Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Conyza_20canadensis_20[genbank_20GCA_5F000775935.1_202014-11-13]
20,075 sequences; 326,165,195 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq13106 132 5e-26
seq8473 132 5e-26
seq5280 118 1e-21
seq8384 114 1e-20
seq7910 114 1e-20
seq4675 114 1e-20
seq16006 104 2e-17
seq16550 102 8e-17
seq1845 98.7 1e-15
seq10926 96.9 3e-15
seq13411 87.8 2e-12
seq5340 87.8 2e-12
>seq13106
Length=76417
Score = 132 bits (146), Expect = 5e-26
Identities = 148/198 (75%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
|||||||| ||||| || ||||| ||| | | ||| ||| ||||||||||||||
Sbjct 56324 GTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCTTCGAGCTGCTTGCCG 56265
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583
||| | ||||| || ||||||||||| ||||||||||||||||| |||||| ||||
Sbjct 56264 GCGAAGATGAGACGTTGCTGGTCGGGTGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTG 56205
Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643
| | || | ||||||| | ||| || || | ||| | || || || || || |||
Sbjct 56204 ACGTTATCGATGGTGTCGGAAGACTCAACCTCTAGGGTTATCGTCTTCCCCGTTAGGGTT 56145
Query 133644 TTTACGAAAATCTGCATG 133661
|| ||||| |||||||||
Sbjct 56144 TTCACGAAGATCTGCATG 56127
>seq8473
Length=8692
Score = 132 bits (146), Expect = 5e-26
Identities = 148/198 (75%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
|||||||| ||||| || ||||| ||| | | ||| ||| ||||||||||||||
Sbjct 5384 GTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCTTCGAGCTGCTTGCCG 5443
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583
||| | ||||| || ||||||||||| ||||||||||||||||| |||||| ||||
Sbjct 5444 GCGAAGATGAGACGTTGCTGGTCGGGTGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTG 5503
Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643
| | || | ||||||| | ||| || || | ||| | || || || || || |||
Sbjct 5504 ACGTTATCGATGGTGTCGGAAGACTCAACCTCTAGGGTTATCGTCTTCCCCGTTAGGGTT 5563
Query 133644 TTTACGAAAATCTGCATG 133661
|| ||||| |||||||||
Sbjct 5564 TTCACGAAGATCTGCATG 5581
>seq5280
Length=29361
Score = 118 bits (130), Expect = 1e-21
Identities = 151/206 (73%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGC 133514
||| | ||| ||||||||||| || |||||||| | | || ||| |||||| |||
Sbjct 6747 ATGGAGGGTAGACTCTTTCTGGATGTTGTAATCAGCAAGGGT--ACGTCCGTCCTCAAGC 6690
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
|||||||| || |||| | || ||||||||| || ||||||||||||||||| ||||
Sbjct 6689 TGCTTGCCAGCAAAAATCAACCTCTGCTGGTCTGGGGGGATGCCTTCCTTGTCCTGGATC 6630
Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634
|| ||| | | || | ||||| | | ||| || || | |||| |||||| ||
Sbjct 6629 TTGGCCTTAACATTATCGATTGTGTCAGAGCTCTCGACCTCCAAAGTGATGGTTTTCCCT 6570
Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660
|||| ||| || || || ||||||||
Sbjct 6569 GTCAAAGTCTTGACAAAGATCTGCAT 6544
Score = 102 bits (112), Expect = 8e-17
Identities = 147/205 (72%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | ||| || || || || |||||||| || ||| ||| ||| | ||||| ||||
Sbjct 6519 ATGGAGGGTCGATTCCTTTTGGATATTGTAGTCTGCCAATGTGCGACCA-TCCTCAAGCT 6461
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
|||| || || | ||||||| ||||||||| || ||||| ||||||||||| ||| |
Sbjct 6460 GCTTTCCGGCAAAGATGAGCCTCTGCTGGTCTGGGGGGATCCCTTCCTTGTCTTGGATTT 6401
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
| ||| | | || | || || | | ||| || || | |||| ||| || || |
Sbjct 6400 TCGCCTTAACATTATCGATGGTATCTGAGCTCTCGACTTCAAGAGTGATGGTCTTACCAG 6341
Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660
| |||||||| || || ||||||||
Sbjct 6340 TGAGAGTTTTAACAAAGATCTGCAT 6316
Score = 91.5 bits (100), Expect = 1e-13
Identities = 145/206 (70%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGAGC 133514
||| | ||||||||| ||||| ||||||||||| | | ||| ||| || || |
Sbjct 6975 ATGAAGGGTGGACTCCTTCTGAATATTGTAATCTGCAA--GTGTACGTCCATCTTCCAAT 6918
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
|| || || ||| | || | || |||||| || || ||||| || ||||| || |||
Sbjct 6917 TGTTTCCCAGCGAAGATCAACCTCTGCTGATCTGGTGGGATCCCCTCCTTATCCTGAATC 6858
Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634
|| ||||| | |||| ||| || | | |||||| || | |||| |||||| ||
Sbjct 6857 TTGGCCTTGACATTGTCAATCGTATCAGAAGACTCCACCTCCAAAGTGATGGTTTTCCCT 6798
Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660
|||| || || || |||||||||||
Sbjct 6797 GTCAAGGTCTTCACAAAAATCTGCAT 6772
>seq8384
Length=24589
Score = 114 bits (126), Expect = 1e-20
Identities = 151/207 (73%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | |||||||| ||||| || |||||||| | | || | | | ||||| ||
Sbjct 3791 AAATGCAGTGTGGACTCCTTCTGAATGTTGTAATCAGCAAGGGTACGTCCA-TCCTCAAG 3733
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||||||| ||| |||| | || ||||||||| || ||||| ||||| ||||| |||
Sbjct 3732 CTGCTTGCCAGCGAAAATCAACCTCTGCTGGTCTGGGGGGATACCTTCTTTGTCCTGGAT 3673
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||||| | || | ||||| | | ||| || || | |||| |||||| ||
Sbjct 3672 CTTAGCCTTGACGTTATCGATTGTGTCAGAGCTCTCGACTTCCAAAGTGATGGTTTTTCC 3613
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| ||||| || || || ||||||||
Sbjct 3612 TGTGAGAGTCTTAACAAAGATCTGCAT 3586
Score = 105 bits (116), Expect = 6e-18
Identities = 148/206 (72%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGC 133514
||| | ||| || || || || || ||||||||| ||| || |||| ||||||||||
Sbjct 3561 ATGGAGGGTTGATTCCTTTTGAATGTTGTAATCGGCCAAGGT--ACGACCGTCCTCGAGC 3504
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
||||| || || | || | || ||||||||| || ||||| ||||| ||||| |||
Sbjct 3503 TGCTTTCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGGATCCCTTCTTTGTCTTGGATT 3444
Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634
|| ||| | | || | ||||| | | ||| || |||| |||| |||||| ||
Sbjct 3443 TTCGCCTTAACATTATCGATAGTGTCAGAGCTCTCGACTTCGAGAGTGATGGTTTTACCA 3384
Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660
|| ||||| || || || ||||||||
Sbjct 3383 GTAAGAGTCTTAACAAAGATCTGCAT 3358
Score = 100 bits (110), Expect = 3e-16
Identities = 147/206 (71%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGC 133514
||| | ||| ||||| ||||| || || ||||| ||| || ||| |||||| |||
Sbjct 4017 ATGGAGGGTAGACTCCTTCTGAATGTTATAATCAGCCAAAGT--ACGTCCGTCCTCAAGC 3960
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
|||||||| || |||| | || ||||||||| || ||||| |||||||| || ||||
Sbjct 3959 TGCTTGCCAGCAAAAATCAACCTCTGCTGGTCTGGTGGGATTCCTTCCTTATCTTGGATC 3900
Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634
