Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cucumis_20melo_20[refseq_20GCF_5F000313045.1_202012-10-05] 31,464 sequences; 374,928,489 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 1e-12 >seq1 Length=8341428 Score = 87.8 bits (96), Expect = 1e-12 Identities = 142/202 (70%), Gaps = 8/202 (4%) Strand=Plus/Plus Query 33173 GTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG----TCATCCAATTGCTT 33228 || || || || |||||||||||||| | ||| | ||| | || || | |||||| Sbjct 3817646 GTAGATTCCTTCTGTATATTGTAATCGG-CAA---GGGTTCGGCCGTCCTCAAGTTGCTT 3817701 Query 33229 TCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTAATCGCCTG 33288 |||| || || | |||||||||||||| ||| || ||||| || || |||| Sbjct 3817702 TCCAGCGAAGATGAGACGTTGCTGGTCCGGGGGAATTCCTTCCTTATCCTGAATCTTGGC 3817761 Query 33289 TTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAG 33348 ||| || | | ||| |||||| | | || || || || ||||| ||||| ||||| Sbjct 3817762 TTTAACGTTGTCAATAGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTTCCGGTAAG 3817821 Query 33349 AGTTTTTACGAAAATTTGCATG 33370 |||||||| || || |||||| Sbjct 3817822 TGTTTTTACAAAGATCTGCATG 3817843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318655359150672