Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Conyza_20canadensis_20[genbank_20GCA_5F000775935.1_202014-11-13]
20,075 sequences; 326,165,195 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq4586 161 8e-35
seq16550 150 1e-31
seq8384 150 1e-31
seq7910 150 1e-31
seq4675 149 5e-31
seq1845 149 5e-31
seq16006 143 2e-29
seq13411 141 7e-29
seq5340 141 7e-29
seq10926 125 6e-24
seq5280 122 7e-23
seq14670 114 1e-20
seq6802 114 1e-20
seq6637 114 1e-20
seq8889 113 3e-20
>seq4586
Length=18721
Score = 161 bits (178), Expect = 8e-35
Identities = 179/236 (76%), Gaps = 2/236 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| ||||||||||| |||||||| ||||| || ||||| || |||||||| || || |||
Sbjct 13881 CCACCCCTCAAACGAAGCACCAAGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCAGCA 13940
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| ||| || || || ||||| || ||| | |||| || |||||||| || |||
Sbjct 13941 AGGGTACGACCGTCCTCAAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGATCTGGGGGA 14000
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| || ||||||||||| ||| || | || ||| | || | |||||||| || ||
Sbjct 14001 ATCCCTTCTTTGTCTTG-AATCTTGGCCTTAACATTGTCAATGGTGTCAGAGCTCTCCAC 14059
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTAAAAC 29794
|| ||||| || || || ||||| || ||||| |||||||||||||| | ||||
Sbjct 14060 CTCGAGAGTGATGGTCTTTCCAGTCAAAGTTTTCACAAATATCTGCATCTGTAAAC 14115
>seq16550
Length=20979
Score = 150 bits (166), Expect = 1e-31
Identities = 172/230 (75%), Gaps = 1/230 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
||||||||||| | || ||| | ||| || || ||||| |||||||| || || || ||
Sbjct 18360 CCTCCCCTCAACCTCAACACAAGATGGAGGGTTGATTCCTTTTGAATATTGTAGTCTGCC 18419
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| | ||| ||||| || || |||||| | ||||| ||||||||||| || ||
Sbjct 18420 AGGGTCCTGCCATCCTCGAGCTGCTTTCCAGCAAAGATCAACCTTTGCTGATCTGGGGGG 18479
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
||||| ||||||||||| ||||| | | ||| | || | ||||||||| || |||
Sbjct 18480 ATACCTTCTTTGTCTTG-GATTTTGGCCTTACATTATCGATAGTGTCAGAGCTCTCGACT 18538
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
|| ||||| || || || || || | || |||||||| |||||||| ||
Sbjct 18539 TCGAGAGTGATGGTCTTACCCGTGAGAGTCTTAACAAAGATCTGCATATT 18588
Score = 125 bits (138), Expect = 6e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| |||||||| ||||| ||||| ||||| || || || || || ||||| || || ||
Sbjct 17448 CCACCCCTCAACCGCAGTACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCTGCC 17507
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || || ||| ||||||||||| || ||| | || | |||||||| || || ||
Sbjct 17508 AAAGTACGCCCATCTTCGAGTTGTTTTCCTGCAAAGATAAGCCTTTGCTGGTCTGGTGGG 17567
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| || ||||| || || ||| || | |||||| | || | || |||||| ||| ||
Sbjct 17568 ATTCCTTCTTTATCCTG-AATCTTAGCCTTGACATTGTCAATCGTATCAGAACTTTCAAC 17626
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| | ||| || ||||| || || || || || ||||| ||||||||
Sbjct 17627 CTCTAAAGTGATTGTTTTTCCGGTCAACGTCTTGACAAAAATCTGCAT 17674
Score = 123 bits (136), Expect = 2e-23
Identities = 159/217 (73%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || |||||||| || || || || ||||||||||| ||||| |||| ||| ||
Sbjct 17915 ACGAAGAACCAAATGCAGAGTCGACTCCTTTTGAATGTTGTAATCAGCAAGGGTACGCCC 17974
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || || || || |||||| | |||| || || || || || || || || || ||
Sbjct 17975 ATCCTCAAGCTGCTTTCCAGCAAAGATCAGCCTCTGTTGGTCTGGTGGGATCCCTTCCTT 18034
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
