Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conyza_20canadensis_20[genbank_20GCA_5F000775935.1_202014-11-13] 20,075 sequences; 326,165,195 total letters Query= NC_026924.1 Length=174885 Score E Sequences producing significant alignments: (Bits) Value seq20014 607 9e-169 seq20016 520 1e-142 seq2978 511 5e-140 seq2990 358 7e-94 seq2982 170 2e-37 seq15940 167 3e-36 seq8649 129 7e-25 seq12569 107 2e-18 seq7755 95.1 1e-14 >seq20014 Length=5322 Score = 607 bits (672), Expect = 9e-169 Identities = 731/989 (74%), Gaps = 4/989 (0%) Strand=Plus/Minus Query 159960 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 160019 ||||| | ||| |||| ||| | ||||| || || | || ||||| ||||| || Sbjct 1920 TTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGCGTTTTG 1861 Query 160020 ATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 160078 ||||| || || | ||| | ||||| ||||| || || |||||||| | |||||||| Sbjct 1860 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTCC 1802 Query 160079 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 160138 || || || || || || || |||||||| || |||| || || | ||||| ||||| Sbjct 1801 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAA 1742 Query 160139 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 160198 || || || ||||| || |||| |||| || || ||| | || || || || || Sbjct 1741 TATTATTTCGGGTGCCATTATTCCTACTTCTGCAGCTATAGGTTTGCATTTTTACCCAAT 1682 Query 160199 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 160258 |||||||| ||||| ||||||| ||| | || || |||||||||| |||| | || Sbjct 1681 ATGGGAAGCAGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAACTAATTGT 1622 Query 160259 ATTTCACTTCCTTATCGGCATCTATGCATATATGGGACGTGAGTGGGAACTTTCATACCG 160318 | |||||| | | || | | || ||||| ||||||||||||||| | ||| Sbjct 1621 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCG 1562 Query 160319 TTTAGGTATGCGCCCCTGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCATCTGC 160378 | | |||||||| || ||||| ||| |||||||| ||||| || || || || |||| Sbjct 1561 TCTGGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGC 1502 Query 160379 TGTATTCCTCGTATATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTAT 160438 ||| ||| | | || || | |||||||| || || |||| ||||||||| || || Sbjct 1501 TGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAAT 1442 Query 160439 CTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCATCC 160498 ||||||||||| |||| |||| |||||||||| || || ||||| ||||||||||| || Sbjct 1441 TTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCC 1382 Query 160499 GTTCCACATGCTCGGCGTTGCTGGGGTATTCGGTGGATCTTTGTTCTCTGCTATGCACGG 160558 || |||||||| ||||| ||||| |||||||| || || | || ||||||||| || Sbjct 1381 ATTTCACATGCTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGG 1322 Query 160559 AAGTCTCGTTACTTCCTCACTCGTTC-GTGAAACGACTGAAACAGAGTCACAGAACTACG 160617 | | || || || | | | || | ||||| || |||| || || ||| | | Sbjct 1321 TTCTTTGGTAACCTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAACGAAG 1263 Query 160618 GTTATAAGTTCGGTCAAGAGGAAGAGACCTACAACATCGTCGCAGCCCATGGTTACTTCG 160677 |||| | ||||||||||| ||||| || || || ||||| || || || ||||| || | Sbjct 1262 GTTACAGATTCGGTCAAGAAGAAGAAACTTATAATATCGTAGCCGCTCACGGTTATTTTG 1203 Query 160678 GTCGTTTGATCTTCCAATATGCATCATTCAACAACTCCCGTTCACTTCACTTCTTCCTGG 160737 | || ||||||||||||||||| ||||||||||| ||||| | || |||||||| | Sbjct 1202 GCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACATTTCTTCCTAG 1143 Query 160738 CAGCATGGCCTGTAGTCGGAATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCA 160797 | || ||||||||||| || ||||||||||||||| | ||| | ||||| ||||| |||| Sbjct 1142 CTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCTTTCA 1083 Query 160798 ACCTCAACGGTTTCAACTTCAACCAGTCCATCCTCGATGGTCAAGGTCGTGTACTGAACA 160857 |||| || |||||||| |||||||| || | | ||| ||||||| |||||| | |||| Sbjct 1082 ACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGCCGTGTAATTAACA 1023 Query 160858 CCTGGGCAGACGTACTGAATCGTGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACG 160917 | ||||| || | | || |||||| ||||||||||||||||||||||| ||||| | Sbjct 1022 CTTGGGCTGATATCATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 963 Query 160918 CACACAACTTCCCACTCGACCTCGCTGCT 160946 | ||||| ||||| || ||| | |||||| Sbjct 962 CTCACAATTTCCCTCTAGACTTAGCTGCT 934 >seq20016 Length=17894 Score = 520 bits (576), Expect = 1e-142 Identities = 736/1024 (72%), Gaps = 9/1024 (1%) Strand=Plus/Plus Query 161687 GTTTGACATACTCGACGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGCTGGTCTGG 161746 |||||| || | || |||||| | |||| |||||||||||||| |||||||| || Sbjct 13766 GTTTGATATTATGGATGACTGGTTACGTAGGGACCGTTTCGTTTTTGTAGGCTGGTCCGG 13825 Query 161747 ACTTCTT-CTTCTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGCACAACTT 161805 ||| || || |||| ||| ||| | ||| | || |||||| | || || ||||| | Sbjct 13826 -CTTATTGCTCTTTCCTTGTGCCTATTTCGCTGTAGGGGGTTGGTTCACGGGTACAACCT 13884 Query 161806 TCGCAACGAGCTGGTATACCCATGGTCTCGCTAGTTCCTATCTTG-AGGGTGCAAACTTT 161864 | | ||| |||||||||||||| | || ||||||||| | | ||| ||||| ||| Sbjct 13885 TTGTAACTTCATGGTATACCCATGGATTGGCCAGTTCCTATTTGGAAGGCTGCAA--TTT 13942 Query 161865 CTT-ACAGCGTCAGTTAGCACTCCAGCTGACGCTATGGGTCATTCTCTTCTTCTT-CTCT 161922 ||| || || | ||| ||||| ||| | | | | |||||| || || || || | Sbjct 13943 CTTAACTGCTGCGGTTTCTACTCCTGCTAATAGTTTAGCACATTCT-TTATTATTACTAT 14001 Query 161923 GGGGTCCTGAGGCTCAAGGGGATTTCGTCCGCTGGGTCCAACTTGGGGGACTCTGGAATT 161982 |||||||||| || ||||| ||||| || ||| ||| | || || || |||| || Sbjct 14002 GGGGTCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTT 14061 Query 161983 TTGTGGCACTCCATGGTGCCTTCGCCCTAATTGGATTCATGCTCCGTCAGTTTGAACTGG 162042 |||| || ||||| ||||| |||| ||||| || |||||| | ||||| || ||||| | Sbjct 14062 TTGTTGCTCTCCACGGTGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTCGAACTTG 14121 Query 162043 CACGTCTTATTGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTT 162102 | || | || | || || || ||||| || || ||||||||||| ||||| |||| Sbjct 14122 CTCGATCTGTTCAATTGCGCCCTTATAATGCAATCGCATTCTCTGGTCCAATTGCCGTTT 14181 Query 162103 TTGTCAGCGTCTTCCTTATCTACCCATTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCT 162162 |||| || ||||| || || ||| | |||||||| ||||||| || || || | Sbjct 14182 TTGTTTCTGTATTCCTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTT 14241 Query 162163 TTGGGGTGGCAGCAATCTTTAGATTCCTGTTGTTTCTTCAAGGATTCCATAACTGGACCC 162222 |||| || ||||| || ||| |||| | | ||| |||||||||| ||||||||||| Sbjct 14242 TTGGTGTAGCAGCTATATTTCGATTTATCCTCTTTTTTCAAGGATTTCATAACTGGACAT 14301 Query 162223 TGAACCCC-TTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTTCTATCTGCT 162281 |||||||| || ||||||||||||||||||||| || | || | || | |||| ||| Sbjct 14302 TGAACCCCATTTCATATGATGGGAGTTGCTGGTGTATTGGGCGCTGCTTTGCTATGCGCT 14361 Query 162282 ATTCACGGAGTCACAGTTGAAAATACATTATACGAGGATGGAGAACAAGCAAACACCTTT 162341 ||||| || | || || |||||||| |||| || ||||| || ||||| || || Sbjct 14362 ATTCATGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGCGCAAATACATTC 14421 Query 162342 AAGGCGTTTGATTCGACACAGGAGGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTC 162401 || ||| | | || || | ||||| |||||||| |||||||| || || ||||| Sbjct 14422 CGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTT 14481 Query 162402 TGGTCGCAGATCTTCGGTATTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTG 162461 ||||| || ||||| || |||| ||||| || || || ||| | ||||| || ||||| Sbjct 14482 TGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTA 14541 Query 162462 TTTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAAC 162521 ||||| || || | ||| |||||| || |||| | | ||| | || | ||| Sbjct 14542 TTTGTACCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTTTGGCCTTGAAC 14601 Query 162522 CTTCGTGCTTACGATTTCGTGAGTCAGGAGATCAGAGCAGCAGAAGATCCTGAGTTTGAA 162581 || ||||| || || ||||| |||||| || | || || ||||||||||| ||||| Sbjct 14602 CTACGTGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCGGAAGATCCTGAATTTGAG 14661 Query 162582 ACGTTCTACACTAAGAACATTCTGCTCAATGAAGGACTACGTGCATGGTTAGCACCTGCC 162641 || |||||||| || || ||||| | || ||||| | ||||| ||| | || || Sbjct 14662 ACTTTCTACACCAAAAATATTCTATTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAA 14721 Query 162642 GACCAACCCCATGAGAACTTTATCTTCCCAGAAGAAGTTCTTCCTAGAGGCAACGCCCTT 162701 || || || ||||| ||| |||| ||||| || || ||||| || | || ||||| ||| Sbjct 14722 GATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTT 14781 Query 162702 TAAT 162705 |||| Sbjct 14782 TAAT 14785 >seq2978 Length=1535 Score = 511 bits (566), Expect = 5e-140 Identities = 667/908 (73%), Gaps = 15/908 (2%) Strand=Plus/Plus Query 160052 TTTCATCGTCGCCTTCGTCGCTG-CTCCCCCTGTGGACATCGAC-GGCATC-CGTGAACC 160108 ||| || |||||||| | |||| |||| || || || || || || || |||||||| Sbjct 10 TTTTATTATCGCCTTCATTGCTGACTCCTCCAGTAGATATTGATAGGTATTACGTGAACC 69 Query 160109 CG---TCGCTGGTTCACTCA--TGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCA 160163 | |||| || || | | ||||| ||||| || || || ||||| || |||| Sbjct 70 TAGTTTTACTGGATCTCTTACTTTTATGG-AACAATATTATTTCGGGTGCCATTATTCCT 128 Query 160164 TCTTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCC-GCATCACTTGA-TG 160221 |||| || || ||| | || || || || || ||||||| | ||||| |||| || Sbjct 129 ACTTCTGCAGCTATAGGTTTGCATTTTTACCCAATATGGGAAGGCAGCATCTGTTGAATG 188 Query 160222 AGTGGCTGTATAAC-GGTGGTCCTTTCCAACTCGTAGTATTTCACTTCCTTATCGGCATC 160280 | ||| | || || |||||||||| |||| | || | |||||| | | || | Sbjct 189 AATGGTTATACAATAGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTA 248 Query 160281 TATGCATATATGGGACGTGAGTGGGAACTTTCATACCGTTTAGGTATGCGCCCCTGGATC 160340 | || ||||| ||||||||||||||| | |||| | |||||||| || ||||| Sbjct 249 GCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGACCTTGGATT 308 Query 160341 TGTGTAGCATATTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCTCGTATATCCTTTC 160400 ||| |||||||| ||||| || || || || ||||||| ||| | | || || | Sbjct 309 GCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTTGATCTACCCAATT 368 Query 160401 GGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATG 160460 |||||||| || || |||| ||||||||| || || ||||||||||| |||| |||| Sbjct 369 GGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATG 428 Query 160461 CTTGTATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACATGCTCGGCGTTGCT 160520 |||||||||| || || ||||| ||||||||||| || || |||||||| ||||| ||| Sbjct 429 ATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGCTAGGCGTAGCT 488 Query 160521 GGGGTATTCGGTGGATCTTTGTTCTCTGCTATGCACGGAAGTCTCGTTACTTCCTCACTC 160580 || |||||||| || || | || ||||||||| || | | || || || | | Sbjct 489 GGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGTTCTTTGGTAACCTC-TAGTTT 547 Query 160581 GTTC-GTGAAACGACTGAAACAGAGTCACAGAACTACGGTTATAAGTTCGGTCAAGAGGA 160639 | || | ||||| || |||| || || ||| | ||||| | ||||||||||| || Sbjct 548 GATCAGGGAAACCACAGAAAATGAATCTGCTAACGAAGGTTACAGATTCGGTCAAGAAGA 607 Query 160640 AGAGACCTACAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATATGC 160699 ||| || || || ||||| || || || ||||| || || || ||||||||||||||||| Sbjct 608 AGAAACTTATAATATCGTAGCCGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGC 667 Query 160700 ATCATTCAACAACTCCCGTTCACTTCACTTCTTCCTGGCAGCATGGCCTGTAGTCGGAAT 160759 ||||||||||| ||||| | || |||||||| || || ||||||||||| || || Sbjct 668 TAGTTTCAACAACTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTAT 727 Query 160760 CTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAA 160819 ||||||||||||| | ||| | ||||| ||||| |||||||| || |||||||| ||||| Sbjct 728 CTGGTTCACTGCTTTAGGTATCAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAA 787 Query 160820 CCAGTCCATCCTCGATGGTCAAGGTCGTGTACTGAACACCTGGGCAGACGTACTGAATCG 160879 ||| || | | ||| ||||||| |||||| | ||||| ||||| || | | || || Sbjct 788 CCAATCAGTAGTTGATAGTCAAGGCCGTGTAATTAACACTTGGGCTGATATCATTAACCG 847 Query 160880 TGCTGGTCTTGGTATGGAAGTTATGC-ATGAGCGTAACGCACACAACTTCCCACTCGACC 160938 |||| ||||||||||||||||||| |||| ||||| || ||||| ||||| || ||| Sbjct 848 TGCTAACCTTGGTATGGAAGTTATGCAATGAACGTAATGCTCACAATTTCCCTCTAGACT 907 Query 160939 TCGCTGCT 160946 | |||||| Sbjct 908 TAGCTGCT 915 >seq2990 Length=15620 Score = 358 bits (396), Expect = 7e-94 Identities = 565/793 (71%), Gaps = 16/793 (2%) Strand=Plus/Plus Query 159960 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 160019 ||||| | ||| |||| ||| | ||||| || || | || ||||| ||||| || Sbjct 14830 TTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGCGTTTTG 14889 Query 160020 ATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 160078 ||||| || || | ||| | ||||| ||||| || || |||||||| | |||||||| Sbjct 14890 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTCC 14948 Query 160079 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 160138 || || || || || || || |||||||| || |||| || || | ||||| ||||| Sbjct 14949 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAA 15008 Query 160139 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 160198 || || || ||||| || |||| |||| || || ||| | || || || || || Sbjct 15009 TATTATTTCGGGTGCCATTATTCCTACTTCTGCAGCTATAGGTTTGCATTTTTACCCAAT 15068 Query 160199 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 160258 |||||||| ||||| ||||||| ||| | || || |||||||||| |||| | || Sbjct 15069 ATGGGAAGCAGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAACTAATTGT 15128 Query 160259 ATTTCACTTCCTTATCGGCATCTATGCATATATGGGACGTGAGTGGG-AACTTTCATACC 160317 | |||||| | | || | | || ||||| |||||||||| ||||| | || Sbjct 15129 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGGAACTTAGTTTCC 15188 Query 160318 GTTTAGGTATGCGCCCCTGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCATCTG 160377 || | |||||||| || ||||| ||| |||||||| ||||| || || || || ||| Sbjct 15189 GTCTGGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTG 15248 Query 160378 CTGTATTCCTCGTATATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTA 160437 |||| ||| | | || || | |||||||| || || |||| ||||||||| || | Sbjct 15249 CTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAA 15308 Query 160438 TCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCATC 160497 | ||||||||||| |||| |||| |||||||||| || || ||||| ||||||||||| | Sbjct 15309 TTTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACC 15368 Query 160498 CGTTCCACATGCTCGGCGTTGCTGGGGTATTCGGTGGATCTTTGTTCTCTGCTATGCACG 160557 | || |||||||| ||||| ||||| |||||||| || || | || ||||||||| | Sbjct 15369 CATTTCACATGCTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATG 15428 Query 160558 GAAGTCTCGTTACTTCCTCACTCGTTC-GTGAAACGACTGAAACAGAGTCACAGAACTAC 160616 | | | || || | || | | || | ||||| || |||| || || ||| | Sbjct 15429 GTTCTTTGGTAACCT-CTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAACGAA 15487 Query 160617 GGTTATAAGTTCGGTCAAGAGGAAGAGACCTACAACATCGTCGCAGC-CCATGG-TTACT 160674 ||||| | ||||||||||| ||||| || || || ||||| || || | | || ||| | Sbjct 15488 GGTTACAGATTCGGTCAAGAAGAAGAAACTTATAATATCGTAGCCGCTCTACGGTTTATT 15547 Query 160675 TCGGTCGT-TTGA-TCTT--CCAATATGCATCA---TTCAACAACTC-CCGTTCACTTC- 160725 | || ||| |||| |||| | |||||| | | | ||||||||| ||||| | | Sbjct 15548 TTGGCCGTATTGATTCTTACCTAATATGTCTTAGTTTACAACAACTCTTCGTTCTTTACT 15607 Query 160726 ACTTCTTCCTGGC 160738 | |||||||| || Sbjct 15608 ATTTCTTCCTAGC 15620 >seq2982 Length=1363 Score = 170 bits (188), Expect = 2e-37 Identities = 246/342 (72%), Gaps = 4/342 (1%) Strand=Plus/Minus Query 162366 GAAGAGACTTATTCTA-TGGTC-ACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTG 162423 ||||| |||||||||| ||||| || || || || | ||||| || ||||| || ||| Sbjct 1306 GAAGAAACTTATTCTAATGGTCTACCGCTAATCGTCTTTGGTC-CA-ATCTTTGGGGTTG 1249 Query 162424 CGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTAT 162483 | ||| |||| || || ||| | ||||| || ||||| ||||| || || | ||| ||| Sbjct 1248 CTTTTCCTAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTAT 1189 Query 162484 GGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTGA 162543 ||| || |||| | | ||| | || | ||||| ||||| || || ||||| Sbjct 1188 GGATGAGTGCTCTTGGAGTAGTCGGTTTGGCCTTGAACCTACGTGCCTATGACTTCGTTT 1129 Query 162544 GTCAGGAGATCAGAGCAGCAGAAGATCCTGAGTTTGAAACGTTCTACACTAAGAACATTC 162603 |||||| || | || || ||||||||||| ||||| || |||||||| || || |||| Sbjct 1128 CTCAGGAAATTCGCGCGGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTC 1069 Query 162604 TGCTCAATGAAGGACTACGTGCATGGTTAGCACCTGCCGACCAACCCCATGAGAACTTTA 162663 | | || ||||| | ||||| ||| | || || || || || ||||| ||| ||| Sbjct 1068 TATTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTA 1009 Query 162664 TCTTCCCAGAAGAAGTTCTTCCTAGAGGCAACGCCCTTTAAT 162705 | ||||| || || ||||| || | || ||||| ||||||| Sbjct 1008 TATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAAT 967 >seq15940 Length=20296 Score = 167 bits (184), Expect = 3e-36 Identities = 243/337 (72%), Gaps = 6/337 (2%) Strand=Plus/Plus Query 162374 TTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCGTTTTCTAA 162433 |||||| |||||||| || || ||||| ||||| || ||||| || |||| ||||| || Sbjct 19768 TTATTCAATGGTCACCGCTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAA 19827 Query 162434 CAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACA--TCC 162491 || || ||| | ||||| || ||||| ||||| || || | ||| |||||| | | Sbjct 19828 TAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGC 19887 Query 162492 TCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTGAGTCAGGAG 162551 ||| |||| | | ||| | || | ||||| ||||| || || ||||| |||||| Sbjct 19888 TCT-TTGGAGTAGTCGGTTTGGCCTTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAA 19946 Query 162552 ATCAGAGCAGCAGAAGATCCTG-AGTTTGAAACGTTCTACA-CTAAGAACATTCTGCTCA 162609 || | || || |||||||||| | ||||| || ||||||| | || || ||||| | | Sbjct 19947 ATTCGCGCGGCGGAAGATCCTGAATTTTGAGACTTTCTACACCAAAAAATATTCTATTAA 20006 Query 162610 ATGAAGGACTACGTGCATGGTTAGCACCTGCCGACCAACCCCATG-AGAACTTTATCTTC 162668 | ||||| | ||||| ||| | || || || || || |||| | ||| |||| ||| Sbjct 20007 ACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAAACCTTATATTC 20066 Query 162669 CCAGAAGAAGTTCTTCCTAGAGGCAACGCCCTTTAAT 162705 || || || ||||| || | || ||||| ||||||| Sbjct 20067 CCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAAT 20103 >seq8649 Length=8497 Score = 129 bits (142), Expect = 7e-25 Identities = 204/289 (71%), Gaps = 4/289 (1%) Strand=Plus/Minus Query 162421 TTGCGTTTTC-TAACAAGCGGTGGCTTCATTTT--TTCATGTTGTTTGTGCCTGTTATG- 162476 |||| ||||| ||| || || ||| | | ||| || ||||| ||||| || |||| Sbjct 8470 TTGCTTTTTCCTAATAAACGTTGGTTACTATTTCGTTTATGTTATTTGTACCGGTTAACT 8411 Query 162477 GGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGAT 162536 ||| |||||| || |||| | | ||| | || | ||||| ||||| || || Sbjct 8410 GGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTTTGGCCTTGAACCTACGTGCCTATGAC 8351 Query 162537 TTCGTGAGTCAGGAGATCAGAGCAGCAGAAGATCCTGAGTTTGAAACGTTCTACACTAAG 162596 ||||| |||||| || | || || ||||||||||| ||||| || |||||||| || Sbjct 8350 TTCGTTTCTCAGGAAATTCGCGCGGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAA 8291 Query 162597 AACATTCTGCTCAATGAAGGACTACGTGCATGGTTAGCACCTGCCGACCAACCCCATGAG 162656 || ||||| | || ||||| | ||||| ||| | || || || || || ||||| Sbjct 8290 AATATTCTATTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAA 8231 Query 162657 AACTTTATCTTCCCAGAAGAAGTTCTTCCTAGAGGCAACGCCCTTTAAT 162705 ||| |||| ||||| || || ||||| || | || ||||| ||||||| Sbjct 8230 AACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAAT 8182 >seq12569 Length=659 Score = 107 bits (118), Expect = 2e-18 Identities = 186/260 (72%), Gaps = 9/260 (3%) Strand=Plus/Plus Query 161687 GTTTGACATACTCGACGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGCTGGTCTGG 161746 |||||| || | || |||||| | |||| |||||||||||||| |||||||| || Sbjct 382 GTTTGATATTATGGATGACTGGTTACGTAGGGACCGTTTCGTTTTTGTAGGCTGGTCCGG 441 Query 161747 ACTTCTT-CTTCTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGCACAACTT 161805 ||| || || |||| ||| ||| | ||| | || |||||| | || || ||||| | Sbjct 442 -CTTATTGCTCTTTCCTTGTGCCTATTTCGCTGTAGGGGGTTGGTTCACGGGTACAACCT 500 Query 161806 TCGCAACGAGCTGGTATACCCATGGTCTCGCTAGTTCCTATCTTG-AGGGTGCAAACTTT 161864 | | ||| |||||||||||||| | || ||||||||| | | ||| ||||| ||| Sbjct 501 TTGTAACTTCATGGTATACCCATGGATTGGCCAGTTCCTATTTGGAAGGCTGCAA--TTT 558 Query 161865 CTT-ACAGCGTCAGTTAGCACTCCAGCTGACGCTATGGGTCATTCTCTTCTTCTT-CT-C 161921 ||| || || | ||| ||||| ||| | | | | |||||| || || || || Sbjct 559 CTTAACTGCTGCGGTTTCTACTCCTGCTAATAGTTTAGCACATTCT-TTATTATTACTAG 617 Query 161922 TGGGGTCCTGAGGCTCAAGG 161941 ||||||||||| || ||||| Sbjct 618 TGGGGTCCTGAAGCACAAGG 637 >seq7755 Length=16682 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/208 (70%), Gaps = 8/208 (4%) Strand=Plus/Plus Query 162279 GCTATTCACGGAGTCACAGTTGAAAATACATTATACGAGGATGGAGAACAAGCAAACACC 162338 |||||||| || | || || ||||||| |||| || ||||| || ||||| || Sbjct 3579 GCTATTCAGGGTGCTACCGTATAAAATACTTTATTTGAAGATGGTGATGGCGCAAATACA 3638 Query 162339 TTTAAGGCGTTTGATTCGACACAGGAGGAAGAGACTTATTCTATGGTCACTGCAAACCGC 162398 || || ||| | | || || | ||||| |||||||| ||||||||||| || ||| Sbjct 3639 TTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAATCGC 3698 Query 162399 TTCTGGTCGCAGATCTTCGGTATTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATG 162458 || ||||| ||| |||| ||||| || || || ||| | ||||| || ||| Sbjct 3699 TTTTGGTC--------CCGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATG 3750 Query 162459 TTGTTTGTGCCTGTTATGGGTCTATGGA 162486 || ||||| || || | ||| |||||| Sbjct 3751 TTATTTGTACCGGTAACTGGTTTATGGA 3778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 559363599465000