Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cucumis_20melo_20[refseq_20GCF_5F000313045.1_202012-10-05] 31,464 sequences; 374,928,489 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq32 91.5 1e-13 seq1 82.4 6e-11 >seq32 Length=4239389 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 19999 CACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTC 20058 ||||||||| ||||||||||| ||||| || ||||||||| | | ||| || || Sbjct 977305 CACCAAATGGAGTGTAGATTCCTTTTGGATATTGTAATCGGCAAGCGTTCGGCCGTCCTC 977364 Query 20059 CAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGC 20118 | ||| || || ||| | |||||||||||||| ||| || | ||| ||||| || Sbjct 977365 AAGTTGCTTACCAGCAAAGATAAGCCTCTGTTGGTCGGGTGGAATGCCCTCTTTATCTTG 977424 Query 20119 AATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTT 20178 ||| ||| || || | | ||| | ||| |||| || | ||| || ||||| Sbjct 977425 AATCTTTGCCTTAACATTGTCAATTGTATCAGAGCTTTCCACCTCGAGGGTGATTGTTTT 977484 Query 20179 GCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 ||| || | ||||| || || |||||||| Sbjct 977485 GCCAGTGAGAGTTTTTACGAATATTTGCAT 977514 >seq1 Length=8341428 Score = 82.4 bits (90), Expect = 6e-11 Identities = 150/216 (69%), Gaps = 3/216 (1%) Strand=Plus/Plus Query 19996 CAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATC 20055 |||||| | ||| || || || || || || ||||||||||| | | |||| ||| Sbjct 3816959 CAACACAAGATGGAGGGTCGACTCCTTCTGGATGTTGTAATCTGCAAGAGTTCGGCCATC 3817018 Query 20056 TTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATC-GACGGGCACGCCTTCTTTGT 20114 |||||| ||||| || || | ||||| ||||| || || | ||| | |||||| |||| Sbjct 3817019 TTCCAACTGTTTCCCAGCGAAGATAAGTCTCTGCTGGTCTGGGGGGAATGCCTTCCTTGT 3817078 Query 20115 CGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGG 20174 | ||| || ||||| | | ||| | || || || |||| ||| |||| Sbjct 3817079 CCTGAATCTTAGCCTTCACGTTGTCAATTGTGTCAGAAGACTCAACCTCCAAGGTGATGG 3817138 Query 20175 TTTTGCCGGTCA-ACGTTTTGAC-AAAAATTTGCAT 20208 | || ||||| | | ||||||| |||||||||||| Sbjct 3817139 TCTTCCCGGTGAGAGTTTTTGACAAAAAATTTGCAT 3817174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419426301945384