||||| ||| |||| |||||| | || | ||| || || ||| || || | ||| |
Sbjct 18035 ATCTTG-AATCTTTGCCTTGACATTATCAATAGTATCCGAGCTTTCAACCTCCAAAGTGA 18093
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| ||||| || || || ||||| ||||| ||||||||
Sbjct 18094 TGGTTTTCCCTGTCAAAGTTTTTACAAAAATCTGCAT 18130
Score = 122 bits (134), Expect = 7e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| |||||||| | |||||| | ||| || || || || || |||||||||||||| ||
Sbjct 17676 CCACCCCTCAACCTCAGCACAAGATGGAGTGTAGACTCCTTCTGAATGTTATAATCTGCC 17735
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | ||| || || ||||| || ||| | || | || |||||||| || ||
Sbjct 17736 AACGTCCTGCCATCTTCAAGCTGTTTACCTGCAAAGATAAGCCTCTGCTGATCTGGTGGG 17795
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| ||||| || ||||| | ||| |||||| | || | || || || || |||
Sbjct 17796 ATCCCCTCCTTATCTTGGATTTTGGCCTTGACATTATCGATGGTATCTGAGCTCTCGACT 17855
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| | ||| || || || ||||| |||||||| ||||| ||||||||
Sbjct 17856 TCCAAAGTGATTGTCTTTCCAGTCAAGGTTTTCACAAAGATCTGCAT 17902
Score = 118 bits (130), Expect = 8e-22
Identities = 158/217 (73%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || ||||| || || || ||||| || || ||||||||||| || | ||| |
Sbjct 18143 ACGAAGGACCAAGTGCAGAGTTGATTCCTTCTGGATGTTATAATCTGCCAAGGTCCTGCC 18202
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| |||||||| ||||||||| | |||||||| ||||| || || || || || || ||
Sbjct 18203 ATCCTCGAGTTGCTTGCCAGCAAAAATCAATCTCTGCTGGTCTGGTGGGATCCCTTCCTT 18262
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
||||| ||| || | || ||| | || | ||||| || ||| || || | ||| |
Sbjct 18263 ATCTTG-AATCTTCGCCTTAACATTATCGATTGTGTCTGAGCTTTCGACCTCCAAAGTAA 18321
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| || || || || || || || ||||| ||||||||
Sbjct 18322 TGGTCTTTCCTGTCAACGTCTTGACAAAGATCTGCAT 18358
>seq8384
Length=24589
Score = 150 bits (166), Expect = 1e-31
Identities = 165/217 (76%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| ||||| | ||||| ||||| || || |||||||| ||||| |||| || | |
Sbjct 4257 ACGGAGCACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCGGCAAGCGTCCTACC 4198
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || |||||||| |||||| ||||||| || ||||| ||||| || || ||||| ||
Sbjct 4197 ATCTTCCAGTTGTTTACCAGCAAATATCAACCTCTGCTGGTCCGGTGGGATCCCCTCCTT 4138
Query 29691 GTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
|| || ||| || | |||||| | || | ||| ||||| ||| || || | ||| |
Sbjct 4137 ATCCTG-AATCTTGGCCTTGACATTATCAATAGTATCAGACGATTCCACCTCCAAAGTGA 4079
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| ||||| || || |||||||||||||| ||||||||
Sbjct 4078 TGGTTTTCCCTGTCAAGGTTTTAACAAAGATCTGCAT 4042
Score = 149 bits (164), Expect = 5e-31
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| |||||||| | || || | ||| || || ||||| ||||||||||| ||||| ||
Sbjct 3584 CCGCCCCTCAACCTGAGAACAAGATGGAGGGTTGATTCCTTTTGAATGTTGTAATCGGCC 3525
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| ||| || ||||| || || |||||| | ||||| || ||||| || || ||
Sbjct 3524 AAGGTACGACCGTCCTCGAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGG 3465
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || ||||||||||| | ||| || ||| | || | ||||||||| || |||
Sbjct 3464 ATCCCTTCTTTGTCTTGGATTTTCGCCTTAACATTATCGATAGTGTCAGAGCTCTCGACT 3405
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
|| ||||| || ||||| ||||| | || |||||||| |||||||| ||
Sbjct 3404 TCGAGAGTGATGGTTTTACCAGTAAGAGTCTTAACAAAGATCTGCATATT 3355
Score = 114 bits (126), Expect = 1e-20
