Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conyza_20canadensis_20[genbank_20GCA_5F000775935.1_202014-11-13] 20,075 sequences; 326,165,195 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq13411 127 4e-24 seq5340 127 4e-24 seq8384 122 2e-22 seq7910 122 2e-22 seq16550 118 2e-21 seq10926 118 2e-21 seq8889 118 2e-21 seq4675 105 1e-17 seq5280 100 5e-16 seq16006 98.7 2e-15 >seq13411 Length=19963 Score = 127 bits (140), Expect = 4e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 171855 CGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCG 171914 ||||| || ||||| | ||| | ||||| ||||| || || | ||| | | || Sbjct 11476 CGTAAGACCAAATGAAGAGTGGATTCTTTTTGGATATTGTAGTCGGCTAATGTCCTGCCG 11417 Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || || | |||||| || ||||| ||||| | |||||||| ||||| || |||||||| Sbjct 11416 TCTTCAAGTTGTTTGCCTGCAAAGATTAAACGTTGTTGGTCTGGTGGGATGCCTTCTTTG 11357 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 ||||| || || ||| ||||| || || || || ||||| ||||||| || || Sbjct 11356 TCTTGAATCTTGGCTTTCACATTGTCGATTGTGTCGGAGGATTCGACTTCTAAGGTTATT 11297 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 ||||| || ||||| ||||| | ||| ||||||||||| Sbjct 11296 GTTTTGCCGGTTAAGGTTTTTACGAAGATCTGCATTTT 11259 >seq5340 Length=22833 Score = 127 bits (140), Expect = 4e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 171855 CGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCG 171914 ||||| || ||||| | ||| | ||||| ||||| || || | ||| | | || Sbjct 14275 CGTAAGACCAAATGAAGAGTGGATTCTTTTTGGATATTGTAGTCGGCTAATGTCCTGCCG 14334 Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || || | |||||| || ||||| ||||| | |||||||| ||||| || |||||||| Sbjct 14335 TCTTCAAGTTGTTTGCCTGCAAAGATTAAACGTTGTTGGTCTGGTGGGATGCCTTCTTTG 14394 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 ||||| || || ||| ||||| || || || || ||||| ||||||| || || Sbjct 14395 TCTTGAATCTTGGCTTTCACATTGTCGATTGTGTCGGAGGATTCGACTTCTAAGGTTATT 14454 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 ||||| || ||||| ||||| | ||| ||||||||||| Sbjct 14455 GTTTTGCCGGTTAAGGTTTTTACGAAGATCTGCATTTT 14492 >seq8384 Length=24589 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | ||| || | || | ||| | |||| ||| || ||| |||||||| Sbjct 4043 ATACCACCACGAAGACGAAGAACCAGATGGAGGGTAGACTCCTTCTGAATGTTATAATCA 3984 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | |||| ||| |||| || | || || ||||||||||| || ||||| ||||| ||| Sbjct 3983 GCCAAAGTACGTCCGTCCTCAAGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCTGGT 3924 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || |||||||| |||||||| || || || || || || ||||| || || Sbjct 3923 GGGATTCCTTCCTTATCTTGGATCTTTGCCTTGACGTTGTCAATGGTATCCGAACTCTCA 3864 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || | |||||| ||||| || || || ||||| | ||||||||||| Sbjct 3863 ACCTCCAAAGTAATTGTTTTTCCTGTCAAGGTTTTCACAAATATCTGCAT 3814 Score = 122 bits (134), Expect = 2e-22 Identities = 120/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || |||| ||||||||||||||| || || ||||| ||||| ||||| || || || ||| Sbjct 4196 TCTTCCAGTTGTTTACCAGCAAATATCAACCTCTGCTGGTCCGGTGGGATCCCCTCCTTA 4137 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 || || || || || |||||| |||||||| |||||||| || || | ||| ||| Sbjct 4136 TCCTGAATCTTGGCCTTGACATTATCAATAGTATCAGACGATTCCACCTCCAAAGTGATG 4077 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| || || || ||||||| || |||||||| Sbjct 4076 GTTTTCCCTGTCAAGGTTTTAACAAAGATCTGCAT 4042 Score = 105 bits (116), Expect = 1e-17 Identities = 135/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 ||| || ||||| | || | || |||| || | || || |||||||| || || || Sbjct 3540 AATGTTGTAATCGGCCAAGGTACGACCGTCCTCGAGCTGCTTTCCAGCAAAGATCAACCT 3481 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 ||| ||||| || || || |||||||| ||||| ||||| || |||||| ||||| Sbjct 3480 CTGCTGGTCTGGGGGGATCCCTTCTTTGTCTTGGATTTTCGCCTTAACATTATCGATAGT 3421 Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 || || || ||||| ||||| |||||||||||||| | || |||| || ||||| Sbjct 3420 GTCAGAGCTCTCGACTTCGAGAGTGATGGTTTTACCAGTAAGAGTCTTAACAAAGATCTG 3361 Query 172067 CATTTT 172072 ||| || Sbjct 3360 CATATT 3355 >seq7910 Length=9655 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | ||| || | || | ||| | |||| ||| || ||| |||||||| Sbjct 2279 ATACCACCACGAAGACGAAGAACCAGATGGAGGGTAGACTCCTTCTGAATGTTATAATCA 2220 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | |||| ||| |||| || | || || ||||||||||| || ||||| ||||| ||| Sbjct 2219 GCCAAAGTACGTCCGTCCTCAAGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCTGGT 2160 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || |||||||| |||||||| || || || || || || ||||| || || Sbjct 2159 GGGATTCCTTCCTTATCTTGGATCTTTGCCTTGACGTTGTCAATGGTATCCGAACTCTCA 2100 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || | |||||| ||||| || || || ||||| | ||||||||||| Sbjct 2099 ACCTCCAAAGTAATTGTTTTTCCTGTCAAGGTTTTCACAAATATCTGCAT 2050 Score = 122 bits (134), Expect = 2e-22 Identities = 120/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || |||| ||||||||||||||| || || ||||| ||||| ||||| || || || ||| Sbjct 2432 TCTTCCAGTTGTTTACCAGCAAATATCAACCTCTGCTGGTCCGGTGGGATCCCCTCCTTA 2373 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 || || || || || |||||| |||||||| |||||||| || || | ||| ||| Sbjct 2372 TCCTGAATCTTGGCCTTGACATTATCAATAGTATCAGACGATTCCACCTCCAAAGTGATG 2313 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| || || || ||||||| || |||||||| Sbjct 2312 GTTTTCCCTGTCAAGGTTTTAACAAAGATCTGCAT 2278 Score = 105 bits (116), Expect = 1e-17 Identities = 135/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 ||| || ||||| | || | || |||| || | || || |||||||| || || || Sbjct 1776 AATGTTGTAATCGGCCAAGGTACGACCGTCCTCGAGCTGCTTTCCAGCAAAGATCAACCT 1717 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 ||| ||||| || || || |||||||| ||||| ||||| || |||||| ||||| Sbjct 1716 CTGCTGGTCTGGGGGGATCCCTTCTTTGTCTTGGATTTTCGCCTTAACATTATCGATAGT 1657 Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 || || || ||||| ||||| |||||||||||||| | || |||| || ||||| Sbjct 1656 GTCAGAGCTCTCGACTTCGAGAGTGATGGTTTTACCAGTAAGAGTCTTAACAAAGATCTG 1597 Query 172067 CATTTT 172072 ||| || Sbjct 1596 CATATT 1591 >seq16550 Length=20979 Score = 118 bits (130), Expect = 2e-21 Identities = 136/183 (74%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 ||| || ||||||| | | ||| | || ||||||||||| || || ||||| || || Sbjct 17264 AATGTTGTAATCTGCAAGTGTGCGTCCATCTTCCAATTGTTTCCCTGCGAAAATCAACCT 17323 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 ||| ||||| ||||| || || || ||||| ||||| || || |||||| || || Sbjct 17324 CTGCTGGTCTGGTGGGATCCCCTCCTTATCCTGTATCTTGGCCTTGACATTATCAATCGT 17383 Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 |||||| || || || || | |||||||||||| ||||| || || || | || ||||| Sbjct 17384 ATCTGAAGACTCCACCTCCAAAGTAATGGTTTTTCCAGTCAACGTCTTGACAAAGATCTG 17443 Query 172067 CAT 172069 ||| Sbjct 17444 CAT 17446 Score = 109 bits (120), Expect = 1e-18 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | ||| || | || ||||| | ||| | ||| || ||| || ||||| Sbjct 17901 ATACCACCACGAAGACGAAGAACCAAATGCAGAGTCGACTCCTTTTGAATGTTGTAATCA 17960 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | | | || | || || | || || |||||||| || | ||||||||||| ||| Sbjct 17961 GCAAGGGTACGCCCATCCTCAAGCTGCTTTCCAGCAAAGATCAGCCTCTGTTGGTCTGGT 18020 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| |||||||| || || || |||||| |||||||| || ||| Sbjct 18021 GGGATCCCTTCCTTATCTTGAATCTTTGCCTTGACATTATCAATAGTATCCGAGCTTTCA 18080 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || | ||| |||||||| || || || ||||| | || |||||||| Sbjct 18081 ACCTCCAAAGTGATGGTTTTCCCTGTCAAAGTTTTTACAAAAATCTGCAT 18130 Score = 109 bits (120), Expect = 1e-18 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | ||| || | || || || | ||| | || || || ||||||||| Sbjct 18129 ATACCACCACGAAGACGAAGGACCAAGTGCAGAGTTGATTCCTTCTGGATGTTATAATCT 18188 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | || | | | || || | ||| || ||||||||||| |||||||| ||||| ||| Sbjct 18189 GCCAAGGTCCTGCCATCCTCGAGTTGCTTGCCAGCAAAAATCAATCTCTGCTGGTCTGGT 18248 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| |||||||| || || || |||||| || || ||||| ||| Sbjct 18249 GGGATCCCTTCCTTATCTTGAATCTTCGCCTTAACATTATCGATTGTGTCTGAGCTTTCG 18308 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || | ||||||||| || || || || || || | || |||||||| Sbjct 18309 ACCTCCAAAGTAATGGTCTTTCCTGTCAACGTCTTGACAAAGATCTGCAT 18358 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||| || | || | ||| || || | |||| ||| || || || || ||| Sbjct 17445 ATCCCACCCCTCAACCGCAGTACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCT 17504 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | |||| || | || || | |||||| || ||||| || | || || ||||| ||| Sbjct 17505 GCCAAAGTACGCCCATCTTCGAGTTGTTTTCCTGCAAAGATAAGCCTTTGCTGGTCTGGT 17564 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || |||||||||||||| || || ||| || ||||| || ||||| || ||| Sbjct 17565 GGGATTCCTTCTTTATCCTGAATCTTAGCCTTGACATTGTCAATCGTATCAGAACTTTCA 17624 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || |||| ||| || ||||| || || || || || | || |||||||| Sbjct 17625 ACCTCTAAAGTGATTGTTTTTCCGGTCAACGTCTTGACAAAAATCTGCAT 17674 >seq10926 Length=11099 Score = 118 bits (130), Expect = 2e-21 Identities = 136/183 (74%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 ||| || ||||||| | | ||| | || ||||||||||| || || ||||| || || Sbjct 7844 AATGTTGTAATCTGCAAGTGTGCGTCCATCTTCCAATTGTTTCCCTGCGAAAATCAACCT 7903 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 ||| ||||| ||||| || || || ||||| ||||| || || |||||| || || Sbjct 7904 CTGCTGGTCTGGTGGGATCCCCTCCTTATCCTGTATCTTGGCCTTGACATTATCAATCGT 7963 Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 |||||| || || || || | |||||||||||| ||||| || || || | || ||||| Sbjct 7964 ATCTGAAGACTCCACCTCCAAAGTAATGGTTTTTCCAGTCAACGTCTTGACAAAGATCTG 8023 Query 172067 CAT 172069 ||| Sbjct 8024 CAT 8026 Score = 104 bits (114), Expect = 4e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 171873 GTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCA 171932 |||| |||||| || || ||||| | || || || | || || | ||||| || Sbjct 8286 GTAGACTCTTTCTGGATGTTGTAATCAGCTAGAGTACGACCATCTTCAAGCTGTTTTCCT 8345 Query 171933 GCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTT 171992 ||||| || | ||||| ||||| ||||| ||||||||||||||||| || ||| || Sbjct 8346 GCAAAGATAAGCCTCTGCTGGTCCGGTGGGATTCCTTCTTTATCTTGGATCTTAGCCTTG 8405 Query 171993 ACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTT 172052 || || || ||||| || ||| || || | |||||||||||| || || || ||| Sbjct 8406 ACGTTGTCAATGGTATCCGAGCTTTCAACCTCCAAAGTAATGGTTTTCCCTGTCAAAGTT 8465 Query 172053 TTAATGAATATCTGCAT 172069 || | || |||||||| Sbjct 8466 TTCACAAAAATCTGCAT 8482 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||| || | || | ||| || || | |||| ||| || || || || ||| Sbjct 8025 ATCCCACCCCTCAACCGCAGTACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCT 8084 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | |||| || | || || | |||||| || ||||| || | || || ||||| ||| Sbjct 8085 GCCAAAGTACGCCCATCTTCGAGTTGTTTTCCTGCAAAGATAAGCCTTTGCTGGTCTGGT 8144 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || |||||||||||||| || || ||| || ||||| || ||||| || ||| Sbjct 8145 GGGATTCCTTCTTTATCCTGAATCTTAGCCTTGACATTGTCAATCGTATCAGAACTTTCA 8204 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || |||| ||| || ||||| || || || || || | || |||||||| Sbjct 8205 ACCTCTAAAGTGATTGTTTTTCCGGTCAACGTCTTGACAAAAATCTGCAT 8254 Score = 84.2 bits (92), Expect = 4e-11 Identities = 131/185 (71%), Gaps = 2/185 (1%) Strand=Plus/Plus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 || || ||||||| || | || |||| || | || || |||||||| || || ||| Sbjct 8755 ATGTTGTAATCTGCCAAGGTACGCCCGTCCTCGAGCTGCTTGCCAGCAAAGATCAACCTC 8814 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 |||||||| ||||| || ||||| || || || ||||| || |||||| || ||| Sbjct 8815 TGTTGGTCTGGTGGGATCCCTTCCTTGTCCTGGATTTTCGCCTTGACATTATCGATGGTA 8874 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 ||||| || || || ||||| || | |||||| || | || || | || |||||| Sbjct 8875 TCTGAGCTCTCGACCTCGAGAGTGATAG-TTTACC-GTAAGAGTCTTCACAAAGATCTGC 8932 Query 172068 ATTTT 172072 || || Sbjct 8933 ATATT 8937 >seq8889 Length=9065 Score = 118 bits (130), Expect = 2e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||| | ||| || | || | ||| | |||| ||| || ||| |||||||| Sbjct 2073 ATTCCACCACGAAGACGAAGAACCAGATGGAGGGTAGACTCCTTCTGAATGTTATAATCG 2014 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | |||| ||| | || || | ||||| ||||||||||| || ||||| ||||| ||| Sbjct 2013 GCCAAAGTACGTCCATCCTCAAGCTGTTTGCCAGCAAAAATCAACCTCTGCTGGTCTGGT 1954 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || |||||||| |||||||| || ||| || || || || ||||| || || Sbjct 1953 GGAATTCCTTCCTTATCTTGGATCTTAGCCTTGACGTTGTCAATGGTATCAGAGCTCTCA 1894 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || | ||| |||||||| || || ||||| || | || |||||||| Sbjct 1893 ACCTCCAAAGTGATGGTTTTTCCCGTCAATGTCTTCACAAAGATCTGCAT 1844 Score = 105 bits (116), Expect = 1e-17 Identities = 163/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | ||| || | || | ||| | || | ||| || || || || ||| Sbjct 1845 ATACCACCACGAAGACGGAGGACCAGATGGAGGGTCGACTCCTTTTGGATGTTGTAGTCT 1786 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 | || | || | || || | || ||||||||||| || |||||||| ||||| || Sbjct 1785 GCCAACGTTCTGCCATCTTCAAGCTGCTTACCAGCAAAGATCAATCTCTGCTGGTCTGGG 1726 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| |||||||| || || ||| ||||| ||||| || || ||| Sbjct 1725 GGGATACCTTCCTTATCTTGAATCTTTGCTTTGACATTGTCAATAGTGTCAGAGCTTTCG 1666 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 || || | ||| |||||||| || || ||||| || | ||| |||||||| || Sbjct 1665 ACCTCCAAAGTGATGGTTTTCCCTGTCAATGTCTTGACGAAGATCTGCATGTT 1613 Score = 105 bits (116), Expect = 1e-17 Identities = 143/198 (72%), Gaps = 1/198 (1%) Strand=Plus/Minus Query 171873 GTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCA 171932 |||| ||| || ||| || ||||| | | | ||| | || |||||||||||||| Sbjct 2267 GTAGACTCCTTCTGAATGTTGTAATCAGCAAGTGTCCGTCCATCTTCCAATTGTTTACCG 2208 Query 171933 GCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTT 171992 ||||| || | ||||| ||||| ||||| || || || ||||| || || || || Sbjct 2207 GCAAAGATGAGCCTCTGCTGGTCTGGTGGGATCCCCTCCTTATCCTGAATCTTGGCCTTG 2148 Query 171993 ACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTT 172052 ||||| |||||||| || || || || || | ||| |||||||| || || || ||| Sbjct 2147 ACATTGTCAATAGTATCAGAAGACTCCACCTCCAAAGTGATGGTTTTTCCTGTCAAAGTT 2088 Query 172053 TTAATGAATATCTGCATT 172070 |||| || ||||||||| Sbjct 2087 TTAA-CAAAATCTGCATT 2071 >seq4675 Length=16269 Score = 105 bits (116), Expect = 1e-17 Identities = 135/186 (73%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 ||| || ||||| | || | || |||| || | || || |||||||| || || || Sbjct 15927 AATGTTGTAATCGGCCAAGGTACGACCGTCCTCGAGCTGCTTTCCAGCAAAGATCAACCT 15868 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 ||| ||||| || || || |||||||| ||||| ||||| || |||||| ||||| Sbjct 15867 CTGCTGGTCTGGGGGGATCCCTTCTTTGTCTTGGATTTTCGCCTTAACATTATCGATAGT 15808 Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 || || || ||||| ||||| |||||||||||||| | || |||| || ||||| Sbjct 15807 GTCAGAGCTCTCGACTTCGAGAGTGATGGTTTTACCAGTAAGAGTCTTAACAAAGATCTG 15748 Query 172067 CATTTT 172072 ||| || Sbjct 15747 CATATT 15742 >seq5280 Length=29361 Score = 100 bits (110), Expect = 5e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 |||||| | ||| || | || | ||| | || | ||| || |||||| ||||||| Sbjct 6999 ACCACCACGAAGACGGAGCACAAGATGAAGGGTGGACTCCTTCTGAATATTGTAATCTGC 6940 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 | | ||| | || ||||||||||| ||||| || || || ||||| || || ||||| Sbjct 6939 AAGTGTACGTCCATCTTCCAATTGTTTCCCAGCGAAGATCAACCTCTGCTGATCTGGTGG 6880 Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021 || || || ||||| || || || || ||||| || ||||| || || || || Sbjct 6879 GATCCCCTCCTTATCCTGAATCTTGGCCTTGACATTGTCAATCGTATCAGAAGACTCCAC 6820 Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || | ||| |||||||| || || || || || | || |||||||| Sbjct 6819 CTCCAAAGTGATGGTTTTCCCTGTCAAGGTCTTCACAAAAATCTGCAT 6772 >seq16006 Length=16259 Score = 98.7 bits (108), Expect = 2e-15 Identities = 167/238 (70%), Gaps = 3/238 (1%) Strand=Plus/Minus Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892 ||||| || ||||| | ||| || | || | ||| | || | |||||| ||| || Sbjct 13726 TTTCAGAAC-CCACCACGAAGACGAAGCACAAGATGGAGGGTCGACTCTTTCTGAATGTT 13668 Query 171893 ATAATCTGATAAAGATCGTTCG-TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTT 171951 ||||| | || | || | | || |||| || ||||||||||| || || ||||| | Sbjct 13667 GTAATCAGC-AAGGGTCCTGCCATCTTCCAGCTGCTTACCAGCAAATATCAACCTCTGCT 13609 Query 171952 GGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTG 172011 |||| ||||| || ||||| |||||||| || || || || || || ||||| | Sbjct 13608 GGTCCGGTGGGATACCTTCCTTATCTTGAATCTTGGCCTTGACGTTGTCAATCGTATCGG 13549 Query 172012 ACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 | |||||| || | ||| ||||| || || || || ||||| | ||| |||||||| Sbjct 13548 AGCTTTCTACCTCCAAAGTGATGGTCTTTCCGGTCAAGGTTTTCACGAAAATCTGCAT 13491 Score = 93.3 bits (102), Expect = 8e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 171861 ACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCC 171920 || ||||| | |||| |||||| ||||| || |||| || || || | || || Sbjct 13471 ACCAAATGAAGGGTAGACTCTTTCTGGATATTGTAGTCTGCTAGAGTACGCCCATCTTCG 13412 Query 171921 AATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGT 171980 | ||||| || ||||| || | || || ||||| || || || || |||||||| || Sbjct 13411 AGCTGTTTTCCTGCAAAGATAAGCCTTTGCTGGTCTGGCGGGATCCCCTCTTTATCCTGA 13352 Query 171981 ATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTA 172040 || ||| || || || || ||||| || ||| || |||| ||| |||||||| Sbjct 13351 ATCTTAGCCTTGACGTTGTCAATCGTATCAGAACTTTCAACCTCTAAAGTGATGGTTTTT 13292 Query 172041 CCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || || ||||| | ||||||||||| Sbjct 13291 CCTGTCAAGGTTTTCACAAATATCTGCAT 13263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 904908867435000