Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conyza_20canadensis_20[genbank_20GCA_5F000775935.1_202014-11-13] 20,075 sequences; 326,165,195 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq4586 161 8e-35 seq16550 150 1e-31 seq8384 150 1e-31 seq7910 150 1e-31 seq4675 149 5e-31 seq1845 149 5e-31 seq16006 143 2e-29 seq13411 141 7e-29 seq5340 141 7e-29 seq10926 125 6e-24 seq5280 122 7e-23 seq14670 114 1e-20 seq6802 114 1e-20 seq6637 114 1e-20 seq8889 113 3e-20 >seq4586 Length=18721 Score = 161 bits (178), Expect = 8e-35 Identities = 179/236 (76%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || ||||||||||| |||||||| ||||| || ||||| || |||||||| || || ||| Sbjct 13881 CCACCCCTCAAACGAAGCACCAAGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCAGCA 13940 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| ||| || || || ||||| || ||| | |||| || |||||||| || ||| Sbjct 13941 AGGGTACGACCGTCCTCAAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGA 14000 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || ||||||||||| ||| || | || ||| | || | |||||||| || || Sbjct 14001 ATCCCTTCTTTGTCTTG-AATCTTGGCCTTAACATTGTCAATGGTGTCAGAGCTCTCCAC 14059 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTAAAAC 29794 || ||||| || || || ||||| || ||||| |||||||||||||| | |||| Sbjct 14060 CTCGAGAGTGATGGTCTTTCCAGTCAAAGTTTTCACAAATATCTGCATCTGTAAAC 14115 >seq16550 Length=20979 Score = 150 bits (166), Expect = 1e-31 Identities = 172/230 (75%), Gaps = 1/230 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||||||||| | || ||| | ||| || || ||||| |||||||| || || || || Sbjct 18360 CCTCCCCTCAACCTCAACACAAGATGGAGGGTTGATTCCTTTTGAATATTGTAGTCTGCC 18419 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| | ||| ||||| || || |||||| | ||||| ||||||||||| || || Sbjct 18420 AGGGTCCTGCCATCCTCGAGCTGCTTTCCAGCAAAGATCAACCTTTGCTGATCTGGGGGG 18479 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||| ||||||||||| ||||| | | ||| | || | ||||||||| || ||| Sbjct 18480 ATACCTTCTTTGTCTTG-GATTTTGGCCTTACATTATCGATAGTGTCAGAGCTCTCGACT 18538 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || ||||| || || || || || | || |||||||| |||||||| || Sbjct 18539 TCGAGAGTGATGGTCTTACCCGTGAGAGTCTTAACAAAGATCTGCATATT 18588 Score = 125 bits (138), Expect = 6e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || |||||||| ||||| ||||| ||||| || || || || || ||||| || || || Sbjct 17448 CCACCCCTCAACCGCAGTACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCTGCC 17507 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || ||| ||||||||||| || ||| | || | |||||||| || || || Sbjct 17508 AAAGTACGCCCATCTTCGAGTTGTTTTCCTGCAAAGATAAGCCTTTGCTGGTCTGGTGGG 17567 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || ||||| || || ||| || | |||||| | || | || |||||| ||| || Sbjct 17568 ATTCCTTCTTTATCCTG-AATCTTAGCCTTGACATTGTCAATCGTATCAGAACTTTCAAC 17626 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | ||| || ||||| || || || || || ||||| |||||||| Sbjct 17627 CTCTAAAGTGATTGTTTTTCCGGTCAACGTCTTGACAAAAATCTGCAT 17674 Score = 123 bits (136), Expect = 2e-23 Identities = 159/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || |||||||| || || || || ||||||||||| ||||| |||| ||| || Sbjct 17915 ACGAAGAACCAAATGCAGAGTCGACTCCTTTTGAATGTTGTAATCAGCAAGGGTACGCCC 17974 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || |||||| | |||| || || || || || || || || || || Sbjct 17975 ATCCTCAAGCTGCTTTCCAGCAAAGATCAGCCTCTGTTGGTCTGGTGGGATCCCTTCCTT 18034 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||||| ||| |||| |||||| | || | ||| || || ||| || || | ||| | Sbjct 18035 ATCTTG-AATCTTTGCCTTGACATTATCAATAGTATCCGAGCTTTCAACCTCCAAAGTGA 18093 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | ||||| || || || ||||| ||||| |||||||| Sbjct 18094 TGGTTTTCCCTGTCAAAGTTTTTACAAAAATCTGCAT 18130 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || |||||||| | |||||| | ||| || || || || || |||||||||||||| || Sbjct 17676 CCACCCCTCAACCTCAGCACAAGATGGAGTGTAGACTCCTTCTGAATGTTATAATCTGCC 17735 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | ||| || || ||||| || ||| | || | || |||||||| || || Sbjct 17736 AACGTCCTGCCATCTTCAAGCTGTTTACCTGCAAAGATAAGCCTCTGCTGATCTGGTGGG 17795 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || ||||| || ||||| | ||| |||||| | || | || || || || ||| Sbjct 17796 ATCCCCTCCTTATCTTGGATTTTGGCCTTGACATTATCGATGGTATCTGAGCTCTCGACT 17855 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | ||| || || || ||||| |||||||| ||||| |||||||| Sbjct 17856 TCCAAAGTGATTGTCTTTCCAGTCAAGGTTTTCACAAAGATCTGCAT 17902 Score = 118 bits (130), Expect = 8e-22 Identities = 158/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || ||||| || || || ||||| || || ||||||||||| || | ||| | Sbjct 18143 ACGAAGGACCAAGTGCAGAGTTGATTCCTTCTGGATGTTATAATCTGCCAAGGTCCTGCC 18202 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| |||||||| ||||||||| | |||||||| ||||| || || || || || || || Sbjct 18203 ATCCTCGAGTTGCTTGCCAGCAAAAATCAATCTCTGCTGGTCTGGTGGGATCCCTTCCTT 18262 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||||| ||| || | || ||| | || | ||||| || ||| || || | ||| | Sbjct 18263 ATCTTG-AATCTTCGCCTTAACATTATCGATTGTGTCTGAGCTTTCGACCTCCAAAGTAA 18321 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || || || || || || || ||||| |||||||| Sbjct 18322 TGGTCTTTCCTGTCAACGTCTTGACAAAGATCTGCAT 18358 >seq8384 Length=24589 Score = 150 bits (166), Expect = 1e-31 Identities = 165/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| ||||| | ||||| ||||| || || |||||||| ||||| |||| || | | Sbjct 4257 ACGGAGCACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCGGCAAGCGTCCTACC 4198 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || |||||||| |||||| ||||||| || ||||| ||||| || || ||||| || Sbjct 4197 ATCTTCCAGTTGTTTACCAGCAAATATCAACCTCTGCTGGTCCGGTGGGATCCCCTCCTT 4138 Query 29691 GTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 || || ||| || | |||||| | || | ||| ||||| ||| || || | ||| | Sbjct 4137 ATCCTG-AATCTTGGCCTTGACATTATCAATAGTATCAGACGATTCCACCTCCAAAGTGA 4079 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | ||||| || || |||||||||||||| |||||||| Sbjct 4078 TGGTTTTCCCTGTCAAGGTTTTAACAAAGATCTGCAT 4042 Score = 149 bits (164), Expect = 5e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || |||||||| | || || | ||| || || ||||| ||||||||||| ||||| || Sbjct 3584 CCGCCCCTCAACCTGAGAACAAGATGGAGGGTTGATTCCTTTTGAATGTTGTAATCGGCC 3525 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| ||| || ||||| || || |||||| | ||||| || ||||| || || || Sbjct 3524 AAGGTACGACCGTCCTCGAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGG 3465 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || ||||||||||| | ||| || ||| | || | ||||||||| || ||| Sbjct 3464 ATCCCTTCTTTGTCTTGGATTTTCGCCTTAACATTATCGATAGTGTCAGAGCTCTCGACT 3405 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || ||||| || ||||| ||||| | || |||||||| |||||||| || Sbjct 3404 TCGAGAGTGATGGTTTTACCAGTAAGAGTCTTAACAAAGATCTGCATATT 3355 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || |||| ||| || || || || || |||||||||||||| || | || || Sbjct 4029 ACGAAGAACCAGATGGAGGGTAGACTCCTTCTGAATGTTATAATCAGCCAAAGTACGTCC 3970 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || || || || ||||||||| | ||||| || ||||| || || || || || || || Sbjct 3969 GTCCTCAAGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCTGGTGGGATTCCTTCCTT 3910 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||||| | ||| ||||| | || | || || ||| || || || | ||| || Sbjct 3909 ATCTTGGATCTTTGCCTTGACGTTGTCAATGGTATCCGAACTCTCAACCTCCAAAGTAAT 3850 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || || |||||||| |||||||||||||| Sbjct 3849 TGTTTTTCCTGTCAAGGTTTTCACAAATATCTGCAT 3814 >seq7910 Length=9655 Score = 150 bits (166), Expect = 1e-31 Identities = 165/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| ||||| | ||||| ||||| || || |||||||| ||||| |||| || | | Sbjct 2493 ACGGAGCACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCGGCAAGCGTCCTACC 2434 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || |||||||| |||||| ||||||| || ||||| ||||| || || ||||| || Sbjct 2433 ATCTTCCAGTTGTTTACCAGCAAATATCAACCTCTGCTGGTCCGGTGGGATCCCCTCCTT 2374 Query 29691 GTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 || || ||| || | |||||| | || | ||| ||||| ||| || || | ||| | Sbjct 2373 ATCCTG-AATCTTGGCCTTGACATTATCAATAGTATCAGACGATTCCACCTCCAAAGTGA 2315 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | ||||| || || |||||||||||||| |||||||| Sbjct 2314 TGGTTTTCCCTGTCAAGGTTTTAACAAAGATCTGCAT 2278 Score = 149 bits (164), Expect = 5e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || |||||||| | || || | ||| || || ||||| ||||||||||| ||||| || Sbjct 1820 CCGCCCCTCAACCTGAGAACAAGATGGAGGGTTGATTCCTTTTGAATGTTGTAATCGGCC 1761 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| ||| || ||||| || || |||||| | ||||| || ||||| || || || Sbjct 1760 AAGGTACGACCGTCCTCGAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGG 1701 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || ||||||||||| | ||| || ||| | || | ||||||||| || ||| Sbjct 1700 ATCCCTTCTTTGTCTTGGATTTTCGCCTTAACATTATCGATAGTGTCAGAGCTCTCGACT 1641 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || ||||| || ||||| ||||| | || |||||||| |||||||| || Sbjct 1640 TCGAGAGTGATGGTTTTACCAGTAAGAGTCTTAACAAAGATCTGCATATT 1591 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || |||| ||| || || || || || |||||||||||||| || | || || Sbjct 2265 ACGAAGAACCAGATGGAGGGTAGACTCCTTCTGAATGTTATAATCAGCCAAAGTACGTCC 2206 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || || || || ||||||||| | ||||| || ||||| || || || || || || || Sbjct 2205 GTCCTCAAGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCTGGTGGGATTCCTTCCTT 2146 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||||| | ||| ||||| | || | || || ||| || || || | ||| || Sbjct 2145 ATCTTGGATCTTTGCCTTGACGTTGTCAATGGTATCCGAACTCTCAACCTCCAAAGTAAT 2086 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || || |||||||| |||||||||||||| Sbjct 2085 TGTTTTTCCTGTCAAGGTTTTCACAAATATCTGCAT 2050 >seq4675 Length=16269 Score = 149 bits (164), Expect = 5e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || |||||||| | || || | ||| || || ||||| ||||||||||| ||||| || Sbjct 15971 CCGCCCCTCAACCTGAGAACAAGATGGAGGGTTGATTCCTTTTGAATGTTGTAATCGGCC 15912 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| ||| || ||||| || || |||||| | ||||| || ||||| || || || Sbjct 15911 AAGGTACGACCGTCCTCGAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGG 15852 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || ||||||||||| | ||| || ||| | || | ||||||||| || ||| Sbjct 15851 ATCCCTTCTTTGTCTTGGATTTTCGCCTTAACATTATCGATAGTGTCAGAGCTCTCGACT 15792 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || ||||| || ||||| ||||| | || |||||||| |||||||| || Sbjct 15791 TCGAGAGTGATGGTTTTACCAGTAAGAGTCTTAACAAAGATCTGCATATT 15742 >seq1845 Length=6980 Score = 149 bits (164), Expect = 5e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||||||||| | || ||| | ||| || || ||||| ||||| ||||| ||||||||| Sbjct 3975 CCTCCCCTCAACCTCAACACAAGATGGAGAGTTGATTCCTTTTGGATGTTGTAATCCGCA 4034 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| | ||| ||||| || ||||||||| | || | |||||||| || || || Sbjct 4035 AGGGTCCTGCCATCCTCGAGCTGCTTGCCAGCAAAGATAAGCCTTTGCTGGTCTGGGGGG 4094 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || |||||||| | ||| |||||| | || | ||||| || || || Sbjct 4095 ATCCCTTCCTTGTCTTGGATTTTCGCCTTGACATTATCGATTGTGTCGGAGCTCTCAACC 4154 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || || |||||||| | ||| |||||||| |||||||| Sbjct 4155 TCTAGAGTGATGGTCTTGCCAGTGAGGGTCTTAACAAAGATCTGCAT 4201 >seq16006 Length=16259 Score = 143 bits (158), Expect = 2e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || |||||||| | ||||||||||||||| || || ||||| || || || || || || Sbjct 13489 CCACCCCTCAACCTCAGCACCAAATGAAGGGTAGACTCTTTCTGGATATTGTAGTCTGCT 13430 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || ||| ||||| ||||| || ||| | || | |||||||| || ||||| Sbjct 13429 AGAGTACGCCCATCTTCGAGCTGTTTTCCTGCAAAGATAAGCCTTTGCTGGTCTGGCGGG 13370 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || |||||||| || || ||| || | ||||| | || | || |||||| ||| || Sbjct 13369 ATCCCCTCTTTATCCTG-AATCTTAGCCTTGACGTTGTCAATCGTATCAGAACTTTCAAC 13311 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | ||| || ||||| || || |||||||| |||||||||||||| Sbjct 13310 CTCTAAAGTGATGGTTTTTCCTGTCAAGGTTTTCACAAATATCTGCAT 13263 Score = 104 bits (114), Expect = 2e-17 Identities = 162/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||||||||| | || ||| | ||| || || ||||| ||||| || || || || || Sbjct 13033 CCTCCCCTCAACCTCAACACAAGATGGAGAGTCGATTCCTTTTGGATATTGTAGTCTGCC 12974 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| | ||| || ||| || |||||| | ||||| || ||||| || || || Sbjct 12973 AAGGTCCTGCCATCCTCAAGTGCTT--CCAGCAAAGATCAACCTCTGCTGGTCTGGGGGG 12916 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || |||||||| | ||| || ||| | || | ||||||||| || ||| Sbjct 12915 ATCCCTTCCTTGTCTTGGATTTTAGCCTTAACATTATCGATAGTGTCAGAGCTCTCGACT 12856 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 ||||| || || || ||||| | || |||||||| || ||||| || Sbjct 12855 --CAGAGTGATGGTCTTACCAGTGAGAGTCTTAACAAAGATTTGCATATT 12808 >seq13411 Length=19963 Score = 141 bits (156), Expect = 7e-29 Identities = 166/222 (75%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 29569 AAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGA 29628 ||||| | ||||||||||| |||||||||||||| || || || || || | || | Sbjct 11479 AAACGTAAGACCAAATGAAGAGTGGATTCTTTTTGGATATTGTAGTCGGCTAATGTCCTG 11420 Query 29629 GAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCT 29688 || || ||||||||||| ||| | || || | ||| || || || || || || ||| Sbjct 11419 CCGTCTTCAAGTTGTTTGCCTGCAAAGATTAAACGTTGTTGGTCTGGTGGGATGCCTTCT 11360 Query 29689 TTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGT 29747 |||||||| ||| || | ||| ||| | || | ||||| || ||| ||||| | || Sbjct 11359 TTGTCTTG-AATCTTGGCTTTCACATTGTCGATTGTGTCGGAGGATTCGACTTCTAAGGT 11301 Query 29748 TATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 ||| |||||||| ||||||||||| || || ||||||||||| Sbjct 11300 TATTGTTTTGCCGGTTAAGGTTTTTACGAAGATCTGCATTTT 11259 >seq5340 Length=22833 Score = 141 bits (156), Expect = 7e-29 Identities = 166/222 (75%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 29569 AAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGA 29628 ||||| | ||||||||||| |||||||||||||| || || || || || | || | Sbjct 14272 AAACGTAAGACCAAATGAAGAGTGGATTCTTTTTGGATATTGTAGTCGGCTAATGTCCTG 14331 Query 29629 GAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCT 29688 || || ||||||||||| ||| | || || | ||| || || || || || || ||| Sbjct 14332 CCGTCTTCAAGTTGTTTGCCTGCAAAGATTAAACGTTGTTGGTCTGGTGGGATGCCTTCT 14391 Query 29689 TTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGT 29747 |||||||| ||| || | ||| ||| | || | ||||| || ||| ||||| | || Sbjct 14392 TTGTCTTG-AATCTTGGCTTTCACATTGTCGATTGTGTCGGAGGATTCGACTTCTAAGGT 14450 Query 29748 TATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 ||| |||||||| ||||||||||| || || ||||||||||| Sbjct 14451 TATTGTTTTGCCGGTTAAGGTTTTTACGAAGATCTGCATTTT 14492 >seq10926 Length=11099 Score = 125 bits (138), Expect = 6e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || |||||||| ||||| ||||| ||||| || || || || || ||||| || || || Sbjct 8028 CCACCCCTCAACCGCAGTACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCTGCC 8087 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || ||| ||||||||||| || ||| | || | |||||||| || || || Sbjct 8088 AAAGTACGCCCATCTTCGAGTTGTTTTCCTGCAAAGATAAGCCTTTGCTGGTCTGGTGGG 8147 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || ||||| || || ||| || | |||||| | || | || |||||| ||| || Sbjct 8148 ATTCCTTCTTTATCCTG-AATCTTAGCCTTGACATTGTCAATCGTATCAGAACTTTCAAC 8206 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | ||| || ||||| || || || || || ||||| |||||||| Sbjct 8207 CTCTAAAGTGATTGTTTTTCCGGTCAACGTCTTGACAAAAATCTGCAT 8254 Score = 114 bits (126), Expect = 1e-20 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||||||||| | |||||| | ||| || || ||||| ||||| ||||| ||||| || Sbjct 8710 CCTCCCCTCAACCTCAGCACAAGATGGAGGGTTGATTCCTTTTGGATGTTGTAATCTGCC 8769 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| || || ||||| || ||||||||| | ||||| || || || || || || Sbjct 8770 AAGGTACGCCCGTCCTCGAGCTGCTTGCCAGCAAAGATCAACCTCTGTTGGTCTGGTGGG 8829 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || ||||| || | ||| |||||| | || | || || || || || Sbjct 8830 ATCCCTTCCTTGTCCTGGATTTTCGCCTTGACATTATCGATGGTATCTGAGCTCTCGACC 8889 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || ||||| ||||||| | || | || || ||||| |||||||| || Sbjct 8890 TCGAGAGTGATAGTTT--ACCGTAAGAGTCTTCACAAAGATCTGCATATT 8937 >seq5280 Length=29361 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||||||||| | |||||| | ||| || || ||||| ||||| || || || || || Sbjct 6542 CCTCCCCTCAACCTCAGCACAAGATGGAGGGTCGATTCCTTTTGGATATTGTAGTCTGCC 6483 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || || || || || ||| | || | || ||||| || || || Sbjct 6482 AATGTGCGACCATCCTCAAGCTGCTTTCCGGCAAAGATGAGCCTCTGCTGGTCTGGGGGG 6423 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || |||||||| | ||| || ||| | || | || || || || ||| Sbjct 6422 ATCCCTTCCTTGTCTTGGATTTTCGCCTTAACATTATCGATGGTATCTGAGCTCTCGACT 6363 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 |||||||| || || || ||||| | ||||||||||| |||||||| || Sbjct 6362 TCAAGAGTGATGGTCTTACCAGTGAGAGTTTTAACAAAGATCTGCATATT 6313 >seq14670 Length=61898 Score = 114 bits (126), Expect = 1e-20 Identities = 113/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || ||||| | || || | ||||||||| ||||| ||||| || || ||||| || Sbjct 31899 TCCACCTCTCAATCTCAAAACGAGATGAAGCGTCGATTCCTTTTGGATATTGTAATCAGC 31958 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || || | ||| || | |||||| |||||| ||||||||||||| ||||| ||||| Sbjct 31959 AAGTGTTCTTCCATCTTCTAATTGTTTCCCAGCAAATATCAATCTTTGTTGATCAGGCGG 32018 Query 29679 AATACCCTCTTTGTCTTGTAATTTTT 29704 ||| ||||||||||| | || |||| Sbjct 32019 AATTCCCTCTTTGTCCTAAAAATTTT 32044 >seq6802 Length=18417 Score = 114 bits (126), Expect = 1e-20 Identities = 113/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || ||||| | || || | ||||||||| ||||| ||||| || || ||||| || Sbjct 11285 TCCACCTCTCAATCTCAAAACGAGATGAAGCGTCGATTCCTTTTGGATATTGTAATCAGC 11226 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || || | ||| || | |||||| |||||| ||||||||||||| ||||| ||||| Sbjct 11225 AAGTGTTCTTCCATCTTCTAATTGTTTCCCAGCAAATATCAATCTTTGTTGATCAGGCGG 11166 Query 29679 AATACCCTCTTTGTCTTGTAATTTTT 29704 ||| ||||||||||| | || |||| Sbjct 11165 AATTCCCTCTTTGTCCTAAAAATTTT 11140 >seq6637 Length=15695 Score = 114 bits (126), Expect = 1e-20 Identities = 113/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || ||||| | || || | ||||||||| ||||| ||||| || || ||||| || Sbjct 3997 TCCACCTCTCAATCTCAAAACGAGATGAAGCGTCGATTCCTTTTGGATATTGTAATCAGC 3938 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || || | ||| || | |||||| |||||| ||||||||||||| ||||| ||||| Sbjct 3937 AAGTGTTCTTCCATCTTCTAATTGTTTCCCAGCAAATATCAATCTTTGTTGATCAGGCGG 3878 Query 29679 AATACCCTCTTTGTCTTGTAATTTTT 29704 ||| ||||||||||| | || |||| Sbjct 3877 AATTCCCTCTTTGTCCTAAAAATTTT 3852 >seq8889 Length=9065 Score = 113 bits (124), Expect = 3e-20 Identities = 158/218 (72%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| ||||| | ||||| || || || || |||||||| ||||| |||| || || Sbjct 2286 ACGGAGCACAAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCAGCAAGTGTCCGTCC 2227 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || | |||||| || ||| | || | || ||||| || || || || ||||| || Sbjct 2226 ATCTTCCAATTGTTTACCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATCCCCTCCTT 2167 Query 29691 GTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 || || ||| || | |||||| | || | ||| |||||| || || || | ||| | Sbjct 2166 ATCCTG-AATCTTGGCCTTGACATTGTCAATAGTATCAGAAGACTCCACCTCCAAAGTGA 2108 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 | ||||| || || || ||||||||||| ||||||||| Sbjct 2107 TGGTTTTTCCTGTCAAAGTTTTAACAAA-ATCTGCATT 2071 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || |||| ||| || || || || || |||||||||||||| || | || || Sbjct 2059 ACGAAGAACCAGATGGAGGGTAGACTCCTTCTGAATGTTATAATCGGCCAAAGTACGTCC 2000 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || |||||||||||| | ||||| || ||||| || || ||||| || || || Sbjct 1999 ATCCTCAAGCTGTTTGCCAGCAAAAATCAACCTCTGCTGGTCTGGTGGAATTCCTTCCTT 1940 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||||| | || ||||| | || | || ||||| || || || | ||| || Sbjct 1939 ATCTTGGATCTTAGCCTTGACGTTGTCAATGGTATCAGAGCTCTCAACCTCCAAAGTGAT 1880 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || || || || || ||||| |||||||| Sbjct 1879 GGTTTTTCCCGTCAATGTCTTCACAAAGATCTGCAT 1844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385124950705575