Identities = 155/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || |||| ||| || || || || || |||||||||||||| || | || ||
Sbjct 4029 ACGAAGAACCAGATGGAGGGTAGACTCCTTCTGAATGTTATAATCAGCCAAAGTACGTCC 3970
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
|| || || || ||||||||| | ||||| || ||||| || || || || || || ||
Sbjct 3969 GTCCTCAAGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCTGGTGGGATTCCTTCCTT 3910
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
||||| | ||| ||||| | || | || || ||| || || || | ||| ||
Sbjct 3909 ATCTTGGATCTTTGCCTTGACGTTGTCAATGGTATCCGAACTCTCAACCTCCAAAGTAAT 3850
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||| || || |||||||| ||||||||||||||
Sbjct 3849 TGTTTTTCCTGTCAAGGTTTTCACAAATATCTGCAT 3814
>seq7910
Length=9655
Score = 150 bits (166), Expect = 1e-31
Identities = 165/217 (76%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| ||||| | ||||| ||||| || || |||||||| ||||| |||| || | |
Sbjct 2493 ACGGAGCACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCGGCAAGCGTCCTACC 2434
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || |||||||| |||||| ||||||| || ||||| ||||| || || ||||| ||
Sbjct 2433 ATCTTCCAGTTGTTTACCAGCAAATATCAACCTCTGCTGGTCCGGTGGGATCCCCTCCTT 2374
Query 29691 GTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
|| || ||| || | |||||| | || | ||| ||||| ||| || || | ||| |
Sbjct 2373 ATCCTG-AATCTTGGCCTTGACATTATCAATAGTATCAGACGATTCCACCTCCAAAGTGA 2315
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| ||||| || || |||||||||||||| ||||||||
Sbjct 2314 TGGTTTTCCCTGTCAAGGTTTTAACAAAGATCTGCAT 2278
Score = 149 bits (164), Expect = 5e-31
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| |||||||| | || || | ||| || || ||||| ||||||||||| ||||| ||
Sbjct 1820 CCGCCCCTCAACCTGAGAACAAGATGGAGGGTTGATTCCTTTTGAATGTTGTAATCGGCC 1761
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| ||| || ||||| || || |||||| | ||||| || ||||| || || ||
Sbjct 1760 AAGGTACGACCGTCCTCGAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGG 1701
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || ||||||||||| | ||| || ||| | || | ||||||||| || |||
Sbjct 1700 ATCCCTTCTTTGTCTTGGATTTTCGCCTTAACATTATCGATAGTGTCAGAGCTCTCGACT 1641
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
|| ||||| || ||||| ||||| | || |||||||| |||||||| ||
Sbjct 1640 TCGAGAGTGATGGTTTTACCAGTAAGAGTCTTAACAAAGATCTGCATATT 1591
Score = 114 bits (126), Expect = 1e-20
Identities = 155/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || |||| ||| || || || || || |||||||||||||| || | || ||
Sbjct 2265 ACGAAGAACCAGATGGAGGGTAGACTCCTTCTGAATGTTATAATCAGCCAAAGTACGTCC 2206
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
|| || || || ||||||||| | ||||| || ||||| || || || || || || ||
Sbjct 2205 GTCCTCAAGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCTGGTGGGATTCCTTCCTT 2146
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
||||| | ||| ||||| | || | || || ||| || || || | ||| ||
Sbjct 2145 ATCTTGGATCTTTGCCTTGACGTTGTCAATGGTATCCGAACTCTCAACCTCCAAAGTAAT 2086
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||| || || |||||||| ||||||||||||||
Sbjct 2085 TGTTTTTCCTGTCAAGGTTTTCACAAATATCTGCAT 2050
>seq4675
Length=16269
Score = 149 bits (164), Expect = 5e-31
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| |||||||| | || || | ||| || || ||||| ||||||||||| ||||| ||
Sbjct 15971 CCGCCCCTCAACCTGAGAACAAGATGGAGGGTTGATTCCTTTTGAATGTTGTAATCGGCC 15912
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| ||| || ||||| || || |||||| | ||||| || ||||| || || ||
Sbjct 15911 AAGGTACGACCGTCCTCGAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGG 15852
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || ||||||||||| | ||| || ||| | || | ||||||||| || |||
Sbjct 15851 ATCCCTTCTTTGTCTTGGATTTTCGCCTTAACATTATCGATAGTGTCAGAGCTCTCGACT 15792
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
|| ||||| || ||||| ||||| | || |||||||| |||||||| ||
Sbjct 15791 TCGAGAGTGATGGTTTTACCAGTAAGAGTCTTAACAAAGATCTGCATATT 15742
>seq1845
Length=6980
Score = 149 bits (164), Expect = 5e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
||||||||||| | || ||| | ||| || || ||||| ||||| ||||| |||||||||
Sbjct 3975 CCTCCCCTCAACCTCAACACAAGATGGAGAGTTGATTCCTTTTGGATGTTGTAATCCGCA 4034
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| | ||| ||||| || ||||||||| | || | |||||||| || || ||
Sbjct 4035 AGGGTCCTGCCATCCTCGAGCTGCTTGCCAGCAAAGATAAGCCTTTGCTGGTCTGGGGGG 4094
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || || |||||||| | ||| |||||| | || | ||||| || || ||
Sbjct 4095 ATCCCTTCCTTGTCTTGGATTTTCGCCTTGACATTATCGATTGTGTCGGAGCTCTCAACC 4154
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| ||||| || || |||||||| | ||| |||||||| ||||||||
Sbjct 4155 TCTAGAGTGATGGTCTTGCCAGTGAGGGTCTTAACAAAGATCTGCAT 4201
>seq16006
Length=16259
Score = 143 bits (158), Expect = 2e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| |||||||| | ||||||||||||||| || || ||||| || || || || || ||
Sbjct 13489 CCACCCCTCAACCTCAGCACCAAATGAAGGGTAGACTCTTTCTGGATATTGTAGTCTGCT 13430
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || || ||| ||||| ||||| || ||| | || | |||||||| || |||||
Sbjct 13429 AGAGTACGCCCATCTTCGAGCTGTTTTCCTGCAAAGATAAGCCTTTGCTGGTCTGGCGGG 13370
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| |||||||| || || ||| || | ||||| | || | || |||||| ||| ||
Sbjct 13369 ATCCCCTCTTTATCCTG-AATCTTAGCCTTGACGTTGTCAATCGTATCAGAACTTTCAAC 13311
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| | ||| || ||||| || || |||||||| ||||||||||||||
Sbjct 13310 CTCTAAAGTGATGGTTTTTCCTGTCAAGGTTTTCACAAATATCTGCAT 13263
Score = 104 bits (114), Expect = 2e-17
Identities = 162/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
||||||||||| | || ||| | ||| || || ||||| ||||| || || || || ||
Sbjct 13033 CCTCCCCTCAACCTCAACACAAGATGGAGAGTCGATTCCTTTTGGATATTGTAGTCTGCC 12974
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| | ||| || ||| || |||||| | ||||| || ||||| || || ||
Sbjct 12973 AAGGTCCTGCCATCCTCAAGTGCTT--CCAGCAAAGATCAACCTCTGCTGGTCTGGGGGG 12916
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || || |||||||| | ||| || ||| | || | ||||||||| || |||
Sbjct 12915 ATCCCTTCCTTGTCTTGGATTTTAGCCTTAACATTATCGATAGTGTCAGAGCTCTCGACT 12856
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
||||| || || || ||||| | || |||||||| || ||||| ||
Sbjct 12855 --CAGAGTGATGGTCTTACCAGTGAGAGTCTTAACAAAGATTTGCATATT 12808
>seq13411
Length=19963
Score = 141 bits (156), Expect = 7e-29
Identities = 166/222 (75%), Gaps = 2/222 (1%)
Strand=Plus/Minus
Query 29569 AAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGA 29628
||||| | ||||||||||| |||||||||||||| || || || || || | || |
Sbjct 11479 AAACGTAAGACCAAATGAAGAGTGGATTCTTTTTGGATATTGTAGTCGGCTAATGTCCTG 11420
Query 29629 GAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCT 29688
|| || ||||||||||| ||| | || || | ||| || || || || || || |||
Sbjct 11419 CCGTCTTCAAGTTGTTTGCCTGCAAAGATTAAACGTTGTTGGTCTGGTGGGATGCCTTCT 11360
Query 29689 TTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGT 29747
|||||||| ||| || | ||| ||| | || | ||||| || ||| ||||| | ||
Sbjct 11359 TTGTCTTG-AATCTTGGCTTTCACATTGTCGATTGTGTCGGAGGATTCGACTTCTAAGGT 11301
Query 29748 TATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
||| |||||||| ||||||||||| || || |||||||||||
Sbjct 11300 TATTGTTTTGCCGGTTAAGGTTTTTACGAAGATCTGCATTTT 11259
>seq5340
Length=22833
Score = 141 bits (156), Expect = 7e-29
Identities = 166/222 (75%), Gaps = 2/222 (1%)
Strand=Plus/Plus
Query 29569 AAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGA 29628
||||| | ||||||||||| |||||||||||||| || || || || || | || |
Sbjct 14272 AAACGTAAGACCAAATGAAGAGTGGATTCTTTTTGGATATTGTAGTCGGCTAATGTCCTG 14331
Query 29629 GAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCT 29688
|| || ||||||||||| ||| | || || | ||| || || || || || || |||
Sbjct 14332 CCGTCTTCAAGTTGTTTGCCTGCAAAGATTAAACGTTGTTGGTCTGGTGGGATGCCTTCT 14391
Query 29689 TTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGT 29747
|||||||| ||| || | ||| ||| | || | ||||| || ||| ||||| | ||
Sbjct 14392 TTGTCTTG-AATCTTGGCTTTCACATTGTCGATTGTGTCGGAGGATTCGACTTCTAAGGT 14450
Query 29748 TATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
||| |||||||| ||||||||||| || || |||||||||||
Sbjct 14451 TATTGTTTTGCCGGTTAAGGTTTTTACGAAGATCTGCATTTT 14492
>seq10926
Length=11099
Score = 125 bits (138), Expect = 6e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| |||||||| ||||| ||||| ||||| || || || || || ||||| || || ||
Sbjct 8028 CCACCCCTCAACCGCAGTACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCTGCC 8087
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || || ||| ||||||||||| || ||| | || | |||||||| || || ||
Sbjct 8088 AAAGTACGCCCATCTTCGAGTTGTTTTCCTGCAAAGATAAGCCTTTGCTGGTCTGGTGGG 8147
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| || ||||| || || ||| || | |||||| | || | || |||||| ||| ||
Sbjct 8148 ATTCCTTCTTTATCCTG-AATCTTAGCCTTGACATTGTCAATCGTATCAGAACTTTCAAC 8206
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| | ||| || ||||| || || || || || ||||| ||||||||
Sbjct 8207 CTCTAAAGTGATTGTTTTTCCGGTCAACGTCTTGACAAAAATCTGCAT 8254
Score = 114 bits (126), Expect = 1e-20
Identities = 164/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
||||||||||| | |||||| | ||| || || ||||| ||||| ||||| ||||| ||
Sbjct 8710 CCTCCCCTCAACCTCAGCACAAGATGGAGGGTTGATTCCTTTTGGATGTTGTAATCTGCC 8769
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| || || ||||| || ||||||||| | ||||| || || || || || ||
Sbjct 8770 AAGGTACGCCCGTCCTCGAGCTGCTTGCCAGCAAAGATCAACCTCTGTTGGTCTGGTGGG 8829
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || || ||||| || | ||| |||||| | || | || || || || ||
Sbjct 8830 ATCCCTTCCTTGTCCTGGATTTTCGCCTTGACATTATCGATGGTATCTGAGCTCTCGACC 8889
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
|| ||||| ||||||| | || | || || ||||| |||||||| ||
Sbjct 8890 TCGAGAGTGATAGTTT--ACCGTAAGAGTCTTCACAAAGATCTGCATATT 8937
>seq5280
Length=29361
Score = 122 bits (134), Expect = 7e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
||||||||||| | |||||| | ||| || || ||||| ||||| || || || || ||
Sbjct 6542 CCTCCCCTCAACCTCAGCACAAGATGGAGGGTCGATTCCTTTTGGATATTGTAGTCTGCC 6483
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| |||||| ||| || || || || || ||| | || | || ||||| || || ||
Sbjct 6482 AATGTGCGACCATCCTCAAGCTGCTTTCCGGCAAAGATGAGCCTCTGCTGGTCTGGGGGG 6423
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || || |||||||| | ||| || ||| | || | || || || || |||
Sbjct 6422 ATCCCTTCCTTGTCTTGGATTTTCGCCTTAACATTATCGATGGTATCTGAGCTCTCGACT 6363
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
|||||||| || || || ||||| | ||||||||||| |||||||| ||
Sbjct 6362 TCAAGAGTGATGGTCTTACCAGTGAGAGTTTTAACAAAGATCTGCATATT 6313
>seq14670
Length=61898
Score = 114 bits (126), Expect = 1e-20
Identities = 113/146 (77%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618
||| || ||||| | || || | ||||||||| ||||| ||||| || || ||||| ||
Sbjct 31899 TCCACCTCTCAATCTCAAAACGAGATGAAGCGTCGATTCCTTTTGGATATTGTAATCAGC 31958
Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678
|| || | ||| || | |||||| |||||| ||||||||||||| ||||| |||||
Sbjct 31959 AAGTGTTCTTCCATCTTCTAATTGTTTCCCAGCAAATATCAATCTTTGTTGATCAGGCGG 32018
Query 29679 AATACCCTCTTTGTCTTGTAATTTTT 29704
||| ||||||||||| | || ||||
Sbjct 32019 AATTCCCTCTTTGTCCTAAAAATTTT 32044
>seq6802
Length=18417
Score = 114 bits (126), Expect = 1e-20
Identities = 113/146 (77%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618
||| || ||||| | || || | ||||||||| ||||| ||||| || || ||||| ||
Sbjct 11285 TCCACCTCTCAATCTCAAAACGAGATGAAGCGTCGATTCCTTTTGGATATTGTAATCAGC 11226
Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678
|| || | ||| || | |||||| |||||| ||||||||||||| ||||| |||||
Sbjct 11225 AAGTGTTCTTCCATCTTCTAATTGTTTCCCAGCAAATATCAATCTTTGTTGATCAGGCGG 11166
Query 29679 AATACCCTCTTTGTCTTGTAATTTTT 29704
||| ||||||||||| | || ||||
Sbjct 11165 AATTCCCTCTTTGTCCTAAAAATTTT 11140
>seq6637
Length=15695
Score = 114 bits (126), Expect = 1e-20
Identities = 113/146 (77%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618
||| || ||||| | || || | ||||||||| ||||| ||||| || || ||||| ||
Sbjct 3997 TCCACCTCTCAATCTCAAAACGAGATGAAGCGTCGATTCCTTTTGGATATTGTAATCAGC 3938
Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678
|| || | ||| || | |||||| |||||| ||||||||||||| ||||| |||||
Sbjct 3937 AAGTGTTCTTCCATCTTCTAATTGTTTCCCAGCAAATATCAATCTTTGTTGATCAGGCGG 3878
Query 29679 AATACCCTCTTTGTCTTGTAATTTTT 29704
||| ||||||||||| | || ||||
Sbjct 3877 AATTCCCTCTTTGTCCTAAAAATTTT 3852
>seq8889
Length=9065
Score = 113 bits (124), Expect = 3e-20
Identities = 158/218 (72%), Gaps = 3/218 (1%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| ||||| | ||||| || || || || |||||||| ||||| |||| || ||
Sbjct 2286 ACGGAGCACAAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCAGCAAGTGTCCGTCC 2227
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || | |||||| || ||| | || | || ||||| || || || || ||||| ||
Sbjct 2226 ATCTTCCAATTGTTTACCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATCCCCTCCTT 2167
Query 29691 GTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
|| || ||| || | |||||| | || | ||| |||||| || || || | ||| |
Sbjct 2166 ATCCTG-AATCTTGGCCTTGACATTGTCAATAGTATCAGAAGACTCCACCTCCAAAGTGA 2108
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
| ||||| || || || ||||||||||| |||||||||
Sbjct 2107 TGGTTTTTCCTGTCAAAGTTTTAACAAA-ATCTGCATT 2071
Score = 111 bits (122), Expect = 1e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || |||| ||| || || || || || |||||||||||||| || | || ||
Sbjct 2059 ACGAAGAACCAGATGGAGGGTAGACTCCTTCTGAATGTTATAATCGGCCAAAGTACGTCC 2000
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || || |||||||||||| | ||||| || ||||| || || ||||| || || ||
Sbjct 1999 ATCCTCAAGCTGTTTGCCAGCAAAAATCAACCTCTGCTGGTCTGGTGGAATTCCTTCCTT 1940
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
||||| | || ||||| | || | || ||||| || || || | ||| ||
Sbjct 1939 ATCTTGGATCTTAGCCTTGACGTTGTCAATGGTATCAGAGCTCTCAACCTCCAAAGTGAT 1880
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||| || || || || || ||||| ||||||||
Sbjct 1879 GGTTTTTCCCGTCAATGTCTTCACAAAGATCTGCAT 1844
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385124950705575
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |