTCAC 4254
Query 139555 C 139555
|
Sbjct 4253 C 4253
>seq12569
Length=659
Score = 102 bits (112), Expect = 9e-17
Identities = 194/282 (69%), Gaps = 3/282 (1%)
Strand=Plus/Minus
Query 123628 TTGTA-ACCAACGAACGAATGATCCTTGTGCTTCAGGTCCCCAA-AGGAACATGAGACTA 123685
||||| |||||||| || ||||||||||||||| ||||| || || | | | |
Sbjct 659 TTGTACACCAACGAGTAAAAT-TCCTTGTGCTTCAGGACCCCACTAGTAATAATAAAGAA 601
Query 123686 TGACCCATTGCGTCACCAGGTGTGGAGACTGCTGCTGTTAAGAAGTTTGCTCCCTCAAGA 123745
|| | | | | |||| || || || || || |||||||| || || || | |
Sbjct 600 TGTGCTAAACTATTAGCAGGAGTAGAAACCGCAGCAGTTAAGAAATTGCAGCCTTCCAAA 541
Query 123746 TATGAAGATGCAATACCATGTGTATACCATGATGTAACGAAGGTAGTTCCTAAGAACCAA 123805
|| ||| || | ||||| ||||||||||| || || ||||| || || |||||||
Sbjct 540 TAGGAACTGGCCAATCCATGGGTATACCATGAAGTTACAAAGGTTGTACCCGTGAACCAA 481
Query 123806 CCACCGATTGATAGATACGCACAAGGCAGAAGTAAAAGACCAGACCATCCTATGAATACA 123865
|| || | | | ||| |||||||| | || || | || ||||| |||| || ||
Sbjct 480 CCCCCTACAGCGAAATAGGCACAAGGAAAGAGCAATAAGCCGGACCAGCCTACAAAAACG 421
Query 123866 AAACGATCTCTCTTTAACCAGTCGTCAAGAACATCAAACCAA 123907
||||| || || ||||||||| || | || ||||||| ||
Sbjct 420 AAACGGTCCCTACGTAACCAGTCATCCATAATATCAAACAAA 379
>seq8649
Length=8497
Score = 93.3 bits (102), Expect = 5e-14
Identities = 132/186 (71%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925
|||||| ||||| || | |||| || || || ||||||| || || ||||| || ||
Sbjct 8183 TTAAAGAGCGTTTCCACGGGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTG 8242
Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985
|| || | |||||| || | || ||||| || | ||||| || || || |||||
Sbjct 8243 ATCTTGAGCCGCCATCCAAGCACGAATACCTTCGTTTAATAGAATATTTTTGGTGTAGAA 8302
Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045
|||||| || || || ||||| || || | || || ||||| || ||||| || || |
Sbjct 8303 AGTCTCAAATTCAGGATCTTCCGCCGCGCGAATTTCCTGAGAAACGAAGTCATAGGCACG 8362
Query 123046 GAGGTT 123051
|||||
Sbjct 8363 TAGGTT 8368
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578853107589000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |