Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conyza_20canadensis_20[genbank_20GCA_5F000775935.1_202014-11-13] 20,075 sequences; 326,165,195 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq13411 129 1e-24 seq5340 129 1e-24 seq16550 125 1e-23 seq8889 123 5e-23 seq8384 122 2e-22 seq7910 122 2e-22 seq945 120 6e-22 seq5280 118 2e-21 seq10926 116 7e-21 seq4675 105 1e-17 seq16006 98.7 2e-15 seq14670 91.5 3e-13 seq6802 91.5 3e-13 seq6637 91.5 3e-13 seq4586 84.2 4e-11 >seq13411 Length=19963 Score = 129 bits (142), Expect = 1e-24 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 192321 ACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTC 192380 |||||| || ||||| | ||| | ||||| |||||| || || | |||||| | | Sbjct 11477 ACGTAAGACCAAATGAAGAGTGGATTCTTTTTGGATATTGTAGTCGGCTAATGTCCTGCC 11418 Query 192381 ATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTT 192440 || || | |||||| || ||||||||||| | ||||| || ||||| || |||||||| Sbjct 11417 GTCTTCAAGTTGTTTGCCTGCAAAGATTAAACGTTGTTGGTCTGGTGGGATGCCTTCTTT 11358 Query 192441 ATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAAT 192500 ||||| || || ||| ||||| || | || || ||||| ||||||| || || Sbjct 11357 GTCTTGAATCTTGGCTTTCACATTGTCGATTGTGTCGGAGGATTCGACTTCTAAGGTTAT 11298 Query 192501 GGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 ||||| || ||||| ||||| | || ||||||||||| Sbjct 11297 TGTTTTGCCGGTTAAGGTTTTTACGAAGATCTGCATTTT 11259 >seq5340 Length=22833 Score = 129 bits (142), Expect = 1e-24 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 192321 ACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTC 192380 |||||| || ||||| | ||| | ||||| |||||| || || | |||||| | | Sbjct 14274 ACGTAAGACCAAATGAAGAGTGGATTCTTTTTGGATATTGTAGTCGGCTAATGTCCTGCC 14333 Query 192381 ATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTT 192440 || || | |||||| || ||||||||||| | ||||| || ||||| || |||||||| Sbjct 14334 GTCTTCAAGTTGTTTGCCTGCAAAGATTAAACGTTGTTGGTCTGGTGGGATGCCTTCTTT 14393 Query 192441 ATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAAT 192500 ||||| || || ||| ||||| || | || || ||||| ||||||| || || Sbjct 14394 GTCTTGAATCTTGGCTTTCACATTGTCGATTGTGTCGGAGGATTCGACTTCTAAGGTTAT 14453 Query 192501 GGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 ||||| || ||||| ||||| | || ||||||||||| Sbjct 14454 TGTTTTGCCGGTTAAGGTTTTTACGAAGATCTGCATTTT 14492 >seq16550 Length=20979 Score = 125 bits (138), Expect = 1e-23 Identities = 168/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365 |||||||| | |||||| | || ||||| | ||| | ||| ||| || || || ||||| Sbjct 17901 ATACCACCACGAAGACGAAGAACCAAATGCAGAGTCGACTCCTTTTGA-ATGTTGTAATC 17959 Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425 || | || || |||| || | || || ||||||||||| | |||||||| || || Sbjct 17960 AGCAAGGGTACGCCCATCCTCAAGCTGCTTTCCAGCAAAGATCAGCCTCTGTTGGTCTGG 18019 Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485 ||| || ||||| |||||||| || || || |||||| |||| ||| || ||| Sbjct 18020 TGGGATCCCTTCCTTATCTTGAATCTTTGCCTTGACATTATCAATAGTATCCGAGCTTTC 18079 Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || | ||| |||||||| || || || ||||| | ||| |||||||| Sbjct 18080 AACCTCCAAAGTGATGGTTTTCCCTGTCAAAGTTTTTACAAAAATCTGCAT 18130 Score = 116 bits (128), Expect = 7e-21 Identities = 135/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 || || ||||| | | ||| ||| |||| ||||||||||| || || || || || ||| Sbjct 17265 ATGTTGTAATCTGCAAGTGTGCGTCCATCTTCCAATTGTTTCCCTGCGAAAATCAACCTC 17324 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474 || || || ||||| || || || ||||| ||||| || || |||||| || | | Sbjct 17325 TGCTGGTCTGGTGGGATCCCCTCCTTATCCTGTATCTTGGCCTTGACATTATCAATCGTA 17384 Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534 ||||| || || || || | |||||||||||| ||||| || || || | ||| |||||| Sbjct 17385 TCTGAAGACTCCACCTCCAAAGTAATGGTTTTTCCAGTCAACGTCTTGACAAAGATCTGC 17444 Query 192535 AT 192536 || Sbjct 17445 AT 17446 Score = 100 bits (110), Expect = 6e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| || | || | ||| || || | |||| ||| || ||| || || || Sbjct 17445 ATCCCACCCCTCAACCGCAGTACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCT 17504 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | || || || |||| || | |||||| || |||||||| | || || || || ||| Sbjct 17505 GCCAAAGTACGCCCATCTTCGAGTTGTTTTCCTGCAAAGATAAGCCTTTGCTGGTCTGGT 17564 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || |||||||||||||| || || ||| || ||||| || | ||| || ||| Sbjct 17565 GGGATTCCTTCTTTATCCTGAATCTTAGCCTTGACATTGTCAATCGTATCAGAACTTTCA 17624 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || |||| ||| || ||||| || || || || || | ||| |||||||| Sbjct 17625 ACCTCTAAAGTGATTGTTTTTCCGGTCAACGTCTTGACAAAAATCTGCAT 17674 Score = 91.5 bits (100), Expect = 3e-13 Identities = 117/160 (73%), Gaps = 1/160 (1%) Strand=Plus/Plus Query 192380 CATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTT 192439 |||| || | || || ||||||||||| || || || ||||| || || || ||||||| Sbjct 18430 CATCCTCGAGCTGCTTTCCAGCAAAGATCAACCTTTGCTGATCTGGGGGGATACCTTCTT 18489 Query 192440 TATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAA 192499 | ||||| ||||| |||||||| |||| || || || ||||| ||||| | Sbjct 18490 TGTCTTGGATTTT-GGCCTTACATTATCGATAGTGTCAGAGCTCTCGACTTCGAGAGTGA 18548 Query 192500 TGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 |||| ||||| || | || |||| ||| |||||||| || Sbjct 18549 TGGTCTTACCCGTGAGAGTCTTAACAAAGATCTGCATATT 18588 >seq8889 Length=9065 Score = 123 bits (136), Expect = 5e-23 Identities = 165/228 (72%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369 ||||| | |||||| | || | || | |||| ||| || || || ||||||| Sbjct 2297 CCACCACGAAGACGGAGCACAAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCAGCA 2238 Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429 | ||| ||| |||| |||||||||||||| |||||||| | ||||| || || ||||| Sbjct 2237 AGTGTCCGTCCATCTTCCAATTGTTTACCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGG 2178 Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489 || || || ||||| || || || || ||||| |||| ||| || || || || Sbjct 2177 ATCCCCTCCTTATCCTGAATCTTGGCCTTGACATTGTCAATAGTATCAGAAGACTCCACC 2118 Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 || | ||| |||||||| || || || ||||||| ||| ||||||||| Sbjct 2117 TCCAAAGTGATGGTTTTTCCTGTCAAAGTTTTAACAAA-ATCTGCATT 2071 Score = 109 bits (120), Expect = 1e-18 Identities = 164/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | |||||| | || | ||| | || | ||| || ||| || || || Sbjct 1845 ATACCACCACGAAGACGGAGGACCAGATGGAGGGTCGACTCCTTTTGGATGTTGTAGTCT 1786 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | || |||| |||| || | || |||||||||||||| |||||||| || || || Sbjct 1785 GCCAACGTTCTGCCATCTTCAAGCTGCTTACCAGCAAAGATCAATCTCTGCTGGTCTGGG 1726 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| |||||||| || || ||| ||||| |||| || || ||| Sbjct 1725 GGGATACCTTCCTTATCTTGAATCTTTGCTTTGACATTGTCAATAGTGTCAGAGCTTTCG 1666 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 || || | ||| |||||||| || || ||||| || | || |||||||| || Sbjct 1665 ACCTCCAAAGTGATGGTTTTCCCTGTCAATGTCTTGACGAAGATCTGCATGTT 1613 >seq8384 Length=24589 Score = 122 bits (134), Expect = 2e-22 Identities = 121/157 (77%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 192380 CATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTT 192439 |||| |||| ||||||||||||||| || || ||||| || || ||||| || || || | Sbjct 4198 CATCTTCCAGTTGTTTACCAGCAAATATCAACCTCTGCTGGTCCGGTGGGATCCCCTCCT 4139 Query 192440 TATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAA 192499 |||| || || || || |||||| |||| ||| |||||||| || || | ||| | Sbjct 4138 TATCCTGAATCTTGGCCTTGACATTATCAATAGTATCAGACGATTCCACCTCCAAAGTGA 4079 Query 192500 TGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||||| || || || ||||||| ||| |||||||| Sbjct 4078 TGGTTTTCCCTGTCAAGGTTTTAACAAAGATCTGCAT 4042 Score = 113 bits (124), Expect = 9e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | |||||| | || | ||| | |||| ||| || || ||||||||| Sbjct 4043 ATACCACCACGAAGACGAAGAACCAGATGGAGGGTAGACTCCTTCTGAATGTTATAATCA 3984 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | || || ||| | || || | || || |||||||| || || ||||| || || ||| Sbjct 3983 GCCAAAGTACGTCCGTCCTCAAGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCTGGT 3924 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || |||||||| |||||||| || || || || || || | ||| || || Sbjct 3923 GGGATTCCTTCCTTATCTTGGATCTTTGCCTTGACGTTGTCAATGGTATCCGAACTCTCA 3864 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || | |||||| ||||| || || || ||||| | |||||||||||| Sbjct 3863 ACCTCCAAAGTAATTGTTTTTCCTGTCAAGGTTTTCACAAATATCTGCAT 3814 Score = 105 bits (116), Expect = 1e-17 Identities = 140/193 (73%), Gaps = 1/193 (1%) Strand=Plus/Minus Query 192347 CTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGA 192406 |||| || || || ||||| | || || || | || || | || || |||||||||| Sbjct 3546 CTTTTGA-ATGTTGTAATCGGCCAAGGTACGACCGTCCTCGAGCTGCTTTCCAGCAAAGA 3488 Query 192407 TTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAG 192466 | || ||||| || || || || || |||||||| ||||| ||||| || |||||| Sbjct 3487 TCAACCTCTGCTGGTCTGGGGGGATCCCTTCTTTGTCTTGGATTTTCGCCTTAACATTAT 3428 Query 192467 TTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAA 192526 |||| || || || ||||| ||||| |||||||||||||| | || |||| || Sbjct 3427 CGATAGTGTCAGAGCTCTCGACTTCGAGAGTGATGGTTTTACCAGTAAGAGTCTTAACAA 3368 Query 192527 ATATCTGCATTTT 192539 | |||||||| || Sbjct 3367 AGATCTGCATATT 3355 >seq7910 Length=9655 Score = 122 bits (134), Expect = 2e-22 Identities = 121/157 (77%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 192380 CATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTT 192439 |||| |||| ||||||||||||||| || || ||||| || || ||||| || || || | Sbjct 2434 CATCTTCCAGTTGTTTACCAGCAAATATCAACCTCTGCTGGTCCGGTGGGATCCCCTCCT 2375 Query 192440 TATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAA 192499 |||| || || || || |||||| |||| ||| |||||||| || || | ||| | Sbjct 2374 TATCCTGAATCTTGGCCTTGACATTATCAATAGTATCAGACGATTCCACCTCCAAAGTGA 2315 Query 192500 TGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||||| || || || ||||||| ||| |||||||| Sbjct 2314 TGGTTTTCCCTGTCAAGGTTTTAACAAAGATCTGCAT 2278 Score = 113 bits (124), Expect = 9e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | |||||| | || | ||| | |||| ||| || || ||||||||| Sbjct 2279 ATACCACCACGAAGACGAAGAACCAGATGGAGGGTAGACTCCTTCTGAATGTTATAATCA 2220 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | || || ||| | || || | || || |||||||| || || ||||| || || ||| Sbjct 2219 GCCAAAGTACGTCCGTCCTCAAGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCTGGT 2160 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || |||||||| |||||||| || || || || || || | ||| || || Sbjct 2159 GGGATTCCTTCCTTATCTTGGATCTTTGCCTTGACGTTGTCAATGGTATCCGAACTCTCA 2100 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || | |||||| ||||| || || || ||||| | |||||||||||| Sbjct 2099 ACCTCCAAAGTAATTGTTTTTCCTGTCAAGGTTTTCACAAATATCTGCAT 2050 Score = 105 bits (116), Expect = 1e-17 Identities = 140/193 (73%), Gaps = 1/193 (1%) Strand=Plus/Minus Query 192347 CTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGA 192406 |||| || || || ||||| | || || || | || || | || || |||||||||| Sbjct 1782 CTTTTGA-ATGTTGTAATCGGCCAAGGTACGACCGTCCTCGAGCTGCTTTCCAGCAAAGA 1724 Query 192407 TTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAG 192466 | || ||||| || || || || || |||||||| ||||| ||||| || |||||| Sbjct 1723 TCAACCTCTGCTGGTCTGGGGGGATCCCTTCTTTGTCTTGGATTTTCGCCTTAACATTAT 1664 Query 192467 TTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAA 192526 |||| || || || ||||| ||||| |||||||||||||| | || |||| || Sbjct 1663 CGATAGTGTCAGAGCTCTCGACTTCGAGAGTGATGGTTTTACCAGTAAGAGTCTTAACAA 1604 Query 192527 ATATCTGCATTTT 192539 | |||||||| || Sbjct 1603 AGATCTGCATATT 1591 >seq945 Length=6199 Score = 120 bits (132), Expect = 6e-22 Identities = 362/561 (65%), Gaps = 13/561 (2%) Strand=Plus/Minus Query 49815 TATATTAAACATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTA 49874 |||| ||||| || ||||| ||| ||||||||||| || ||||| || || || | Sbjct 2226 TATAACAAACACGCGAAATCGCAATGCAAACCCTCGTCTCTCGATATCAACTCGTTTGAA 2167 Query 49875 AAAGTTAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTA 49934 || ||||| || |||||||| || | ||||| | |||||| || | |||||| | Sbjct 2166 AACGTTAAACCCGGCATTAACCCACGTTTTTTCAACCAAAAAATCGCGCAAAAACTCCCC 2107 Query 49935 GAAAAGAATATACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTA 49994 ||||| ||||| || ||||| || ||||| || || || | | || | || | ||| Sbjct 2106 GAAAAAAATATCCCTTCGACGCAAGCAAACGCGATAATCCGTTCTGCGAA----AGTTTC 2051 Query 49995 TCATCTA-ATATCCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTC 50053 ||| | ||||| || | |||||| | |||||||| | | | |||| || |||| Sbjct 2050 GGATCCATCAATCCATTTCAAAGCCCAGTTGGCTTTTTTCTCAACACAAGGAATCGTTTC 1991 Query 50054 TATAGCTTTAAATAATTCAtttttttCATNNNNNNNNNNNNNNNNNNNNNNNATTAATAA 50113 ||||| |||||| |||||||||| | || || Sbjct 1990 AATAGCCCGAAATAACCGGTTTTTTTCATTAGAATCTTTAATATAAGATTCCAACAACAA 1931 Query 50114 AGAATACATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTGC 50173 | ||||||||||||||| | | || || || ||||| ||| ||||| | || Sbjct 1930 ACTATACATTTCAGAATGAATATTCTCAATCGCGATTTGGAATCCGTAAAACGCACGCGC 1871 Query 50174 TTCTGAATACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTC-AGATACAATACCAT 50232 || | || ||||| | || || || | | || || ||| || || || | Sbjct 1870 CTCGGCGACTTGGACTTCTTTCATAAACCGACCAGCGAGGTTTTCGAGA-ACGATGCCGT 1812 Query 50233 CAGATGCTGCGAAGAATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCTTTTAAAT 50292 | || || ||||| || || | |||| |||| || || ||| || |||| Sbjct 1811 CTGACGCGGCGAAAAAAGCGAGGACGTGAGTAATGAAGTGGCGTTCGCCGTCGGTTAAGG 1752 Query 50293 TTTCCCA---AGATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAATGATG 50349 ||||| | || |||| | |||||||| |||||||| ||||||||||| | Sbjct 1751 CGTCCCAGTGACGTT---GATCTTCGGATAAATCGACTTCTTCGGCGGTCCAAAATGAGG 1695 Query 50350 CTACGGATTTTTTATACATTT 50370 || ||| |||||||||||||| Sbjct 1694 CTTCGGCTTTTTTATACATTT 1674 >seq5280 Length=29361 Score = 118 bits (130), Expect = 2e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 |||||| | |||||| | || | ||| | || | ||| || ||||| ||||| | Sbjct 6999 ACCACCACGAAGACGGAGCACAAGATGAAGGGTGGACTCCTTCTGAATATTGTAATCTGC 6940 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 | ||| ||| |||| ||||||||||| ||||| ||||| || ||||| ||||| ||||| Sbjct 6939 AAGTGTACGTCCATCTTCCAATTGTTTCCCAGCGAAGATCAACCTCTGCTGATCTGGTGG 