||| ||||| | |||| || || | ||| || || | || | ||||| ||
Sbjct 3899 TTTGCCTTGACGTTGTCAATGGTATCCGAACTCTCAACCTCCAAAGTAATTGTTTTTCCT 3840
Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660
|||| ||||| || || ||||||||
Sbjct 3839 GTCAAGGTTTTCACAAATATCTGCAT 3814
>seq7910
Length=9655
Score = 114 bits (126), Expect = 1e-20
Identities = 151/207 (73%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | |||||||| ||||| || |||||||| | | || | | | ||||| ||
Sbjct 2027 AAATGCAGTGTGGACTCCTTCTGAATGTTGTAATCAGCAAGGGTACGTCCA-TCCTCAAG 1969
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||||||| ||| |||| | || ||||||||| || ||||| ||||| ||||| |||
Sbjct 1968 CTGCTTGCCAGCGAAAATCAACCTCTGCTGGTCTGGGGGGATACCTTCTTTGTCCTGGAT 1909
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||||| | || | ||||| | | ||| || || | |||| |||||| ||
Sbjct 1908 CTTAGCCTTGACGTTATCGATTGTGTCAGAGCTCTCGACTTCCAAAGTGATGGTTTTTCC 1849
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| ||||| || || || ||||||||
Sbjct 1848 TGTGAGAGTCTTAACAAAGATCTGCAT 1822
Score = 105 bits (116), Expect = 6e-18
Identities = 148/206 (72%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGC 133514
||| | ||| || || || || || ||||||||| ||| || |||| ||||||||||
Sbjct 1797 ATGGAGGGTTGATTCCTTTTGAATGTTGTAATCGGCCAAGGT--ACGACCGTCCTCGAGC 1740
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
||||| || || | || | || ||||||||| || ||||| ||||| ||||| |||
Sbjct 1739 TGCTTTCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGGATCCCTTCTTTGTCTTGGATT 1680
Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634
|| ||| | | || | ||||| | | ||| || |||| |||| |||||| ||
Sbjct 1679 TTCGCCTTAACATTATCGATAGTGTCAGAGCTCTCGACTTCGAGAGTGATGGTTTTACCA 1620
Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660
|| ||||| || || || ||||||||
Sbjct 1619 GTAAGAGTCTTAACAAAGATCTGCAT 1594
Score = 100 bits (110), Expect = 3e-16
Identities = 147/206 (71%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGC 133514
||| | ||| ||||| ||||| || || ||||| ||| || ||| |||||| |||
Sbjct 2253 ATGGAGGGTAGACTCCTTCTGAATGTTATAATCAGCCAAAGT--ACGTCCGTCCTCAAGC 2196
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
|||||||| || |||| | || ||||||||| || ||||| |||||||| || ||||
Sbjct 2195 TGCTTGCCAGCAAAAATCAACCTCTGCTGGTCTGGTGGGATTCCTTCCTTATCTTGGATC 2136
Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634
||| ||||| | |||| || || | ||| || || | || | ||||| ||
Sbjct 2135 TTTGCCTTGACGTTGTCAATGGTATCCGAACTCTCAACCTCCAAAGTAATTGTTTTTCCT 2076
Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660
|||| ||||| || || ||||||||
Sbjct 2075 GTCAAGGTTTTCACAAATATCTGCAT 2050
>seq4675
Length=16269
Score = 114 bits (126), Expect = 1e-20
Identities = 151/207 (73%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | |||||||| ||||| || |||||||| | | || | | | ||||| ||
Sbjct 16178 AAATGCAGTGTGGACTCCTTCTGAATGTTGTAATCAGCAAGGGTACGTCCA-TCCTCAAG 16120
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||||||| ||| |||| | || ||||||||| || ||||| ||||| ||||| |||
Sbjct 16119 CTGCTTGCCAGCGAAAATCAACCTCTGCTGGTCTGGGGGGATACCTTCTTTGTCCTGGAT 16060
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||||| | || | ||||| | | ||| || || | |||| |||||| ||
Sbjct 16059 CTTAGCCTTGACGTTATCGATTGTGTCAGAGCTCTCGACTTCCAAAGTGATGGTTTTTCC 16000
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| ||||| || || || ||||||||
Sbjct 15999 TGTGAGAGTCTTAACAAAGATCTGCAT 15973
Score = 105 bits (116), Expect = 6e-18
Identities = 148/206 (72%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGC 133514
||| | ||| || || || || || ||||||||| ||| || |||| ||||||||||
Sbjct 15948 ATGGAGGGTTGATTCCTTTTGAATGTTGTAATCGGCCAAGGT--ACGACCGTCCTCGAGC 15891
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
||||| || || | || | || ||||||||| || ||||| ||||| ||||| |||
Sbjct 15890 TGCTTTCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGGATCCCTTCTTTGTCTTGGATT 15831
Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634
|| ||| | | || | ||||| | | ||| || |||| |||| |||||| ||
Sbjct 15830 TTCGCCTTAACATTATCGATAGTGTCAGAGCTCTCGACTTCGAGAGTGATGGTTTTACCA 15771
Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660
|| ||||| || || || ||||||||
Sbjct 15770 GTAAGAGTCTTAACAAAGATCTGCAT 15745
>seq16006
Length=16259
Score = 104 bits (114), Expect = 2e-17
Identities = 150/209 (72%), Gaps = 6/209 (3%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCA---TCGTGGACGAGTCCTCG 133511
||||| | ||||||||||| || || ||||| ||| ||| || || | | ||||||
Sbjct 13240 AAATGCAATGTGGACTCTTTTTGGATGTTGTAGTCGGCCAGGGTCCTG--CCA-TCCTCG 13184
Query 133512 AGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTG 133571
|| |||||||| || |||| | || |||||||| || ||||| ||||| || || |
Sbjct 13183 AGTTGCTTGCCAGCAAAAATCAACCTTTGCTGGTCTGGCGGGATCCCTTCTTTATCTTGG 13124
Query 133572 ATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTG 133631
|||||| ||||| | |||| ||||| | | || || || | |||| ||| ||
Sbjct 13123 ATCTTTGCCTTGACGTTGTCAATGGTGTCAGAGCTTTCGACCTCCAAAGTGATGGTCTTC 13064
Query 133632 CCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| |||| ||| || ||||| || |||||
Sbjct 13063 CCTGTCAAAGTCTTGACGAAGATTTGCAT 13035
Score = 104 bits (114), Expect = 2e-17
Identities = 149/207 (72%), Gaps = 6/207 (3%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCA---TCGTGGACGAGTCCTCGAG 133513
||| | ||| ||||||||||| || |||||||| | | || || | | || || ||
Sbjct 13694 ATGGAGGGTCGACTCTTTCTGAATGTTGTAATCAGCAAGGGTCCTG--CCA-TCTTCCAG 13638
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
|||||| || || | || | || ||||||||| || ||||| |||||||| || ||
Sbjct 13637 CTGCTTACCAGCAAATATCAACCTCTGCTGGTCCGGTGGGATACCTTCCTTATCTTGAAT 13578
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||||| | |||| ||| |||| | || || || | |||| ||| || ||
Sbjct 13577 CTTGGCCTTGACGTTGTCAATCGTATCGGAGCTTTCTACCTCCAAAGTGATGGTCTTTCC 13518
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
||||| ||||| ||||||||||||||
Sbjct 13517 GGTCAAGGTTTTCACGAAAATCTGCAT 13491
Score = 84.2 bits (92), Expect = 2e-11
Identities = 142/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514
||||| | ||| ||||||||||| |||||||| || | | || | || ||||||
Sbjct 13468 AAATGAAGGGTAGACTCTTTCTGGATATTGTAGTCTGCTAGAGTACGCCCATCTTCGAGC 13409
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
|| || || || | || |||| |||||||| || ||||| || || || || |||
Sbjct 13408 TGTTTTCCTGCAAAGATAAGCCTTTGCTGGTCTGGCGGGATCCCCTCTTTATCCTGAATC 13349
Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634
|| ||||| | |||| ||| || | || || || | |||| |||||| ||
Sbjct 13348 TTAGCCTTGACGTTGTCAATCGTATCAGAACTTTCAACCTCTAAAGTGATGGTTTTTCCT 13289
Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660
|||| ||||| || || ||||||||
Sbjct 13288 GTCAAGGTTTTCACAAATATCTGCAT 13263
>seq16550
Length=20979
Score = 102 bits (112), Expect = 8e-17
Identities = 146/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514
||||| | || ||||| || || || |||||||| | | || | ||||| |||
Sbjct 17925 AAATGCAGAGTCGACTCCTTTTGAATGTTGTAATCAGCAAGGGTACGCCCATCCTCAAGC 17984
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
||||| || || | || |||| ||| ||||| || ||||| |||||||| || |||
Sbjct 17985 TGCTTTCCAGCAAAGATCAGCCTCTGTTGGTCTGGTGGGATCCCTTCCTTATCTTGAATC 18044
Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634
||| ||||| | |||| || || | | || || || | |||| |||||| ||
Sbjct 18045 TTTGCCTTGACATTATCAATAGTATCCGAGCTTTCAACCTCCAAAGTGATGGTTTTCCCT 18104
Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660
|||| ||||||||| |||||||||||
Sbjct 18105 GTCAAAGTTTTTACAAAAATCTGCAT 18130
>seq1845
Length=6980
Score = 98.7 bits (108), Expect = 1e-15
Identities = 149/209 (71%), Gaps = 6/209 (3%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCA---TCGTGGACGAGTCCTCG 133511
|| || | ||| ||||| || || || ||||| || ||| || || | | |||||
Sbjct 3768 AAGTGGAGGGTAGACTCCTTTTGGATGTTGTAGTCTGCCAAGGTCCTG--CCA-TCCTCA 3824
Query 133512 AGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTG 133571
|||||||| || ||| |||| | || |||||| || || ||||| ||||||||||| |
Sbjct 3825 AGCTGCTTACCAGCGAAAATCAACCTCTGCTGATCTGGGGGGATCCCTTCCTTGTCCTGG 3884
Query 133572 ATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTG 133631
||||| ||||| | |||| ||||| | | || || || | |||| ||| ||
Sbjct 3885 ATCTTAGCCTTGACGTTGTCAATGGTGTCAGAGCTTTCGACCTCCAAAGTGATGGTCTTT 3944
Query 133632 CCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
||||||| || || ||||| ||||||||
Sbjct 3945 CCGGTCAACGTCTTGACGAAGATCTGCAT 3973
Score = 95.1 bits (104), Expect = 1e-14
Identities = 114/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
||||||||||||||||| || | || |||| |||||||| || ||||| |||||||||
Sbjct 4047 TCCTCGAGCTGCTTGCCAGCAAAGATAAGCCTTTGCTGGTCTGGGGGGATCCCTTCCTTG 4106
Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625
|| ||| || ||||| | || | ||||||| | ||| || || | |||| |
Sbjct 4107 TCTTGGATTTTCGCCTTGACATTATCGATTGTGTCGGAGCTCTCAACCTCTAGAGTGATG 4166
Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| ||||| || || || || || || ||||||||
Sbjct 4167 GTCTTGCCAGTGAGGGTCTTAACAAAGATCTGCAT 4201
>seq10926
Length=11099
Score = 96.9 bits (106), Expect = 3e-15
Identities = 147/207 (71%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| || | ||| ||||||||||| || |||||||| | | || ||| | || || ||
Sbjct 8277 AAGTGAAGGGTAGACTCTTTCTGGATGTTGTAATCAGCTAGAGTACGACCA-TCTTCAAG 8335
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||| || || || | || |||| ||||||||| || ||||| ||||| || || |||
Sbjct 8336 CTGTTTTCCTGCAAAGATAAGCCTCTGCTGGTCCGGTGGGATTCCTTCTTTATCTTGGAT 8395
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||||| | |||| || || | | || || || | || | |||||| ||
Sbjct 8396 CTTAGCCTTGACGTTGTCAATGGTATCCGAGCTTTCAACCTCCAAAGTAATGGTTTTCCC 8455
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
|||| |||||| || |||||||||||
Sbjct 8456 TGTCAAAGTTTTCACAAAAATCTGCAT 8482
Score = 86.0 bits (94), Expect = 6e-12
Identities = 141/198 (71%), Gaps = 4/198 (2%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| || || ||||| || || || || ||| ||| | | | ||||| |||||||||||
Sbjct 8514 GTCGATTCCTTCTGGATGTTATAGTCTGCCAAGGTGCGGCCA-TCCTCAAGCTGCTTGCC 8572
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| |||| | || ||||||||| || ||||| || |||||||| ||||| |||
Sbjct 8573 AGCAAAAATCAACCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGAATCTTAGCCTT 8632
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | |||| ||||| | | || || || | |||| || || ||||||| |||
Sbjct 8633 GACGTTGTCAATGGTGTCAGAGCTTTCGACCTCCA-AGTGA-TGTCTTCCCGGTCAAAGT 8690
Query 133643 TTTTACGAAAATCTGCAT 133660
|| ||||| ||||||||
Sbjct 8691 CTTGACGAAGATCTGCAT 8708
Score = 86.0 bits (94), Expect = 6e-12
Identities = 142/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516
||| | ||| || || || || || |||||||| ||| || | ||||||||||||
Sbjct 8733 ATGGAGGGTTGATTCCTTTTGGATGTTGTAATCTGCCAAGGTACGCCCGTCCTCGAGCTG 8792
Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576
|||||| || | || | || ||| ||||| || ||||| ||||||||||| ||| ||
Sbjct 8793 CTTGCCAGCAAAGATCAACCTCTGTTGGTCTGGTGGGATCCCTTCCTTGTCCTGGATTTT 8852
Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636
||||| | || | || || | | ||| || |||| |||| |||| | ||
Sbjct 8853 CGCCTTGACATTATCGATGGTATCTGAGCTCTCGACCTCGAGAGTGATAGTTT--ACCGT 8910
Query 133637 CAGAGTTTTTACGAAAATCTGCAT 133660
||||| || || || ||||||||
Sbjct 8911 AAGAGTCTTCACAAAGATCTGCAT 8934
>seq13411
Length=19963
Score = 87.8 bits (96), Expect = 2e-12
Identities = 143/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514
||||| | ||||| ||||| || |||||||| ||| | | || ||| || ||
Sbjct 11467 AAATGAAGAGTGGATTCTTTTTGGATATTGTAGTCGGCTAATGTCCTGCCGTCTTCAAGT 11408
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
|| ||||| || | || | || || ||||| || ||||||||||| ||||| |||
Sbjct 11407 TGTTTGCCTGCAAAGATTAAACGTTGTTGGTCTGGTGGGATGCCTTCTTTGTCTTGAATC 11348
Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634
|| || | | || | ||||||| || || || || | ||| | |||||||||
Sbjct 11347 TTGGCTTTCACATTGTCGATTGTGTCGGAGGATTCGACTTCTAAGGTTATTGTTTTGCCG 11288
Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660
|| | ||||||||||| ||||||||
Sbjct 11287 GTTAAGGTTTTTACGAAGATCTGCAT 11262
>seq5340
Length=22833
Score = 87.8 bits (96), Expect = 2e-12
Identities = 143/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514
||||| | ||||| ||||| || |||||||| ||| | | || ||| || ||
Sbjct 14284 AAATGAAGAGTGGATTCTTTTTGGATATTGTAGTCGGCTAATGTCCTGCCGTCTTCAAGT 14343
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
|| ||||| || | || | || || ||||| || ||||||||||| ||||| |||
Sbjct 14344 TGTTTGCCTGCAAAGATTAAACGTTGTTGGTCTGGTGGGATGCCTTCTTTGTCTTGAATC 14403
Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634
|| || | | || | ||||||| || || || || | ||| | |||||||||
Sbjct 14404 TTGGCTTTCACATTGTCGATTGTGTCGGAGGATTCGACTTCTAAGGTTATTGTTTTGCCG 14463
Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660
|| | ||||||||||| ||||||||
Sbjct 14464 GTTAAGGTTTTTACGAAGATCTGCAT 14489
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483299491593000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |