Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Conyza_20canadensis_20[genbank_20GCA_5F000775935.1_202014-11-13]
20,075 sequences; 326,165,195 total letters
Query= NC_023584.1
Length=170438
Score E
Sequences producing significant alignments: (Bits) Value
seq20014 607 9e-169
seq2978 518 4e-142
seq20016 515 4e-141
seq2990 390 1e-103
seq2982 183 3e-41
seq15940 172 6e-38
seq8649 136 4e-27
seq7755 113 5e-20
seq12569 104 3e-17
seq13577 96.9 4e-15
seq9963 82.4 8e-11
>seq20014
Length=5322
Score = 607 bits (672), Expect = 9e-169
Identities = 731/989 (74%), Gaps = 4/989 (0%)
Strand=Plus/Minus
Query 157051 TTCTGCGAGTGGGTAACTTCCACCAACAACCGTTTGTATGTTGGTTGGTTCGGTGTGCTT 157110
||||| | ||| |||| |||| | |||||| | || |||| ||||| || || |
Sbjct 1920 TTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGCGTTTTG 1861
Query 157111 ATGATTCCAACATTGCTTGCAGCAACTATCTGC-TTCATTGTTGCATTCGTAGCAGCACC 157169
||||| || || || | | |||||| |||| || ||| | || ||| | || || ||
Sbjct 1860 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTCC 1802
Query 157170 TCCCGTTGATATCGACGGTATTCGCGAACCAGTTGCTGGTTCTCTCATGTATGGCAACAA 157229
||| || ||||| || |||||||| ||||| ||| |||| ||||| | ||||| |||||
Sbjct 1801 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAA 1742
Query 157230 CATCATCTCTGGTGCAGTTGTTCCTTCTTCAAACGCAATCGGTCTTCACTTCTACCCCAT 157289
|| || || ||||| || ||||| |||| || || ||| | || || ||||| ||
Sbjct 1741 TATTATTTCGGGTGCCATTATTCCTACTTCTGCAGCTATAGGTTTGCATTTTTACCCAAT 1682
Query 157290 CTGGGAAGCAGCATCACTTGATGAGTGGCTTTACAACGGTGGTCCTTTCCAACTGGTAGT 157349
|||||||||||||| ||||||| ||| | ||||| |||||||||| |||| | ||
Sbjct 1681 ATGGGAAGCAGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAACTAATTGT 1622
Query 157350 CTTTCACTTCCTGATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTTTCTTACCG 157409
| |||||| | | || | | || ||||| ||||||||||||||| || |||
Sbjct 1621 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCG 1562
Query 157410 TTTAGGTATGCGCCCCTGGATCTGTGTTGCCTACTCGGCACCAGTCGCTGCTGCGAGTGC 157469
| | |||||||| || ||||| |||||| || || || || || || ||||||| |||
Sbjct 1561 TCTGGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGC 1502
Query 157470 AGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTAT 157529
|| ||| | |||| || | |||||||| || || |||| ||||||||| || ||
Sbjct 1501 TGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAAT 1442
Query 157530 CTCTGGTACTTTTAACTATATGCTCGTCTTCCAGGCAGAGCACAATATTCTTATGCATCC 157589
||||||||||| |||| ||| | || |||||||| |||||||| || |||||||| ||
Sbjct 1441 TTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCC 1382
Query 157590 GTTCCACATGCTCGGCGTTGCTGGGGTATTCGGTGGATCTTTGTTCTCTGCTATGCACGG 157649
|| |||||||| ||||| ||||| |||||||| || || | || ||||||||| ||
Sbjct 1381 ATTTCACATGCTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGG 1322
Query 157650 AAGTCTCGTTACTTCCTCGCTTGTTC-GTGAAACAACTGAAACAGAGTCACAGAACTATG 157708
