Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conyza_20canadensis_20[genbank_20GCA_5F000775935.1_202014-11-13] 20,075 sequences; 326,165,195 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq3314 100 3e-16 >seq3314 Length=31422 Score = 100 bits (110), Expect = 3e-16 Identities = 166/240 (69%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 23703 CCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTT 23762 |||||| |||||| || |||||| ||| |||||||| || || || | || Sbjct 22890 CCAATTGGCCTTCTTTTGAACACACGGAATAGTTTCAATAGCACGAAACAGCCTGCTCTT 22949 Query 23763 TTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATT 23822 ||| | ||| | ||||| | || | || |||||||||||||| ||||| ||||| Sbjct 22950 TTCACTAGAATCCTTAATATAAGATTCCAAAAGCAAACTATACATTTCCGAATGGATATT 23009 Query 23823 TTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAA 23882 ||||| |||||||||||||| |||||| | || || | | || | || || | Sbjct 23010 CTCAATGGCAATCTGAAACCCGTAAAAAGCACGTGCCTCGGCGATCTGTATCTCTTTCAT 23069 Query 23883 AAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAAC 23942 ||| ||| ||| |||||||| |||||| ||||| || || || || || ||||| Sbjct 23070 AAACCTTGAAGCCAAATTTTCCAAAACAATTCCATCTGATGCGGCGAAAAATGCGAGAAC 23129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521357139105000