Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conyza_20canadensis_20[genbank_20GCA_5F000775935.1_202014-11-13] 20,075 sequences; 326,165,195 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq12084 93.3 5e-14 >seq12084 Length=12162 Score = 93.3 bits (102), Expect = 5e-14 Identities = 142/197 (72%), Gaps = 4/197 (2%) Strand=Plus/Minus Query 14152 AAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCA-G 14210 ||| |||||||| |||||||| | |||||||||||||| || | |||||||| || Sbjct 7427 AAAACCATCCATTTCAGTCAACAACTGATTGATGGTTTGCTCCCTCTCATCATTTCCACC 7368 Query 14211 GCATACCACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATAC 14270 | || |||||| | | ||| | || || ||||| || ||||| ||||| || |||| Sbjct 7367 TCCTA-AACCCGCCCCTCTCTGCCTCCCCACTGCGTCTATCTCATCAATGAATACAATAC 7309 Query 14271 ATGGTTGATTTTCA-CGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCC 14329 | || || |||| | || |||||| | ||| | || || ||||| |||||| Sbjct 7308 AAGG-TGCTTTTGATTTCGCCTTTTCAAACAAATCCCTAACCCTAGATGCACCAACACCC 7250 Query 14330 ACAAACATCTCCACAAA 14346 ||||||| ||| ||||| Sbjct 7249 ACAAACAACTCAACAAA 7233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618280011417000