| | || || || | | ||| || | ||||| || |||| || || ||| | |
Sbjct 1321 TTCTTTGGTAACCTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAACGAAG 1263
Query 157709 GTTACAAGTTCGGTCAAGAAGAAGAGACGTACAACATCGTTGCTGCACACGGTTACTTCG 157768
|||||| ||||||||||||||||| || || || ||||| || || |||||||| || |
Sbjct 1262 GTTACAGATTCGGTCAAGAAGAAGAAACTTATAATATCGTAGCCGCTCACGGTTATTTTG 1203
Query 157769 GTCGCCTGATCTTCCAATACGCTTCATTCAACAACAGCAGAAGTCTTCACTTCTTCCTCG 157828
| || ||||||||||||| ||| ||||||||| | | | || |||||||| |
Sbjct 1202 GCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACATTTCTTCCTAG 1143
Query 157829 CCGCATGGCCTGTTGTCGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCA 157888
| || |||||||| || || |||||||||||||| | || | ||||| ||||| ||||
Sbjct 1142 CTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCTTTCA 1083
Query 157889 ACCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACA 157948
|||| || |||||||| |||||||| || | ||||| |||| || ||||| | ||||
Sbjct 1082 ACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGCCGTGTAATTAACA 1023
Query 157949 CCTGGGCAGATGTCCTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACG 158008
| ||||| ||| || | ||||| ||| ||||||||||||||||||||||| ||||| |
Sbjct 1022 CTTGGGCTGATATCATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 963
Query 158009 CACACAACTTCCCACTGGATCTTGCTGCT 158037
| ||||| ||||| || || | ||||||
Sbjct 962 CTCACAATTTCCCTCTAGACTTAGCTGCT 934
>seq2978
Length=1535
Score = 518 bits (574), Expect = 4e-142
Identities = 669/907 (74%), Gaps = 15/907 (2%)
Strand=Plus/Plus
Query 157144 TTCATTGTTGCATTCGTAGCAG-CACCTCCCGTTGATATCGAC-GGTATT-CGCGAACC- 157199
|| ||| | || ||| | || | | ||||| || ||||| || |||||| || |||||
Sbjct 11 TTTATTATCGCCTTCATTGCTGACTCCTCCAGTAGATATTGATAGGTATTACGTGAACCT 70
Query 157200 AGTTG--CTGGTTCTCTCA--TGTATGGCAACAACATCATCTCTGGTGCAGTTGTTCCTT 157255
|||| |||| ||||| | | ||||| ||||| || || || ||||| || |||||
Sbjct 71 AGTTTTACTGGATCTCTTACTTTTATGG-AACAATATTATTTCGGGTGCCATTATTCCTA 129
Query 157256 CTTCAAACGCAATCGGTCTTCACTTCTACCCCATCTGGGAAG-CAGCATCACTTGA-TGA 157313
|||| || || ||| | || || ||||| || ||||||| ||||||| |||| |||
Sbjct 130 CTTCTGCAGCTATAGGTTTGCATTTTTACCCAATATGGGAAGGCAGCATCTGTTGAATGA 189
Query 157314 GTGGCTTTACAAC-GGTGGTCCTTTCCAACTGGTAGTCTTTCACTTCCTGATCGGCATCT 157372
||| | ||||| |||||||||| |||| | || | |||||| | | || |
Sbjct 190 ATGGTTATACAATAGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAG 249
Query 157373 ATGCCTATATGGGACGTGAGTGGGAACTTTCTTACCGTTTAGGTATGCGCCCCTGGATCT 157432
| || ||||| ||||||||||||||| || |||| | |||||||| || |||||
Sbjct 250 CTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGACCTTGGATTG 309
Query 157433 GTGTTGCCTACTCGGCACCAGTCGCTGCTGCGAGTGCAGTATTCCTCGTCTATCCTTTCG 157492
|||||| || || || || || || ||||||| ||| || ||| | |||| || | |
Sbjct 310 CTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTTGATCTACCCAATTG 369
Query 157493 GTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGC 157552
||||||| || || |||| ||||||||| || || ||||||||||| |||| |||
Sbjct 370 GTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATGA 429
Query 157553 TCGTCTTCCAGGCAGAGCACAATATTCTTATGCATCCGTTCCACATGCTCGGCGTTGCTG 157612
| || |||||||| |||||||| || |||||||| || || |||||||| ||||| ||||
Sbjct 430 TTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGCTAGGCGTAGCTG 489
Query 157613 GGGTATTCGGTGGATCTTTGTTCTCTGCTATGCACGGAAGTCTCGTTACTTCCTCGCTTG 157672
| |||||||| || || | || ||||||||| || | | || || || | | |||
Sbjct 490 GTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGTTCTTTGGTAACCTC-TAGTTTG 548
Query 157673 TTC-GTGAAACAACTGAAACAGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAA 157731
|| | ||||| || |||| || || ||| | ||||||| |||||||||||||||
Sbjct 549 ATCAGGGAAACCACAGAAAATGAATCTGCTAACGAAGGTTACAGATTCGGTCAAGAAGAA 608
Query 157732 GAGACGTACAACATCGTTGCTGCACACGGTTACTTCGGTCGCCTGATCTTCCAATACGCT 157791
|| || || || ||||| || || |||||||| || || || ||||||||||||| |||
Sbjct 609 GAAACTTATAATATCGTAGCCGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCT 668
Query 157792 TCATTCAACAACAGCAGAAGTCTTCACTTCTTCCTCGCCGCATGGCCTGTTGTCGGCATC 157851
||||||||| | | | || |||||||| || || |||||||| || || |||
Sbjct 669 AGTTTCAACAACTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATC 728
Query 157852 TGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAAC 157911
||||||||||| | || | ||||| ||||| |||||||| || |||||||| ||||||
Sbjct 729 TGGTTCACTGCTTTAGGTATCAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAAC 788
Query 157912 CAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATGTCCTGAACCGC 157971
|| || | ||||| |||| || ||||| | ||||| ||||| ||| || | |||||
Sbjct 789 CAATCAGTAGTTGATAGTCAAGGCCGTGTAATTAACACTTGGGCTGATATCATTAACCGT 848
Query 157972 GCTGGTCTTGGTATGGAAGTTATGC-ATGAGCGTAACGCACACAACTTCCCACTGGATCT 158030
||| ||||||||||||||||||| |||| ||||| || ||||| ||||| || || |
Sbjct 849 GCTAACCTTGGTATGGAAGTTATGCAATGAACGTAATGCTCACAATTTCCCTCTAGACTT 908
Query 158031 TGCTGCT 158037
||||||
Sbjct 909 AGCTGCT 915
>seq20016
Length=17894
Score = 515 bits (570), Expect = 4e-141
Identities = 730/1016 (72%), Gaps = 9/1016 (1%)
Strand=Plus/Plus
Query 158774 GTTTGACATACTCGACGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGCTGGTCTGG 158833
|||||| || | || |||||| | |||| |||||||||||||| |||||||| ||
Sbjct 13766 GTTTGATATTATGGATGACTGGTTACGTAGGGACCGTTTCGTTTTTGTAGGCTGGTCCGG 13825
Query 158834 ACTTCTTCTTCTACCCAC-TGCTTATCTTGCTATTGGCGGTTGGCTTACTGGCACGACTT 158892
||| || ||| || ||| ||| | ||| | || |||||| | || || || || |
Sbjct 13826 -CTTATTGCTCTTTCCTTGTGCCTATTTCGCTGTAGGGGGTTGGTTCACGGGTACAACCT 13884
Query 158893 TCGCTACGAGCTGGTATACACATGGACTCGCTACTTCCTATCTTGAGGG-TGCAAACTTT 158951
| | || |||||||| |||||| | || | ||||||| | || || ||||| |||
Sbjct 13885 TTGTAACTTCATGGTATACCCATGGATTGGCCAGTTCCTATTTGGAAGGCTGCAA--TTT 13942
Query 158952 CTTA-CAGCAGCAGTTTCGACTCCAGCTGATGCTATGGGTCATTCTCTTCTGCTTCTCTG 159010
|||| | || || ||||| ||||| ||| || | | | |||||| | | | || ||
Sbjct 13943 CTTAACTGCTGCGGTTTCTACTCCTGCTAATAGTTTAGCACATTCTTTATTATTACTATG 14002
Query 159011 GGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTGGGTCCAACTTGGGGGACTCTGGAATTT 159070
||||||||| || ||||| ||||| | ||| ||| | || || || |||| |||
Sbjct 14003 GGGTCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTT 14062
Query 159071 TGTGGCGCTCCACGGTGCCTTTGCCCTAATTGGTTTCATGCTTCGCCAGTTTGAACTGGC 159130
||| || ||||||||||| || | ||||| ||||||||| | || || || ||||| ||
Sbjct 14063 TGTTGCTCTCCACGGTGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTCGAACTTGC 14122
Query 159131 ACG-TCTCATCGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTT 159189
|| ||| || | | || || || ||||| || || ||||||||||| ||||| ||||
Sbjct 14123 TCGATCTGTTCAAT-TGCGCCCTTATAATGCAATCGCATTCTCTGGTCCAATTGCCGTTT 14181
Query 159190 TTGTCAGCGTCTTCCTTATCTACCCACTTGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCT 159249
|||| || ||||| || || ||||| |||||||| ||||||| || || || |
Sbjct 14182 TTGTTTCTGTATTCCTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTT 14241
Query 159250 TTGGGGTGGCCGCAATATTCAGGTTCCTACTCTTCCTACAAGGGTTCCACAATTGGACAC 159309
|||| || || || ||||| | || | ||||| | ||||| || || || ||||||
Sbjct 14242 TTGGTGTAGCAGCTATATTTCGATTTATCCTCTTTTTTCAAGGATTTCATAACTGGACAT 14301
Query 159310 TAAACCCC-TTCCATATGATGGGAGTTGCTGGTATCCTAGGTGGAGCACTTCTATCTGCT 159368
| |||||| || ||||||||||||||||||||| | | || | || | |||| |||
Sbjct 14302 TGAACCCCATTTCATATGATGGGAGTTGCTGGTGTATTGGGCGCTGCTTTGCTATGCGCT 14361
Query 159369 ATTCATGGGGTCACAGTTGAAAATACATTATACGAGGATGGAGAACAAGCAAACACCTTT 159428
|||||||| | || || |||||||| |||| || ||||| || ||||| || ||
Sbjct 14362 ATTCATGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGCGCAAATACATTC 14421
Query 159429 AAGGCGTTTGATTCAACTCAAGAGGAGGAGACTTATTCTATGGTCACTGCAAACCGCTTC 159488
|| ||| | ||||||||| || || |||||||| |||||||| || || |||||
Sbjct 14422 CGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTT 14481
Query 159489 TGGTCGCAGATCTTCGGCATTGCGTTTTCTAACAAGCGGTGGCTTCATTTCTTTATGTTG 159548
||||| || ||||| || |||| ||||| || || || ||| | ||||||||||||||
Sbjct 14482 TGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTA 14541
Query 159549 TTTGTGCCTGTTATGGGTCTATGGACATCCAGTATTGGCATTATTGGTCTTGCTCTCAAT 159608
||||| || || | ||| |||||| | |||| | | ||| | || | ||
Sbjct 14542 TTTGTACCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTTTGGCCTTGAAC 14601
Query 159609 CTTCGTGCTTACGATTTCGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAA 159668
|| ||||| || || ||||| ||| || || | || || |||||||| ||||||||
Sbjct 14602 CTACGTGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCGGAAGATCCTGAATTTGAG 14661