6880 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || || || ||||| || || || || ||||| || | ||| || || || || Sbjct 6879 GATCCCCTCCTTATCCTGAATCTTGGCCTTGACATTGTCAATCGTATCAGAAGACTCCAC 6820 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || | ||| |||||||| || || || || || | ||| |||||||| Sbjct 6819 CTCCAAAGTGATGGTTTTCCCTGTCAAGGTCTTCACAAAAATCTGCAT 6772 >seq10926 Length=11099 Score = 116 bits (128), Expect = 7e-21 Identities = 135/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 || || ||||| | | ||| ||| |||| ||||||||||| || || || || || ||| Sbjct 7845 ATGTTGTAATCTGCAAGTGTGCGTCCATCTTCCAATTGTTTCCCTGCGAAAATCAACCTC 7904 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474 || || || ||||| || || || ||||| ||||| || || |||||| || | | Sbjct 7905 TGCTGGTCTGGTGGGATCCCCTCCTTATCCTGTATCTTGGCCTTGACATTATCAATCGTA 7964 Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534 ||||| || || || || | |||||||||||| ||||| || || || | ||| |||||| Sbjct 7965 TCTGAAGACTCCACCTCCAAAGTAATGGTTTTTCCAGTCAACGTCTTGACAAAGATCTGC 8024 Query 192535 AT 192536 || Sbjct 8025 AT 8026 Score = 116 bits (128), Expect = 7e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 192340 GTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCA 192399 |||| |||||| ||| || ||||||| || || || |||| || | ||||| || Sbjct 8286 GTAGACTCTTTCTGGATGTTGTAATCAGCTAGAGTACGACCATCTTCAAGCTGTTTTCCT 8345 Query 192400 GCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTT 192459 |||||||| | ||||| || || ||||| ||||||||||||||||| || ||| || Sbjct 8346 GCAAAGATAAGCCTCTGCTGGTCCGGTGGGATTCCTTCTTTATCTTGGATCTTAGCCTTG 8405 Query 192460 ACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTT 192519 || || || | ||| || ||| || || | |||||||||||| || || || ||| Sbjct 8406 ACGTTGTCAATGGTATCCGAGCTTTCAACCTCCAAAGTAATGGTTTTCCCTGTCAAAGTT 8465 Query 192520 TTAATAAATATCTGCAT 192536 || | ||| |||||||| Sbjct 8466 TTCACAAAAATCTGCAT 8482 Score = 100 bits (110), Expect = 6e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| || | || | ||| || || | |||| ||| || ||| || || || Sbjct 8025 ATCCCACCCCTCAACCGCAGTACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCT 8084 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | || || || |||| || | |||||| || |||||||| | || || || || ||| Sbjct 8085 GCCAAAGTACGCCCATCTTCGAGTTGTTTTCCTGCAAAGATAAGCCTTTGCTGGTCTGGT 8144 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || |||||||||||||| || || ||| || ||||| || | ||| || ||| Sbjct 8145 GGGATTCCTTCTTTATCCTGAATCTTAGCCTTGACATTGTCAATCGTATCAGAACTTTCA 8204 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || |||| ||| || ||||| || || || || || | ||| |||||||| Sbjct 8205 ACCTCTAAAGTGATTGTTTTTCCGGTCAACGTCTTGACAAAAATCTGCAT 8254 >seq4675 Length=16269 Score = 105 bits (116), Expect = 1e-17 Identities = 140/193 (73%), Gaps = 1/193 (1%) Strand=Plus/Minus Query 192347 CTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGA 192406 |||| || || || ||||| | || || || | || || | || || |||||||||| Sbjct 15933 CTTTTGA-ATGTTGTAATCGGCCAAGGTACGACCGTCCTCGAGCTGCTTTCCAGCAAAGA 15875 Query 192407 TTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAG 192466 | || ||||| || || || || || |||||||| ||||| ||||| || |||||| Sbjct 15874 TCAACCTCTGCTGGTCTGGGGGGATCCCTTCTTTGTCTTGGATTTTCGCCTTAACATTAT 15815 Query 192467 TTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAA 192526 |||| || || || ||||| ||||| |||||||||||||| | || |||| || Sbjct 15814 CGATAGTGTCAGAGCTCTCGACTTCGAGAGTGATGGTTTTACCAGTAAGAGTCTTAACAA 15755 Query 192527 ATATCTGCATTTT 192539 | |||||||| || Sbjct 15754 AGATCTGCATATT 15742 >seq16006 Length=16259 Score = 98.7 bits (108), Expect = 2e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 192328 ACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCC 192387 || ||||| | |||| |||||| |||||| || || | || || || |||| || Sbjct 13471 ACCAAATGAAGGGTAGACTCTTTCTGGATATTGTAGTCTGCTAGAGTACGCCCATCTTCG 13412 Query 192388 AATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGT 192447 | ||||| || |||||||| | || || || || || || || || |||||||| || Sbjct 13411 AGCTGTTTTCCTGCAAAGATAAGCCTTTGCTGGTCTGGCGGGATCCCCTCTTTATCCTGA 13352 Query 192448 ATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTA 192507 || ||| || || || || | ||| || ||| || |||| ||| |||||||| Sbjct 13351 ATCTTAGCCTTGACGTTGTCAATCGTATCAGAACTTTCAACCTCTAAAGTGATGGTTTTT 13292 Query 192508 CCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || ||||| | |||||||||||| Sbjct 13291 CCTGTCAAGGTTTTCACAAATATCTGCAT 13263 Score = 95.1 bits (104), Expect = 2e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369 ||||| | |||||| | || | ||| | || | |||||| || || ||||||| Sbjct 13717 CCACCACGAAGACGAAGCACAAGATGGAGGGTCGACTCTTTCTGAATGTTGTAATCAGCA 13658 Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429 | || | |||| |||| || ||||||||||| || || ||||| || || ||||| Sbjct 13657 AGGGTCCTGCCATCTTCCAGCTGCTTACCAGCAAATATCAACCTCTGCTGGTCCGGTGGG 13598 Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489 || ||||| |||||||| || || || || || || | ||| || |||||| Sbjct 13597 ATACCTTCCTTATCTTGAATCTTGGCCTTGACGTTGTCAATCGTATCGGAGCTTTCTACC 13538 Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || | ||| ||||| || || || || ||||| | || |||||||| Sbjct 13537 TCCAAAGTGATGGTCTTTCCGGTCAAGGTTTTCACGAAAATCTGCAT 13491 >seq14670 Length=61898 Score = 91.5 bits (100), Expect = 3e-13 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 |||||| ||||||| | ||||| | |||| || |||||||| |||||||| || ||||| Sbjct 31944 GATATTGTAATCAGCAAGTGTTCTTCCATCTTCTAATTGTTTCCCAGCAAATATCAATCT 32003 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATC 192443 ||||||||||| || ||||| ||||| || Sbjct 32004 TTGTTGATCAGGCGGAATTCCCTCTTTGTC 32033 >seq6802 Length=18417 Score = 91.5 bits (100), Expect = 3e-13 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 |||||| ||||||| | ||||| | |||| || |||||||| |||||||| || ||||| Sbjct 11240 GATATTGTAATCAGCAAGTGTTCTTCCATCTTCTAATTGTTTCCCAGCAAATATCAATCT 11181 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATC 192443 ||||||||||| || ||||| ||||| || Sbjct 11180 TTGTTGATCAGGCGGAATTCCCTCTTTGTC 11151 >seq6637 Length=15695 Score = 91.5 bits (100), Expect = 3e-13 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 |||||| ||||||| | ||||| | |||| || |||||||| |||||||| || ||||| Sbjct 3952 GATATTGTAATCAGCAAGTGTTCTTCCATCTTCTAATTGTTTCCCAGCAAATATCAATCT 3893 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATC 192443 ||||||||||| || ||||| ||||| || Sbjct 3892 TTGTTGATCAGGCGGAATTCCCTCTTTGTC 3863 >seq4586 Length=18721 Score = 84.2 bits (92), Expect = 4e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 192391 TGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATT 192450 ||||| || |||||||| | ||||| ||||| || || || |||||||| ||||| || Sbjct 13962 TGTTTCCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGAATCCCTTCTTTGTCTTGAATC 14021 Query 192451 TTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCA 192510 || || ||||| || | || || || || || ||||| ||||| || ||| Sbjct 14022 TTGGCCTTAACATTGTCAATGGTGTCAGAGCTCTCCACCTCGAGAGTGATGGTCTTTCCA 14081 Query 192511 GTTAATGTTTTAATAAATATCTGCAT 192536 || || ||||| | |||||||||||| Sbjct 14082 GTCAAAGTTTTCACAAATATCTGCAT 14107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984226780976250