Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conyza_20canadensis_20[genbank_20GCA_5F000775935.1_202014-11-13] 20,075 sequences; 326,165,195 total letters Query= NC_026928.1 Length=189418 Score E Sequences producing significant alignments: (Bits) Value seq20014 580 1e-160 seq2978 480 1e-130 seq20016 453 1e-122 seq2990 396 3e-105 seq2982 150 2e-31 seq15940 149 8e-31 seq8649 105 8e-18 seq7755 104 3e-17 >seq20014 Length=5322 Score = 580 bits (642), Expect = 1e-160 Identities = 717/978 (73%), Gaps = 2/978 (0%) Strand=Plus/Minus Query 177849 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 177908 ||||| | ||| |||| ||| | ||||| || || | || ||||| ||||| || Sbjct 1920 TTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGCGTTTTG 1861 Query 177909 ATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 177967 ||||| || || | ||| | |||||| ||||| || || |||||||| | |||||||| Sbjct 1860 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTCC 1802 Query 177968 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGCAACAA 178027 || || || || || || || |||||||| || |||| || || | ||||| ||||| Sbjct 1801 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAA 1742 Query 178028 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 178087 || || || ||||| || |||| |||| || || ||| | || || || || || Sbjct 1741 TATTATTTCGGGTGCCATTATTCCTACTTCTGCAGCTATAGGTTTGCATTTTTACCCAAT 1682 Query 178088 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 178147 |||||||| ||||| ||||||| ||| | || || |||||||||| |||| | || Sbjct 1681 ATGGGAAGCAGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAACTAATTGT 1622 Query 178148 ATTTCACTTCCTCATTGGTATCTATGCATACATGGGACGTGAGTGGGAACTTTCATACCG 178207 | |||||| | ||||| | | |||||||| ||||||||||||||| | ||| Sbjct 1621 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCG 1562 Query 178208 TTTAGGTATGCGCCCCTGGATCTGTGTAGCATACTCTGCTCCAGTAGCAGCAGCATCGGC 178267 | | |||||||| || ||||| ||| ||||| || ||||| || ||||| || | || Sbjct 1561 TCTGGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGC 1502 Query 178268 AGTATTCCTGGTCTATCCTTTCGGTCAAGGTTCATTTTCTGACGCAATGCCACTTGGCAT 178327 || ||| || |||| || | |||||||| |||||||| | ||||| || || || Sbjct 1501 TGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAAT 1442 Query 178328 CTCTGGTACATTCAACTACATGCTTGTTTTCCAAGCAGAACACAACATTCTGATGCACCC 178387 |||||||| ||||||| |||| |||| ||||| || || |||||||| || |||||||| Sbjct 1441 TTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCC 1382 Query 178388 CTTCCACATGTTGGGTGTCGCAGGTGTATTCGGTGGTTCACTGTTCAGTGCAATGCACGG 178447 || |||||| | || || || ||||||||||| || || || || ||||| ||||| || Sbjct 1381 ATTTCACATGCTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGG 1322 Query 178448 TTCTTTGGTTACATCTTCACTCGTTCGTGAAACGACTGAAACAGAATCACAGAACTATGG 178507 ||||||||| || ||| | | | ||||| || |||| ||||| ||| | || Sbjct 1321 TTCTTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAACGAAGG 1262 Query 178508 TTATAAGTTCGGACAAGAAGAAGAGACATACAACATCGTTGCAGCACATGGCTACTTCGG 178567 ||| | ||||| ||||||||||| || || || ||||| || || || || || || || Sbjct 1261 TTACAGATTCGGTCAAGAAGAAGAAACTTATAATATCGTAGCCGCTCACGGTTATTTTGG 1202 Query 178568 TCGTTTGATCTTCCAATATGCTTCATTCAACAACTCACGTTCACTGCACTTCTTCCTCGC 178627 || |||||||||||||||||| ||||||||||| ||||| | || |||||||| || Sbjct 1201 CCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACATTTCTTCCTAGC 1142 Query 178628 AGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTGGGCGTAAGCACCATGGCATTTAA 178687 || ||||||||||| || ||||||||||| || | || | ||||| ||||| || || Sbjct 1141 TGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCTTTCAA 1082 Query 178688 CCTCAATGGATTCAACTTCAACCAGTCCATCCTCGACGGACAAGGACGTGTCCTCAACAC 178747 ||| ||||| ||||| |||||||| || | | || | ||||| ||||| | ||||| Sbjct 1081 CCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGCCGTGTAATTAACAC 1022 Query 178748 ATGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACGAGCGCAACGC 178807 ||||| || | | |||||||| || || |||||||| ||||| || || || || Sbjct 1021 TTGGGCTGATATCATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGC 962 Query 178808 GCACAACTTCCCGCTTGA 178825 ||||| ||||| || || Sbjct 961 TCACAATTTCCCTCTAGA 944 >seq2978 Length=1535 Score = 480 bits (532), Expect = 1e-130 Identities = 652/897 (73%), Gaps = 13/897 (1%) Strand=Plus/Plus Query 177941 TTTCATCGTCGCCTTCGTCGCTG-CTCCCCCTGTGGACATCGAC-GGCATC-CGTGAACC 177997 ||| || |||||||| | |||| |||| || || || || || || || |||||||| Sbjct 10 TTTTATTATCGCCTTCATTGCTGACTCCTCCAGTAGATATTGATAGGTATTACGTGAACC 69 Query 177998 CG---TCGCTGGTTCACTCA--TGTATGGCAACAACATCATCTCTGGTGCAGTTGTTCCA 178052 | |||| || || | | ||||| ||||| || || || ||||| || |||| Sbjct 70 TAGTTTTACTGGATCTCTTACTTTTATGG-AACAATATTATTTCGGGTGCCATTATTCCT 128 Query 178053 TCTTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCC-GCATCACTTGA-TG 178110 |||| || || ||| | || || || || || ||||||| | ||||| |||| || Sbjct 129 ACTTCTGCAGCTATAGGTTTGCATTTTTACCCAATATGGGAAGGCAGCATCTGTTGAATG 188 Query 178111 AGTGGCTGTATAAC-GGTGGTCCTTTCCAACTCGTAGTATTTCACTTCCTCATTGGTATC 178169 | ||| | || || |||||||||| |||| | || | |||||| | ||||| | Sbjct 189 AATGGTTATACAATAGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTA 248 Query 178170 TATGCATACATGGGACGTGAGTGGGAACTTTCATACCGTTTAGGTATGCGCCCCTGGATC 178229 | |||||||| ||||||||||||||| | |||| | |||||||| || ||||| Sbjct 249 GCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGACCTTGGATT 308 Query 178230 TGTGTAGCATACTCTGCTCCAGTAGCAGCAGCATCGGCAGTATTCCTGGTCTATCCTTTC 178289 ||| ||||| || ||||| || ||||| || | || || ||| || |||| || | Sbjct 309 GCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTTGATCTACCCAATT 368 Query 178290 GGTCAAGGTTCATTTTCTGACGCAATGCCACTTGGCATCTCTGGTACATTCAACTACATG 178349 |||||||| |||||||| | ||||| || || || |||||||| ||||||| |||| Sbjct 369 GGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATG 428 Query 178350 CTTGTTTTCCAAGCAGAACACAACATTCTGATGCACCCCTTCCACATGTTGGGTGTCGCA 178409 |||| ||||| || || |||||||| || |||||||| || |||||| | || || || Sbjct 429 ATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGCTAGGCGTAGCT 488 Query 178410 GGTGTATTCGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTC 178469 ||||||||||| || || || || ||||| ||||| ||||||||||| || ||| | Sbjct 489 GGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTG 548 Query 178470 GTTCGTGAAACGACTGAAACAGAATCACAGAACTATGGTTATAAGTTCGGACAAGAAGAA 178529 | | ||||| || |||| ||||| ||| | ||||| | ||||| ||||||||| Sbjct 549 ATCAGGGAAACCACAGAAAATGAATCTGCTAACGAAGGTTACAGATTCGGTCAAGAAGAA 608 Query 178530 GAGACATACAACATCGTTGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATATGCT 178589 || || || || ||||| || || || || || || || || |||||||||||||||||| Sbjct 609 GAAACTTATAATATCGTAGCCGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCT 668 Query 178590 TCATTCAACAACTCACGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGAATC 178649 ||||||||||| ||||| | || |||||||| || || ||||||||||| || ||| Sbjct 669 AGTTTCAACAACTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATC 728 Query 178650 TGGTTCACCGCACTGGGCGTAAGCACCATGGCATTTAACCTCAATGGATTCAACTTCAAC 178709 |||||||| || | || | ||||| ||||| || ||||| ||||| ||||| |||||| Sbjct 729 TGGTTCACTGCTTTAGGTATCAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAAC 788 Query 178710 CAGTCCATCCTCGACGGACAAGGACGTGTCCTCAACACATGGGCAGACGTGCTCAACCGT 178769 || || | | || | ||||| ||||| | ||||| ||||| || | | |||||| Sbjct 789 CAATCAGTAGTTGATAGTCAAGGCCGTGTAATTAACACTTGGGCTGATATCATTAACCGT 848 Query 178770 GCCGGTCTCGGCATGGAAGTCATGC-ACGAGCGCAACGCGCACAACTTCCCGCTTGA 178825 || || || |||||||| |||| | || || || || ||||| ||||| || || Sbjct 849 GCTAACCTTGGTATGGAAGTTATGCAATGAACGTAATGCTCACAATTTCCCTCTAGA 905 >seq20016 Length=17894 Score = 453 bits (502), Expect = 1e-122 Identities = 707/1003 (70%), Gaps = 7/1003 (1%) Strand=Plus/Plus Query 179222 GTTCGATGTCCTGGACGACTGGGTTAAACGGGATCGCTTTGTCTTTGTGGGTTGGTCTGG 179281 ||| ||| | |||| |||||| | |||| || || || ||||| || ||||| || Sbjct 13766 GTTTGATATTATGGATGACTGGTTACGTAGGGACCGTTTCGTTTTTGTAGGCTGGTCCGG 13825 Query 179282 ACTCCTACTTCTTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTT 179341 | | || |||| ||| ||| | || | || |||||| | || || ||| | || Sbjct 13826 CTTATTGCTCTTTCCTTGTGCCTATTTCGCTGTAGGGGGTTGGTTCACGGGTACAACCTT 13885 Query 179342 TGTTACGAGTTGGTACACCCACGGTCTTGCTAGTTCCTATCTTGAGGG-TGCTAACTTTC 179400 ||| || ||||| ||||| || | || ||||||||| | || || ||| | |||| Sbjct 13886 TGTAACTTCATGGTATACCCATGGATTGGCCAGTTCCTATTTGGAAGGCTGCAA--TTTC 13943 Query 179401 TTA-CGGCAGCTGTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGG 179459 ||| | || || || || || |||||| || | | | |||||| | | |||| ||| Sbjct 13944 TTAACTGCTGCGGTTTCTACTCCTGCTAATAGTTTAGCACATTCTTTATTATTACTATGG 14003 Query 179460 GGTCCTGAGTCTCAGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTCTGGAATTTC 179519 |||||||| | || || |||| || ||||| ||| | || || || |||| ||| Sbjct 14004 GGTCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTTT 14063 Query 179520 GTGGCTCTCCACGGTGCCTTCGCTCTCATTGGTTTCATGCTTAGGCAATTTGAACTTGCT 179579 || |||||||||||||| |||| || || ||||||||| | | ||||| ||||||||| Sbjct 14064 GTTGCTCTCCACGGTGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTCGAACTTGCT 14123 Query 179580 CGC-CTGATTGGTATCAGACCTTACAATGCGATTGCTTTTTCTGGTCCTATTGCTGTATT 179638 || ||| | | | | ||||| ||||| || || || |||||||| ||||| || || Sbjct 14124 CGATCTGTTCAATTGC-GCCCTTATAATGCAATCGCATTCTCTGGTCCAATTGCCGTTTT 14182 Query 179639 CGTCAGTGTTTTCCTCATCTATCCTTTGGGACAGTCCTCTTGGTTTTTCGCGCCGTCCTT 179698 || ||| ||||| || ||||| | || ||||| |||||| || ||||| || Sbjct 14183 TGTTTCTGTATTCCTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAGTTT 14242 Query 179699 TGGTGTCGCGGCGATCTTCAGGTTCTTGCTGTTCCTTCAGGGTTTCCACAACTGGACGCT 179758 |||||| || || || || | || | || || |||| || || || |||||||| | Sbjct 14243 TGGTGTAGCAGCTATATTTCGATTTATCCTCTTTTTTCAAGGATTTCATAACTGGACATT 14302 Query 179759 CAACCCC-TTCCATATGATGGGAGTTGCTGGTATACTAGGAGGAGCACTGCTCAGTGCTA 179817 |||||| || ||||||||||||||||||||| || | || | || |||| | |||| Sbjct 14303 GAACCCCATTTCATATGATGGGAGTTGCTGGTGTATTGGGCGCTGCTTTGCTATGCGCTA 14362 Query 179818 TCCATGGAGTTACTGTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAATACCTTTA 179877 | ||||| | ||||||||| ||||| || | ||||||||| || |||||||| || Sbjct 14363 TTCATGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGCGCAAATACATTCC 14422 Query 179878 AGGCGTTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCT 179937 || ||| | | || || | ||||| |||||||| |||||||| || || ||||| | Sbjct 14423 GTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTTT 14482 Query 179938 GGTCGCAGATCTTCGGTATTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGT 179997 |||| || ||||| || |||| ||||| || || || ||| | ||||| || ||||| | Sbjct 14483 GGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTAT 14542 Query 179998 TTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACC 180057 |||| || || | ||| |||||| || |||| | | ||| | || | |||| Sbjct 14543 TTGTACCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTTTGGCCTTGAACC 14602 Query 180058 TTCGTGCTTACGATTTCGTAAGTCAGGAGATCAGAGCAGCAGAAGATCCCGAGTTTGAGA 180117 | ||||| || || ||||| |||||| || | || || |||||||| || ||||||| Sbjct 14603 TACGTGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCGGAAGATCCTGAATTTGAGA 14662 Query 180118 CCTTCTACACCAAGAACATTCTTCTCAATGAAGGACTACGTGCATGGTTGGCACCAGTTG 180177 | ||||||||||| || ||||| | || ||||| | ||||| ||| |||| | | Sbjct 14663 CTTTCTACACCAAAAATATTCTATTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAG 14722 Query 180178 ATCAACCACATGAGTCATTCGTATTCCCAGAAGAAGTTCTGCC 180220 |||| || ||||| | ||||||| || || ||||| || Sbjct 14723 ATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACC 14765 >seq2990 Length=15620 Score = 396 bits (438), Expect = 3e-105 Identities = 572/792 (72%), Gaps = 14/792 (2%) Strand=Plus/Plus Query 177849 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 177908 ||||| | ||| |||| ||| | ||||| || || | || ||||| ||||| || Sbjct 14830 TTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGCGTTTTG 14889 Query 177909 ATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 177967 ||||| || || | ||| | |||||| ||||| || || |||||||| | |||||||| Sbjct 14890 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTCC 14948 Query 177968 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGCAACAA 178027 || || || || || || || |||||||| || |||| || || | ||||| ||||| Sbjct 14949 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAA 15008 Query 178028 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 178087 || || || ||||| || |||| |||| || || ||| | || || || || || Sbjct 15009 TATTATTTCGGGTGCCATTATTCCTACTTCTGCAGCTATAGGTTTGCATTTTTACCCAAT 15068 Query 178088 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 178147 |||||||| ||||| ||||||| ||| | || || |||||||||| |||| | || Sbjct 15069 ATGGGAAGCAGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAACTAATTGT 15128 Query 178148 ATTTCACTTCCTCATTGGTATCTATGCATACATGGGACGTGAGTGGG-AACTTTCATACC 178206 | |||||| | ||||| | | |||||||| |||||||||| ||||| | || Sbjct 15129 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGGAACTTAGTTTCC 15188 Query 178207 GTTTAGGTATGCGCCCCTGGATCTGTGTAGCATACTCTGCTCCAGTAGCAGCAGCATCGG 178266 || | |||||||| || ||||| ||| ||||| || ||||| || ||||| || | | Sbjct 15189 GTCTGGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTG 15248 Query 178267 CAGTATTCCTGGTCTATCCTTTCGGTCAAGGTTCATTTTCTGACGCAATGCCACTTGGCA 178326 | || ||| || |||| || | |||||||| |||||||| | ||||| || || | Sbjct 15249 CTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAA 15308 Query 178327 TCTCTGGTACATTCAACTACATGCTTGTTTTCCAAGCAGAACACAACATTCTGATGCACC 178386 | |||||||| ||||||| |||| |||| ||||| || || |||||||| || ||||||| Sbjct 15309 TTTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACC 15368 Query 178387 CCTTCCACATGTTGGGTGTCGCAGGTGTATTCGGTGGTTCACTGTTCAGTGCAATGCACG 178446 | || |||||| | || || || ||||||||||| || || || || ||||| ||||| | Sbjct 15369 CATTTCACATGCTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATG 15428 Query 178447 GTTCTTTGGTTACATCTTCACTCGTTCGTGAAACGACTGAAACAGAATCACAGAACTATG 178506 |||||||||| || ||| | | | ||||| || |||| ||||| ||| | | Sbjct 15429 GTTCTTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAACGAAG 15488 Query 178507 GTTATAAGTTCGGACAAGAAGAAGAGACATACAACATCGTTGCAGCAC-ATGG-CTACTT 178564 |||| | ||||| ||||||||||| || || || ||||| || || | | || || || Sbjct 15489 GTTACAGATTCGGTCAAGAAGAAGAAACTTATAATATCGTAGCCGCTCTACGGTTTATTT 15548 Query 178565 CGGTCGT-TTGA-TCTT--CCAATATG-CTTCATT--CAACAACTC-ACGTTCACTGC-A 178615 || ||| |||| |||| | |||||| ||| || ||||||||| ||||| | | | Sbjct 15549 TGGCCGTATTGATTCTTACCTAATATGTCTTAGTTTACAACAACTCTTCGTTCTTTACTA 15608 Query 178616 CTTCTTCCTCGC 178627 |||||||| || Sbjct 15609 TTTCTTCCTAGC 15620 >seq2982 Length=1363 Score = 150 bits (166), Expect = 2e-31 Identities = 261/373 (70%), Gaps = 5/373 (1%) Strand=Plus/Minus Query 179851 AAGATGGAGAACAAGCAAATACCTTTAAGGCGTTTGATTCGACACAGGAA-GAAGAGACT 179909 ||||||| || |||||||| || || ||| | | || || || ||||| ||| Sbjct 1357 AAGATGGTGATGGCGCAAATACATTCCGTGCTTTTAACCCAACTCAAGACTGAAGAAACT 1298 Query 179910 TATTCTA-TGGTC-ACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCATTTTCTA 179967 ||||||| ||||| || || || || | ||||| || ||||| || |||| ||| ||| Sbjct 1297 TATTCTAATGGTCTACCGCTAATCGTCTTTGGTC-CA-ATCTTTGGGGTTGCTTTTCCTA 1240 Query 179968 ACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCT 180027 | || || ||| | ||||| || ||||| ||||| || || | ||| |||||| Sbjct 1239 ATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTG 1180 Query 180028 CTATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTAAGTCAGGAGA 180087 || |||| | | ||| | || | ||||| ||||| || || ||||| |||||| | Sbjct 1179 CTCTTGGAGTAGTCGGTTTGGCCTTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAAA 1120 Query 180088 TCAGAGCAGCAGAAGATCCCGAGTTTGAGACCTTCTACACCAAGAACATTCTTCTCAATG 180147 | | || || |||||||| || |||||||| ||||||||||| || ||||| | || | Sbjct 1119 TTCGCGCGGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTATTAAACG 1060 Query 180148 AAGGACTACGTGCATGGTTGGCACCAGTTGATCAACCACATGAGTCATTCGTATTCCCAG 180207 |||| | ||||| ||| |||| | ||||| || ||||| | ||||||| | Sbjct 1059 AAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTG 1000 Query 180208 AAGAAGTTCTGCC 180220 | || ||||| || Sbjct 999 AGGAGGTTCTACC 987 >seq15940 Length=20296 Score = 149 bits (164), Expect = 8e-31 Identities = 227/317 (72%), Gaps = 6/317 (2%) Strand=Plus/Plus Query 179909 TTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCATTTTCTAA 179968 |||||| |||||||| || || ||||| ||||| || ||||| || |||| ||||| || Sbjct 19768 TTATTCAATGGTCACCGCTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAA 19827 Query 179969 CAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACA--TCC 180026 || || ||| | ||||| || ||||| ||||| || || | ||| |||||| | | Sbjct 19828 TAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGC 19887 Query 180027 TCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTAAGTCAGGAG 180086 ||| |||| | | ||| | || | ||||| ||||| || || ||||| |||||| Sbjct 19888 TCT-TTGGAGTAGTCGGTTTGGCCTTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAA 19946 Query 180087 ATCAGAGCAGCAGAAGATCCCGAGTTT-GAGACCTTCTACACC-AAGAACATTCTTCTCA 180144 || | || || |||||||| || ||| ||||| ||||||||| || || ||||| | | Sbjct 19947 ATTCGCGCGGCGGAAGATCCTGAATTTTGAGACTTTCTACACCAAAAAATATTCTATTAA 20006 Query 180145 ATGAAGGACTACGTGCATGGTTGGCACCAGTTGATCAACCACATGAGTCA-TTCGTATTC 180203 | ||||| | ||||| ||| |||| | ||||| || ||||| | | ||||| Sbjct 20007 ACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAAACCTTATATTC 20066 Query 180204 CCAGAAGAAGTTCTGCC 180220 || || || ||||| || Sbjct 20067 CCTGAGGAGGTTCTACC 20083 >seq8649 Length=8497 Score = 105 bits (116), Expect = 8e-18 Identities = 187/269 (70%), Gaps = 4/269 (1%) Strand=Plus/Minus Query 179956 TTGCATTTTC-TAACAAGCGGTGGCTTCATTTT--TTCATGTTGTTTGTGCCTGTTATG- 180011 |||| ||||| ||| || || ||| | | ||| || ||||| ||||| || |||| Sbjct 8470 TTGCTTTTTCCTAATAAACGTTGGTTACTATTTCGTTTATGTTATTTGTACCGGTTAACT 8411 Query 180012 GGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGAT 180071 ||| |||||| || |||| | | ||| | || | ||||| ||||| || || Sbjct 8410 GGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTTTGGCCTTGAACCTACGTGCCTATGAC 8351 Query 180072 TTCGTAAGTCAGGAGATCAGAGCAGCAGAAGATCCCGAGTTTGAGACCTTCTACACCAAG 180131 ||||| |||||| || | || || |||||||| || |||||||| ||||||||||| Sbjct 8350 TTCGTTTCTCAGGAAATTCGCGCGGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAA 8291 Query 180132 AACATTCTTCTCAATGAAGGACTACGTGCATGGTTGGCACCAGTTGATCAACCACATGAG 180191 || ||||| | || ||||| | ||||| ||| |||| | ||||| || ||||| Sbjct 8290 AATATTCTATTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAA 8231 Query 180192 TCATTCGTATTCCCAGAAGAAGTTCTGCC 180220 | ||||||| || || ||||| || Sbjct 8230 AACCTTATATTCCCTGAGGAGGTTCTACC 8202 >seq7755 Length=16682 Score = 104 bits (114), Expect = 3e-17 Identities = 147/208 (71%), Gaps = 8/208 (4%) Strand=Plus/Plus Query 179814 GCTATCCATGGAGTTACTGTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAATACC 179873 ||||| || || | ||| ||| | ||||| || | ||||||||| || |||||||| Sbjct 3579 GCTATTCAGGGTGCTACCGTATAAAATACTTTATTTGAAGATGGTGATGGCGCAAATACA 3638 Query 179874 TTTAAGGCGTTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGC 179933 || || ||| | | || || | ||||| |||||||| ||||||||||| || ||| Sbjct 3639 TTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAATCGC 3698 Query 179934 TTCTGGTCGCAGATCTTCGGTATTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATG 179993 || ||||| ||| |||| ||||| || || || ||| | ||||| || ||| Sbjct 3699 TTTTGGTC--------CCGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATG 3750 Query 179994 TTGTTTGTGCCTGTTATGGGTCTATGGA 180021 || ||||| || || | ||| |||||| Sbjct 3751 TTATTTGTACCGGTAACTGGTTTATGGA 3778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 605857529466000