Query 159669 ACGTTCTACACCAAGAACATTCTTCTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCT 159728
|| ||||||||||| || ||||| | || ||||| | ||||||||| |||| ||
Sbjct 14662 ACTTTCTACACCAAAAATATTCTATTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAA 14721
Query 159729 GATCAACCCCATGAAAACTTCATCTTCCCAGAAGAAGTTCTACCAAGAGGTAACGC 159784
||||| || ||||||||| | || ||||| || || |||||||| | || |||||
Sbjct 14722 GATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGC 14777
>seq2990
Length=15620
Score = 390 bits (432), Expect = 1e-103
Identities = 521/716 (73%), Gaps = 6/716 (1%)
Strand=Plus/Plus
Query 157051 TTCTGCGAGTGGGTAACTTCCACCAACAACCGTTTGTATGTTGGTTGGTTCGGTGTGCTT 157110
||||| | ||| |||| |||| | |||||| | || |||| ||||| || || |
Sbjct 14830 TTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGCGTTTTG 14889
Query 157111 ATGATTCCAACATTGCTTGCAGCAACTATCTGC-TTCATTGTTGCATTCGTAGCAGCACC 157169
||||| || || || | | |||||| |||| || ||| | || ||| | || || ||
Sbjct 14890 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTCC 14948
Query 157170 TCCCGTTGATATCGACGGTATTCGCGAACCAGTTGCTGGTTCTCTCATGTATGGCAACAA 157229
||| || ||||| || |||||||| ||||| ||| |||| ||||| | ||||| |||||
Sbjct 14949 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAA 15008
Query 157230 CATCATCTCTGGTGCAGTTGTTCCTTCTTCAAACGCAATCGGTCTTCACTTCTACCCCAT 157289
|| || || ||||| || ||||| |||| || || ||| | || || ||||| ||
Sbjct 15009 TATTATTTCGGGTGCCATTATTCCTACTTCTGCAGCTATAGGTTTGCATTTTTACCCAAT 15068
Query 157290 CTGGGAAGCAGCATCACTTGATGAGTGGCTTTACAACGGTGGTCCTTTCCAACTGGTAGT 157349
|||||||||||||| ||||||| ||| | ||||| |||||||||| |||| | ||
Sbjct 15069 ATGGGAAGCAGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAACTAATTGT 15128
Query 157350 CTTTCACTTCCTGATCGGCATCTATGCCTATATGGGACGTGAGTGGG-AACTTTCTTACC 157408
| |||||| | | || | | || ||||| |||||||||| ||||| || ||
Sbjct 15129 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGGAACTTAGTTTCC 15188
Query 157409 GTTTAGGTATGCGCCCCTGGATCTGTGTTGCCTACTCGGCACCAGTCGCTGCTGCGAGTG 157468
|| | |||||||| || ||||| |||||| || || || || || || ||||||| ||
Sbjct 15189 GTCTGGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTG 15248
Query 157469 CAGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTA 157528
| || ||| | |||| || | |||||||| || || |||| ||||||||| || |
Sbjct 15249 CTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAA 15308
Query 157529 TCTCTGGTACTTTTAACTATATGCTCGTCTTCCAGGCAGAGCACAATATTCTTATGCATC 157588
| ||||||||||| |||| ||| | || |||||||| |||||||| || |||||||| |
Sbjct 15309 TTTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACC 15368
Query 157589 CGTTCCACATGCTCGGCGTTGCTGGGGTATTCGGTGGATCTTTGTTCTCTGCTATGCACG 157648
| || |||||||| ||||| ||||| |||||||| || || | || ||||||||| |
Sbjct 15369 CATTTCACATGCTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATG 15428
