Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conyza_20canadensis_20[genbank_20GCA_5F000775935.1_202014-11-13] 20,075 sequences; 326,165,195 total letters Query= NC_031944.1 Length=185102 Score E Sequences producing significant alignments: (Bits) Value seq20014 672 0.0 seq2978 556 2e-153 seq20016 551 6e-152 seq2990 437 1e-117 seq2982 214 2e-50 seq15940 194 2e-44 seq7755 129 7e-25 seq13577 114 2e-20 seq6618 105 8e-18 seq12569 95.1 1e-14 >seq20014 Length=5322 Score = 672 bits (744), Expect = 0.0 Identities = 741/987 (75%), Gaps = 0/987 (0%) Strand=Plus/Minus Query 169352 TTCTGTAACTGGGTAACCTCCACTGACAACCGTCTGTATGTCGGTTGGTTCGGCGTCCTG 169411 |||||||||||| ||||| ||| || |||||||| || | || ||||| ||||| || Sbjct 1920 TTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGCGTTTTG 1861 Query 169412 ATGATCCCCTGCCTGCTGGCAGCAACCACTTGTTTCATCATCGCCTTCATCGGTGCTCCC 169471 |||||||| | | || | ||||| || || || ||||||||||| | |||||| Sbjct 1860 ATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATTGCTGCTCCT 1801 Query 169472 CCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGTTCTCTGATGTATGGTAACAAC 169531 || || || || || || || || ||||| ||| |||| ||||| | ||||| ||||| Sbjct 1800 CCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAAT 1741 Query 169532 ATCATCTCTGGTGCTGTTGTGCCCTCTTCCAACGCAATCGGTCTTCACTTCTATCCCATC 169591 || || || ||||| || | || |||| || || ||| | || || || || || Sbjct 1740 ATTATTTCGGGTGCCATTATTCCTACTTCTGCAGCTATAGGTTTGCATTTTTACCCAATA 1681 Query 169592 TGGGAAGCAGCAAGTCTCGATGAATGGTTGTACAACGGTGGTCCTTTCCAACTGGTTGTC 169651 |||||||||||| | | ||||||||||| ||||| |||||||||| |||| |||| Sbjct 1680 TGGGAAGCAGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAACTAATTGTT 1621 Query 169652 TTCCACTTCCTCATCGGCATCTATGCTTACATGGGTCGTGAGTGGGAATTGTCCTATCGT 169711 | |||||| | | || | | |||||||||||||||||||||| | | ||| Sbjct 1620 CTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGT 1561 Query 169712 CTGGGTATGCGCCCTTGGATCTGTGTTGCTTACTCTGCTCCCGTTGCGGCAGCCTCCGCT 169771 ||||||||||| |||||||| |||||| || || ||||| ||||| || || | ||| Sbjct 1560 CTGGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCT 1501 Query 169772 GTTTTCCTGGTCTACCCGTTTGGGCAAGGGTCGTTCTCTGACGCTATGCCTCTGGGTATC 169831 |||||| || ||||||| |||| ||||| || ||||| | ||||||||| || || Sbjct 1500 GTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAATT 1441 Query 169832 TCGGGAACCTTTAACTACATGCTGGTCTTCCAAGCTGAGCACAACATCCTCATGCACCCC 169891 || || || || |||| |||| | || ||||| ||||||||||||||||| |||||||| Sbjct 1440 TCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCA 1381 Query 169892 TTCCACATGCTTGGTGTTGCGGGAGTGTTTGGTGGGTCTCTGTTTAGCGCGATGCACGGT 169951 || |||||||| || || || || || || || || || || ||||| || ||||| ||| Sbjct 1380 TTTCACATGCTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGT 1321 Query 169952 AGCCTCGTCACTTCGAGTCTTGTCCGTGAAACCACCGAGAACGAGTCCCAGAACTATGGT 170011 | || || || ||| | || | |||||||| || || || || ||| | ||| Sbjct 1320 TCTTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAACGAAGGT 1261 Query 170012 TACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCCGCTCACGGTTACTTCGGT 170071 |||| ||||||||||||||||| || || || ||||| |||||||||||||| || || Sbjct 1260 TACAGATTCGGTCAAGAAGAAGAAACTTATAATATCGTAGCCGCTCACGGTTATTTTGGC 1201 Query 170072 CGCCTGATCTTCCAATACGCTTCCTTCAACAACTCCCGTTCACTGCACTTCTTCCTCGCA 170131 || ||||||||||||| ||| ||||||||||| ||||| | || |||||||| || Sbjct 1200 CGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACATTTCTTCCTAGCT 1141 Query 170132 GCATGGCCTGTTGTTGGCATCTGGTTCACCGCTCTTGGTGTCTCCACGATGGCGTTCAAC 170191 || |||||||| || || ||||||||||| ||| | ||| || ||| ||||| |||||| Sbjct 1140 GCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATCAGCACTATGGCTTTCAAC 1081 Query 170192 CTGAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACACC 170251 || || |||||||| |||||||| || | | ||| |||| || ||||| | ||||| Sbjct 1080 CTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGCCGTGTAATTAACACT 1021 Query 170252 TGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGTAATGCT 170311 ||||| || | | ||||||||| ||||| |||||||| ||||| || ||||||||| Sbjct 1020 TGGGCTGATATCATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCT 961 Query 170312 CACAACTTCCCTCTCGACCTCGCTGCT 170338 ||||| |||||||| ||| | |||||| Sbjct 960 CACAATTTCCCTCTAGACTTAGCTGCT 934 >seq2978 Length=1535 Score = 556 bits (616), Expect = 2e-153 Identities = 675/907 (74%), Gaps = 13/907 (1%) Strand=Plus/Plus Query 169444 TTTCATCATCGCCTTCATCGGTG-CTCCCCCTGTGGACATCGAC-GGCATC-CGCGAACC 169500 ||| || ||||||||||| | || |||| || || || || || || || || ||||| Sbjct 10 TTTTATTATCGCCTTCATTGCTGACTCCTCCAGTAGATATTGATAGGTATTACGTGAACC 69 Query 169501 CG---TTGCTGGTTCTCTGA--TGTATGGTAACAACATCATCTCTGGTGCTGTTGTGCCC 169555 || |||| ||||| | | ||||| ||||| || || || ||||| || | || Sbjct 70 TAGTTTTACTGGATCTCTTACTTTTATGG-AACAATATTATTTCGGGTGCCATTATTCCT 128 Query 169556 TCTTCCAACGCAATCGGTCTTCACTTCTATCCCATCTGGGAAG-CAGCAAGTCTCGA-TG 169613 |||| || || ||| | || || || || || ||||||| ||||| | | || || Sbjct 129 ACTTCTGCAGCTATAGGTTTGCATTTTTACCCAATATGGGAAGGCAGCATCTGTTGAATG 188 Query 169614 AATGGTTGTACAAC-GGTGGTCCTTTCCAACTGGTTGTCTTCCACTTCCTCATCGGCATC 169672 ||||||| ||||| |||||||||| |||| |||| | |||||| | | || | Sbjct 189 AATGGTTATACAATAGGTGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTA 248 Query 169673 TATGCTTACATGGGTCGTGAGTGGGAATTGTCCTATCGTCTGGGTATGCGCCCTTGGATC 169732 | |||||||||||||||||||||| | | |||||||||||||| |||||||| Sbjct 249 GCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGACCTTGGATT 308 Query 169733 TGTGTTGCTTACTCTGCTCCCGTTGCGGCAGCCTCCGCTGTTTTCCTGGTCTACCCGTTT 169792 |||||| || || ||||| ||||| || || | ||||||||| || ||||||| || Sbjct 309 GCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGCTGTTTTCTTGATCTACCCAATT 368 Query 169793 GGGCAAGGGTCGTTCTCTGACGCTATGCCTCTGGGTATCTCGGGAACCTTTAACTACATG 169852 || ||||| || ||||| | ||||||||| || || || || || || |||| |||| Sbjct 369 GGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAATTTCTGGTACTTTCAACTTCATG 428 Query 169853 CTGGTCTTCCAAGCTGAGCACAACATCCTCATGCACCCCTTCCACATGCTTGGTGTTGCG 169912 | || ||||| ||||||||||||||||| |||||||| || |||||||| || || || Sbjct 429 ATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGCTAGGCGTAGCT 488 Query 169913 GGAGTGTTTGGTGGGTCTCTGTTTAGCGCGATGCACGGTAGCCTCGTCACTTCGAGTCTT 169972 || || || || || || || ||||| || ||||| ||| | || || || ||| | Sbjct 489 GGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTG 548 Query 169973 GTCCGTGAAACCACCGAGAACGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGAA 170032 || | |||||||| || || || || ||| | ||||||| ||||||||||||||| Sbjct 549 ATCAGGGAAACCACAGAAAATGAATCTGCTAACGAAGGTTACAGATTCGGTCAAGAAGAA 608 Query 170033 GAGACCTACAACATCGTTGCCGCTCACGGTTACTTCGGTCGCCTGATCTTCCAATACGCT 170092 || || || || ||||| |||||||||||||| || || || ||||||||||||| ||| Sbjct 609 GAAACTTATAATATCGTAGCCGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCT 668 Query 170093 TCCTTCAACAACTCCCGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTTGTTGGCATC 170152 ||||||||||| ||||| | || |||||||| || || |||||||| || || ||| Sbjct 669 AGTTTCAACAACTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATC 728 Query 170153 TGGTTCACCGCTCTTGGTGTCTCCACGATGGCGTTCAACCTGAACGGTTTCAACTTCAAC 170212 |||||||| ||| | ||| || ||| ||||| |||||||| || |||||||| |||||| Sbjct 729 TGGTTCACTGCTTTAGGTATCAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAAC 788 Query 170213 CAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACACCTGGGCAGACGTTCTCAACCGT 170272 || || | | ||| |||| || ||||| | ||||| ||||| || | | |||||| Sbjct 789 CAATCAGTAGTTGATAGTCAAGGCCGTGTAATTAACACTTGGGCTGATATCATTAACCGT 848 Query 170273 GCTGGTCTTGGCATGGAAGTGATGC-ACGAGCGTAATGCTCACAACTTCCCTCTCGACCT 170331 ||| ||||| |||||||| |||| | || |||||||||||||| |||||||| ||| | Sbjct 849 GCTAACCTTGGTATGGAAGTTATGCAATGAACGTAATGCTCACAATTTCCCTCTAGACTT 908 Query 170332 CGCTGCT 170338 |||||| Sbjct 909 AGCTGCT 915 >seq20016 Length=17894 Score = 551 bits (610), Expect = 6e-152 Identities = 744/1026 (73%), Gaps = 13/1026 (1%) Strand=Plus/Plus Query 170594 GTTCGATGTCCTGGATGACTGGCTTAAACGT---GATCGGTTTGTATTTGTGGGCTGGTC 170650 ||| ||| | ||||||||||| | |||| || || || || ||||| |||||||| Sbjct 13766 GTTTGATATTATGGATGACTGGTT---ACGTAGGGACCGTTTCGTTTTTGTAGGCTGGTC 13822 Query 170651 TGGACTTCTT-CTTTTTCCCACTGCTTATCTTGCAATTGGCGGCTGGCTTACGGGCACGA 170709 || ||| || || ||||| ||| ||| | || | || || ||| | ||||| || | Sbjct 13823 CGG-CTTATTGCTCTTTCCTTGTGCCTATTTCGCTGTAGGGGGTTGGTTCACGGGTACAA 13881 Query 170710 CATTTGTTACAAGTTGGTACACCCACGGACTTGCAAGTTCGTACCTTGAAGG-TGCTAAT 170768 | ||||| || ||||| ||||| ||| | || ||||| || | ||||| ||| ||| Sbjct 13882 CCTTTGTAACTTCATGGTATACCCATGGATTGGCCAGTTCCTATTTGGAAGGCTGC-AAT 13940 Query 170769 TTCCTTACAGCGGCTGTGTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTT 170828 ||| | || || || || || || |||||| || | | | |||||| | | |||| Sbjct 13941 TTCTTAACTGCTGCGGTTTCTACTCCTGCTAATAGTTTAGCACATTCTTTATTATTACTA 14000 Query 170829 TGGGGTCCTGAGTCTCAGGGGGATTTCCAACGCTGGTTACAACTTGGGGGACTCTGGAAT 170888 ||||||||||| | || || ||||| || |||| ||| | || || || |||| | Sbjct 14001 TGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACT 14060 Query 170889 TTTGTGGCGCTCCACGGAGCCTTTGCTCTCATAGGTTTCATGCTTCGGCAGTTTGAAATC 170948 ||||| || |||||||| || || | || |||||||||||| | || || || ||| | Sbjct 14061 TTTGTTGCTCTCCACGGTGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTCGAACTT 14120 Query 170949 AGTCG-TCTCGTAGGGATTAGACCGTACAATGCAATCGCTTTCTCTGGTCCTATCGCTGT 171007 ||| ||| || | | || || ||||||||||| ||||||||||| || || || Sbjct 14121 GCTCGATCT-GTTCAATTGCGCCCTTATAATGCAATCGCATTCTCTGGTCCAATTGCCGT 14179 Query 171008 GTTTGTCAGCGTGTTCCTCATCTATCCTCTTGGGCAGTCAAGTTGGTTCTTCGCACCTTC 171067 ||||| || ||||| || ||||| || || ||||| |||||||||| || ||| Sbjct 14180 TTTTGTTTCTGTATTCCTGATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCTAG 14239 Query 171068 CTTTGGAGTTGCAGCAATCTTCCGCTTCCTGCTCTTCCTGCAAGGTTTCCACAACTGGAC 171127 ||||| || ||||| || || || || | ||||| | ||||| || || |||||||| Sbjct 14240 TTTTGGTGTAGCAGCTATATTTCGATTTATCCTCTTTTTTCAAGGATTTCATAACTGGAC 14299 Query 171128 ACTGAATCC-ATTTCATATGATGGGTGTTGCAGGTATCCTCGGCGGTGCATTGCTTTCTG 171186 | |||| || ||||||||||||||| ||||| ||| | | |||| ||| ||||| | | Sbjct 14300 ATTGAACCCCATTTCATATGATGGGAGTTGCTGGTGTATTGGGCGCTGCTTTGCTATGCG 14359 Query 171187 CAATTCATGGTGTTACAGTAGAGAATACTTTGTATGAAGATGGTGATCAAGCAAACACCT 171246 | |||||||||| ||| ||||| |||||||| | ||||||||||||| ||||| || | Sbjct 14360 CTATTCATGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGCGCAAATACAT 14419 Query 171247 TTAAGGCATTTGACACGACTCAGGAGGAAGAGACATATTCTATGGTCACTGCTAATCGTT 171306 | || ||| || | ||||| | ||||| || ||||| |||||||| |||||||| | Sbjct 14420 TCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCT 14479 Query 171307 TCTGGTCGCAGATTTTTGGTATCGCGTTCAGCAATAAGCGTTGGTTGCATTTCTTTATGC 171366 | ||||| || || ||||| | || || |||||| |||||||| |||||||||||| Sbjct 14480 TTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGT 14539 Query 171367 TGTTTGTTCCTGTCATGGGTCTTTGGGTCAGTAGTCTGGGGATTATTGGTCTTGCTCTTA 171426 | ||||| || || | ||| | ||| | ||| ||| || | | ||| | || | | Sbjct 14540 TATTTGTACCGGTAACTGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTTTGGCCTTGA 14599 Query 171427 ATCTTAGGGCTTATGATTTCGTAAGTCAGGAGGTCAGAGCAGCAGAAGATCCAGAGTTCG 171486 | || | || ||||| ||||| |||||| | | || || |||||||| || || | Sbjct 14600 ACCTACGTGCCTATGACTTCGTTTCTCAGGAAATTCGCGCGGCGGAAGATCCTGAATTTG 14659 Query 171487 AGACGTTCTATACCAAGAACATCCTATTGAATGAAGGTCTTCGTGCATGGATGGCACCAG 171546 |||| ||||| ||||| || || ||||| || |||||| ||||||| |||||||| | Sbjct 14660 AGACTTTCTACACCAAAAATATTCTATTAAACGAAGGTATTCGTGCTTGGATGGCGGCTC 14719 Query 171547 TAGACCAACCACATGAAAACTTTGTGTTCCCAGAGGAAGTTCTACCTCGTGGCAATGCAC 171606 ||| || || ||||||||| || | ||||| ||||| |||||||| ||||| || || | Sbjct 14720 AAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTC 14779 Query 171607 TTTGAT 171612 ||| || Sbjct 14780 TTTAAT 14785 >seq2990 Length=15620 Score = 437 bits (484), Expect = 1e-117 Identities = 527/714 (74%), Gaps = 2/714 (0%) Strand=Plus/Plus Query 169352 TTCTGTAACTGGGTAACCTCCACTGACAACCGTCTGTATGTCGGTTGGTTCGGCGTCCTG 169411 |||||||||||| ||||| ||| || |||||||| || | || ||||| ||||| || Sbjct 14830 TTCTGTAACTGGATAACCAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGCGTTTTG 14889 Query 169412 ATGATCCCCTGCCTGCTGGCAGCAACCACTTGTTTCATCATCGCCTTCATCGGTGCTCCC 169471 |||||||| | | || | ||||| || || || ||||||||||| | |||||| Sbjct 14890 ATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATTGCTGCTCCT 14949 Query 169472 CCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGTTCTCTGATGTATGGTAACAAC 169531 || || || || || || || || ||||| ||| |||| ||||| | ||||| ||||| Sbjct 14950 CCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAAT 15009 Query 169532 ATCATCTCTGGTGCTGTTGTGCCCTCTTCCAACGCAATCGGTCTTCACTTCTATCCCATC 169591 || || || ||||| || | || |||| || || ||| | || || || || || Sbjct 15010 ATTATTTCGGGTGCCATTATTCCTACTTCTGCAGCTATAGGTTTGCATTTTTACCCAATA 15069 Query 169592 TGGGAAGCAGCAAGTCTCGATGAATGGTTGTACAACGGTGGTCCTTTCCAACTGGTTGTC 169651 |||||||||||| | | ||||||||||| ||||| |||||||||| |||| |||| Sbjct 15070 TGGGAAGCAGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAACTAATTGTT 15129 Query 169652 TTCCACTTCCTCATCGGCATCTATGCTTACATGGGTCGTGAGTGGGAATTGTCCTATC-G 169710 | |||||| | | || | | |||||||||||||||||||| | | | || | Sbjct 15130 CTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGGAACTTAGTTTCCG 15189 Query 169711 TCTGGGTATGCGCCCTTGGATCTGTGTTGCTTACTCTGCTCCCGTTGCGGCAGCCTCCGC 169770 |||||||||||| |||||||| |||||| || || ||||| ||||| || || | || Sbjct 15190 TCTGGGTATGCGACCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCGACTGC 15249 Query 169771 TGTTTTCCTGGTCTACCCGTTTGGGCAAGGGTCGTTCTCTGACGCTATGCCTCTGGGTAT 169830 ||||||| || ||||||| |||| ||||| || ||||| | ||||||||| || || Sbjct 15250 TGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGAAT 15309 Query 169831 CTCGGGAACCTTTAACTACATGCTGGTCTTCCAAGCTGAGCACAACATCCTCATGCACCC 169890 || || || || |||| |||| | || ||||| ||||||||||||||||| |||||||| Sbjct 15310 TTCTGGTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCC 15369 Query 169891 CTTCCACATGCTTGGTGTTGCGGGAGTGTTTGGTGGGTCTCTGTTTAGCGCGATGCACGG 169950 || |||||||| || || || || || || || || || || ||||| || ||||| || Sbjct 15370 ATTTCACATGCTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGG 15429 Query 169951 TAGCCTCGTCACTTCGAGTCTTGTCCGTGAAACCACCGAGAACGAGTCCCAGAACTATGG 170010 | | || || || ||| | || | |||||||| || || || || ||| | || Sbjct 15430 TTCTTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAACGAAGG 15489 Query 170011 TTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCCGCTC-ACGGTT 170063 ||||| ||||||||||||||||| || || || ||||| ||||||| |||||| Sbjct 15490 TTACAGATTCGGTCAAGAAGAAGAAACTTATAATATCGTAGCCGCTCTACGGTT 15543 >seq2982 Length=1363 Score = 214 bits (236), Expect = 2e-50 Identities = 287/393 (73%), Gaps = 5/393 (1%) Strand=Plus/Minus Query 171223 AAGATGGTGATCAAGCAAACACCTTTAAGGCATTTGACACGACTCAGGAG-GAAGAGACA 171281 ||||||||||| ||||| || || || ||| || | ||||| || ||||| || Sbjct 1357 AAGATGGTGATGGCGCAAATACATTCCGTGCTTTTAACCCAACTCAAGACTGAAGAAACT 1298 Query 171282 TATTCTA-TGGTC-ACTGCTAATCGTTTCTGGTCGCAGATTTTTGGTATCGCGTTCAGCA 171339 ||||||| ||||| || ||||||||| | ||||| || || ||||| | || || | Sbjct 1297 TATTCTAATGGTCTACCGCTAATCGTCTTTGGTC-CA-ATCTTTGGGGTTGCTTTTCCTA 1240 Query 171340 ATAAGCGTTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTCATGGGTCTTTGGGTCAGTA 171399 |||| |||||||| |||||||||||| | ||||| || || | ||| | ||| | ||| Sbjct 1239 ATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTG 1180 Query 171400 GTCTGGGGATTATTGGTCTTGCTCTTAATCTTAGGGCTTATGATTTCGTAAGTCAGGAGG 171459 ||| || | | ||| | || | || || | || ||||| ||||| |||||| Sbjct 1179 CTCTTGGAGTAGTCGGTTTGGCCTTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAAA 1120 Query 171460 TCAGAGCAGCAGAAGATCCAGAGTTCGAGACGTTCTATACCAAGAACATCCTATTGAATG 171519 | | || || |||||||| || || ||||| ||||| ||||| || || ||||| || | Sbjct 1119 TTCGCGCGGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTATTAAACG 1060 Query 171520 AAGGTCTTCGTGCATGGATGGCACCAGTAGACCAACCACATGAAAACTTTGTGTTCCCAG 171579 ||||| ||||||| |||||||| | ||| || || ||||||||| || | ||||| | Sbjct 1059 AAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTG 1000 Query 171580 AGGAAGTTCTACCTCGTGGCAATGCACTTTGAT 171612 |||| |||||||| ||||| || || |||| || Sbjct 999 AGGAGGTTCTACCCCGTGGAAACGCTCTTTAAT 967 >seq15940 Length=20296 Score = 194 bits (214), Expect = 2e-44 Identities = 247/335 (74%), Gaps = 4/335 (1%) Strand=Plus/Plus Query 171282 TATTCTATGGTCACTGCTAATCGTTTCTGGTCGCAGATTTTTGGTATCGCGTTCAGCAAT 171341 ||||| |||||||| |||||||| || ||||| || || ||||| | || || |||| Sbjct 19769 TATTCAATGGTCACCGCTAATCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAAT 19828 Query 171342 AAGCGTTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTCATGGGTCTTTGGGTCAGTAGT 171401 || |||||||| |||||||||||| | ||||| || || | ||| | ||| | ||| | Sbjct 19829 AAACGTTGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGCT 19888 Query 171402 CTGGGGATTA-TTGGTCTTGCTCTTAATCTTAGGGCTTATGATTTCGTAAGTCAGGAGGT 171460 || ||| || | ||| | || | || || | || ||||| ||||| |||||| | Sbjct 19889 CTTTGGAGTAGTCGGTTTGGCCTTGAACCTACGTGCCTATGACTTCGTTTCTCAGGAAAT 19948 Query 171461 CAGAGCAGCAGAAGATCCAG-AGTTCGAGACGTTCTATACC-AAGAACATCCTATTGAAT 171518 | || || |||||||| | | || ||||| ||||| ||| || || || ||||| || Sbjct 19949 TCGCGCGGCGGAAGATCCTGAATTTTGAGACTTTCTACACCAAAAAATATTCTATTAAAC 20008 Query 171519 GAAGGTCTTCGTGCATGGATGGCACCAGTAGACCAACCACATG-AAAACTTTGTGTTCCC 171577 |||||| ||||||| |||||||| | ||| || || |||| ||||| || | ||||| Sbjct 20009 GAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAAACCTTATATTCCC 20068 Query 171578 AGAGGAAGTTCTACCTCGTGGCAATGCACTTTGAT 171612 ||||| |||||||| ||||| || || |||| || Sbjct 20069 TGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAAT 20103 >seq7755 Length=16682 Score = 129 bits (142), Expect = 7e-25 Identities = 187/264 (71%), Gaps = 9/264 (3%) Strand=Plus/Plus Query 171168 GGCGGTGCATTGCTTTCTGCAATTCATGGTGTTACAGTAGAGAATACTTTGTATGAAGAT 171227 |||| || |||| | || ||||| |||| ||| ||| | |||||||| | ||||||| Sbjct 3561 GGCGCAGCTTTGCCATGCGCTATTCAGGGTGCTACCGTATAAAATACTTTATTTGAAGAT 3620 Query 171228 GGTGATCAAGCAAACACCTTTAAGGCATTTGACACGACTCAGGAGGAAGAGACATATTCT 171287 |||||| ||||| || || || ||| || | ||||| | ||||| || ||||| Sbjct 3621 GGTGATGGCGCAAATACATTCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCA 3680 Query 171288 ATGGTCACTGCTAATCGTTTCTGGTCGCAGATTTTTGGTATCGCGTTCAGCAATAAGCGT 171347 ||||||||||||||||| || ||||| | || | || || |||||| ||| Sbjct 3681 ATGGTCACTGCTAATCGCTTTTGGTCCC--------GGGGTTGCTTTTTCCAATAAACGT 3732 Query 171348 TGGTTGCATTTCTTTATGCTGTTTGTTCCTGTCATGGGTCTTTGGGTCAGTAGTCTGGGG 171407 ||||| |||||||||||| | ||||| || || | ||| | ||| | ||| ||| || Sbjct 3733 TGGTTACATTTCTTTATGTTATTTGTACCGGTAACTGGTTTATGGATGAGTGCTCTTGGA 3792 Query 171408 ATTATTGGTCTTGCTCTTAATCTT 171431 | | ||||| || ||| | ||| Sbjct 3793 GTAGTCGGTCTGGC-CTTGAACTT 3815 >seq13577 Length=50240 Score = 114 bits (126), Expect = 2e-20 Identities = 241/366 (66%), Gaps = 35/366 (10%) Strand=Plus/Minus Query 171177 TTGCTTTCTGCAATTCATGGTGTTACAGTAGAGAATACTTTGTATGAAGATGGTGATCAA 171236 ||||| | || |||||||||| ||| ||||| |||||||| | ||||||||||||| | Sbjct 19499 TTGCTATGCGCTATTCATGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGAC 19440 Query 171237 GCAAACACCTTTAAGGCATTTGACACGACTCAGGAGGAAGAGACATATTCTATGGTCACT 171296 || ||| || | | ||| || | ||||| | ||||| || ||||| ||||| ||| Sbjct 19439 GCTTACA--TTCCATGTTTTTAACTCAACTCAAGCTGAAGAAACTTATTCAATGGTGACT 19382 Query 171297 GCTAATCGTTTCTGGTCGCAGATTTTTGGTATCGCGTTCAGCAATAAGCGTTGGTTGCAT 171356 ||| |||| |||||| |||||||| ||| Sbjct 19381 GCTT----TTTC-----------------------------CAATAAACGTTGGTTACAT 19355 Query 171357 TTCTTTATGCTGTTTGTTCCTGTCATGGGTCTTTGGGTCAGTAGTCTGGGGATTATTGGT 171416 |||||||| | ||||| || || | ||| | ||| | | | ||| || | | || Sbjct 19354 TTCTTTATCTTATTTGTACCGGTAACTGGTTTATGGATGAATGCTCTTGGAGTAGTCAGT 19295 Query 171417 CTTGCTCTTAATCTTAGGGCTTATGATTTCGTAAGTCAGGAGGTCAGAGCAGCAGAAGAT 171476 | || |||| || | || ||||| ||||| |||||| | | | || ||||| Sbjct 19294 TTGGCCTTTAACCTACGTGCCTATGACTTCGTTTCTCAGGAAATTCGCGTGGCGAAAGAT 19235 Query 171477 CCAGAGTTCGAGACGTTCTATACCAAGAACATCCTATTGAATGAAGGTCTTCGTGCATGG 171536 || || || ||||| || || ||||| || || ||||| || ||||| || |||| ||| Sbjct 19234 CCTGAATTTGAGACTTTATACACCAAAAATATTCTATTAAACGAAGGAATTGGTGCTTGG 19175 Query 171537 ATGGCA 171542 |||||| Sbjct 19174 ATGGCA 19169 >seq6618 Length=24737 Score = 105 bits (116), Expect = 8e-18 Identities = 90/111 (81%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 171123 TGGACACTGAATCCATTTCATATGATGGGTGTTGCAGGTATCCTCGGCGGTGCATTGCTT 171182 |||||| |||| ||||||||||||||||| ||||| ||| | | |||| ||| ||||| Sbjct 24100 TGGACATTGAACCCATTTCATATGATGGGAGTTGCTGGTGTATTGGGCGCTGCTTTGCTA 24041 Query 171183 TCTGCAATTCATGGTGTTACAGTAGAGAATACTTTGTATGAAGATGGTGAT 171233 | | |||||||||| ||| |||| |||||||| | ||||||||||||| Sbjct 24040 TGCACTATTCATGGTGCTACCATAGAAAATACTTTATTTGAAGATGGTGAT 23990 >seq12569 Length=659 Score = 95.1 bits (104), Expect = 1e-14 Identities = 177/252 (70%), Gaps = 11/252 (4%) Strand=Plus/Plus Query 170594 GTTCGATGTCCTGGATGACTGGCTTAAACGT---GATCGGTTTGTATTTGTGGGCTGGTC 170650 ||| ||| | ||||||||||| | |||| || || || || ||||| |||||||| Sbjct 382 GTTTGATATTATGGATGACTGGTT---ACGTAGGGACCGTTTCGTTTTTGTAGGCTGGTC 438 Query 170651 TGGACTTCTT-CTTTTTCCCACTGCTTATCTTGCAATTGGCGGCTGGCTTACGGGCACGA 170709 || ||| || || ||||| ||| ||| | || | || || ||| | ||||| || | Sbjct 439 CGG-CTTATTGCTCTTTCCTTGTGCCTATTTCGCTGTAGGGGGTTGGTTCACGGGTACAA 497 Query 170710 CATTTGTTACAAGTTGGTACACCCACGGACTTGCAAGTTCGTACCTTGAAGG-TGCTAAT 170768 | ||||| || ||||| ||||| ||| | || ||||| || | ||||| ||| ||| Sbjct 498 CCTTTGTAACTTCATGGTATACCCATGGATTGGCCAGTTCCTATTTGGAAGGCTGC-AAT 556 Query 170769 TTCCTTACAGCGGCTGTGTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACT- 170827 ||| | || || || || || || |||||| || | | | |||||| | | |||| Sbjct 557 TTCTTAACTGCTGCGGTTTCTACTCCTGCTAATAGTTTAGCACATTCTTTATTATTACTA 616 Query 170828 TTGGGGTCCTGA 170839 ||||||||||| Sbjct 617 GTGGGGTCCTGA 628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592049795214000