Query 157649 GAAGTCTCGTTACTTCCTCGCTTGTTC-GTGAAACAACTGAAACAGAGTCACAGAACTAT 157707
| | | || || | || | ||| || | ||||| || |||| || || ||| |
Sbjct 15429 GTTCTTTGGTAACCT-CTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAACGAA 15487
Query 157708 GGTTACAAGTTCGGTCAAGAAGAAGAGACGTACAACATCGTTGCTGCAC-ACGGTT 157762
||||||| ||||||||||||||||| || || || ||||| || || | ||||||
Sbjct 15488 GGTTACAGATTCGGTCAAGAAGAAGAAACTTATAATATCGTAGCCGCTCTACGGTT 15543
>seq2982
Length=1363
Score = 183 bits (202), Expect = 3e-41
Identities = 252/346 (73%), Gaps = 5/346 (1%)
Strand=Plus/Minus
Query 159442 CAACTCAAGAG-GAGGAGACTTATTCTA-TGGTC-ACTGCAAACCGCTTCTGGTCGCAGA 159498
|||||||||| || || |||||||||| ||||| || || || || | ||||| || |
Sbjct 1318 CAACTCAAGACTGAAGAAACTTATTCTAATGGTCTACCGCTAATCGTCTTTGGTC-CA-A 1261
Query 159499 TCTTCGGCATTGCGTTTTCTAACAAGCGGTGGCTTCATTTCTTTATGTTGTTTGTGCCTG 159558
|||| || |||| ||| |||| || || ||| | |||||||||||||| ||||| || |
Sbjct 1260 TCTTTGGGGTTGCTTTTCCTAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGG 1201
Query 159559 TTATGGGTCTATGGACATCCAGTATTGGCATTATTGGTCTTGCTCTCAATCTTCGTGCTT 159618
| | ||| |||||| | |||| | | ||| | || | || || ||||| |
Sbjct 1200 TAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTTTGGCCTTGAACCTACGTGCCT 1141
Query 159619 ACGATTTCGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAAACGTTCTACA 159678
| || ||||| ||| || || | || || |||||||| |||||||| || |||||||
Sbjct 1140 ATGACTTCGTTTCTCAGGAAATTCGCGCGGCGGAAGATCCTGAATTTGAGACTTTCTACA 1081
Query 159679 CCAAGAACATTCTTCTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCCC 159738
|||| || ||||| | || ||||| | ||||||||| |||| || ||||| || |
Sbjct 1080 CCAAAAATATTCTATTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTC 1021
Query 159739 ATGAAAACTTCATCTTCCCAGAAGAAGTTCTACCAAGAGGTAACGC 159784
|||||||| | || ||||| || || |||||||| | || |||||
Sbjct 1020 ATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGC 975
>seq15940
Length=20296
Score = 172 bits (190), Expect = 6e-38
Identities = 238/328 (73%), Gaps = 4/328 (1%)
Strand=Plus/Plus
Query 159461 TTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGCATTGCGTTTTCTAA 159520
|||||| |||||||| || || ||||| ||||| || ||||| || |||| ||||| ||
Sbjct 19768 TTATTCAATGGTCACCGCTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAA 19827
Query 159521 CAAGCGGTGGCTTCATTTCTTTATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCAG 159580
|| || ||| | |||||||||||||| ||||| || || | ||| ||||||
Sbjct 19828 TAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGC 19887
Query 159581 TATTGGCATTA-TTGGTCTTGCTCTCAATCTTCGTGCTTACGATTTCGTGAGTCAAGAGA 159639
| || | | || | ||| | || | || || ||||| || || ||||| ||| || |
Sbjct 19888 TCTTTGGAGTAGTCGGTTTGGCCTTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAAA 19947
Query 159640 TCAGAGCAGCAGAAGATCCAGAA-TTTGAAACGTTCTACACC-AAGAACATTCTTCTGAA 159697
| | || || |||||||| ||| ||||| || ||||||||| || || ||||| | ||
Sbjct 19948 TTCGCGCGGCGGAAGATCCTGAATTTTGAGACTTTCTACACCAAAAAATATTCTATTAAA 20007
Query 159698 TGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCCCATG-AAAACTTCATCTTCC 159756
||||| | ||||||||| |||| || ||||| || |||| ||||| | || ||||
Sbjct 20008 CGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAAACCTTATATTCC 20067
Query 159757 CAGAAGAAGTTCTACCAAGAGGTAACGC 159784
| || || |||||||| | || |||||
Sbjct 20068 CTGAGGAGGTTCTACCCCGTGGAAACGC 20095
>seq8649
Length=8497
Score = 136 bits (150), Expect = 4e-27
Identities = 202/281 (72%), Gaps = 4/281 (1%)
Strand=Plus/Minus
Query 159508 TTGCGTTTTC-TAACAAGCGGTGGCTTC-ATTTC-TTTATGTTGTTTGTGCCTGTTATG- 159563
|||| ||||| ||| || || ||| | | ||||| |||||||| ||||| || ||||
Sbjct 8470 TTGCTTTTTCCTAATAAACGTTGGTTACTATTTCGTTTATGTTATTTGTACCGGTTAACT 8411
Query 159564 GGTCTATGGACATCCAGTATTGGCATTATTGGTCTTGCTCTCAATCTTCGTGCTTACGAT 159623
||| |||||| | |||| | | ||| | || | || || ||||| || ||
Sbjct 8410 GGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTTTGGCCTTGAACCTACGTGCCTATGAC 8351
Query 159624 TTCGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAAACGTTCTACACCAAG 159683
||||| ||| || || | || || |||||||| |||||||| || |||||||||||
Sbjct 8350 TTCGTTTCTCAGGAAATTCGCGCGGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAA 8291
Query 159684 AACATTCTTCTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCCCATGAA 159743
|| ||||| | || ||||| | ||||||||| |||| || ||||| || ||||||
Sbjct 8290 AATATTCTATTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAA 8231
Query 159744 AACTTCATCTTCCCAGAAGAAGTTCTACCAAGAGGTAACGC 159784
||| | || ||||| || || |||||||| | || |||||
Sbjct 8230 AACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGC 8190
>seq7755
Length=16682
Score = 113 bits (124), Expect = 5e-20
Identities = 149/208 (72%), Gaps = 8/208 (4%)
Strand=Plus/Plus
Query 159366 GCTATTCATGGGGTCACAGTTGAAAATACATTATACGAGGATGGAGAACAAGCAAACACC 159425
|||||||| || | || || ||||||| |||| || ||||| || ||||| ||
Sbjct 3579 GCTATTCAGGGTGCTACCGTATAAAATACTTTATTTGAAGATGGTGATGGCGCAAATACA 3638
Query 159426 TTTAAGGCGTTTGATTCAACTCAAGAGGAGGAGACTTATTCTATGGTCACTGCAAACCGC 159485
|| || ||| | ||||||||| || || |||||||| ||||||||||| || |||
Sbjct 3639 TTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAATCGC 3698
Query 159486 TTCTGGTCGCAGATCTTCGGCATTGCGTTTTCTAACAAGCGGTGGCTTCATTTCTTTATG 159545
|| ||||| ||| |||| ||||| || || || ||| | ||||||||||||
Sbjct 3699 TTTTGGTC--------CCGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATG 3750
Query 159546 TTGTTTGTGCCTGTTATGGGTCTATGGA 159573
|| ||||| || || | ||| ||||||
Sbjct 3751 TTATTTGTACCGGTAACTGGTTTATGGA 3778
>seq12569
Length=659
Score = 104 bits (114), Expect = 3e-17
Identities = 183/259 (71%), Gaps = 7/259 (3%)
Strand=Plus/Plus
Query 158774 GTTTGACATACTCGACGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGCTGGTCTGG 158833
|||||| || | || |||||| | |||| |||||||||||||| |||||||| ||
Sbjct 382 GTTTGATATTATGGATGACTGGTTACGTAGGGACCGTTTCGTTTTTGTAGGCTGGTCCGG 441
Query 158834 ACTTCTT-CTTCTACCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGCACGACTT 158892
||| || || | || ||| ||| | ||| | || |||||| | || || || || |
Sbjct 442 -CTTATTGCTCTTTCCTTGTGCCTATTTCGCTGTAGGGGGTTGGTTCACGGGTACAACCT 500
Query 158893 TCGCTACGAGCTGGTATACACATGGACTCGCTACTTCCTATCTTG-AGGGTGCAAACTTT 158951
| | || |||||||| |||||| | || | ||||||| | | ||| ||||| |||
Sbjct 501 TTGTAACTTCATGGTATACCCATGGATTGGCCAGTTCCTATTTGGAAGGCTGCAA--TTT 558
Query 158952 CTT-ACAGCAGCAGTTTCGACTCCAGCTGATGCTATGGGTCATTCTCTTCTGCTTCT-CT 159009
||| || || || ||||| ||||| ||| || | | | |||||| | | | || |
Sbjct 559 CTTAACTGCTGCGGTTTCTACTCCTGCTAATAGTTTAGCACATTCTTTATTATTACTAGT 618
Query 159010 GGGGTCCTGAGGCTCAAGG 159028
|||||||||| || |||||
Sbjct 619 GGGGTCCTGAAGCACAAGG 637
>seq13577
Length=50240
Score = 96.9 bits (106), Expect = 4e-15
Identities = 152/216 (70%), Gaps = 4/216 (2%)
Strand=Plus/Minus
Query 159509 TGCGTTTTCTAACAAGCGGTGGCTTCATTTCTTTATGTTGTTTGTGCCTGTTATGGGTCT 159568
||| ||||| || || || ||| | ||||||||||| || ||||| || || | ||| |
Sbjct 19382 TGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATCTTATTTGTACCGGTAACTGGTTT 19323
Query 159569 ATGGA--CATCCAGTATTGGCATTATTGGTCTTGCTCTCAATCTTCGTGCTTACGATTTC 159626
||||| || | | |||| | | || | || | || || ||||| || || |||
Sbjct 19322 ATGGATGAATGC--TCTTGGAGTAGTCAGTTTGGCCTTTAACCTACGTGCCTATGACTTC 19265
Query 159627 GTGAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAAACGTTCTACACCAAGAAC 159686
|| ||| || || | | || ||||||| |||||||| || || |||||||| ||
Sbjct 19264 GTTTCTCAGGAAATTCGCGTGGCGAAAGATCCTGAATTTGAGACTTTATACACCAAAAAT 19205
Query 159687 ATTCTTCTGAATGAAGGACTACGTGCTTGGTTGGCA 159722
||||| | || |||||| | |||||||| |||||
Sbjct 19204 ATTCTATTAAACGAAGGAATTGGTGCTTGGATGGCA 19169
>seq9963
Length=9006
Score = 82.4 bits (90), Expect = 8e-11
Identities = 133/187 (71%), Gaps = 11/187 (6%)
Strand=Plus/Plus
Query 158264 TACTCTTGTCGTGCTGGTGCTTGCTCTTCATGTGCAGGTAAAATTGTATCTGGAACTGTT 158323
||||| || | ||||| | |||||||||||||| ||||| | |||||||| || ||
Sbjct 1517 TACTCATGCAGGGCTGGCTCATGCTCTTCATGTGCTGGTAAGGTAGTATCTGGCACCCTT 1576
Query 158324 G----ATCAGAGTGATCAGTCGTTCCTAGACGATGATCAAATCGCAGCAGGATTTGTTCT 158379
| |||||| || || || || || ||||| ||||| | || ||| | || ||
Sbjct 1577 GACCAATCAGATGGA--AG--CTTTCTTGATGATGACCAAATTGAAGAAGGTTGGGTGCT 1632
Query 158380 TACGTGTGTAGCATATCCAACATCTGATTGTGTTGTTGTTACTGATCAAGAGG-AGAACC 158438
||| |||||||| |||||||| |||| |||| | | ||| | | |||| |||||
Sbjct 1633 TACTTGTGTAGCTTATCCAACCAGTGATGTTGTTATCGAGACTCACAAGGAGGAAGAAC- 1691
Query 158439 TTTACTG 158445
||||||
Sbjct 1692 -TTACTG 1697
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 545136770406000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |