Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cucumis_20melo_20[refseq_20GCF_5F000313045.1_202012-10-05] 31,464 sequences; 374,928,489 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq23 125 8e-24 >seq23 Length=5684809 Score = 125 bits (138), Expect = 8e-24 Identities = 298/444 (67%), Gaps = 20/444 (5%) Strand=Plus/Minus Query 21185 TTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGAT 21244 ||||| || || | ||||||||| || || ||||| ||||| |||| ||| || || | Sbjct 1473735 TTTTGGTATTCCCCAACTCTTTTCTCAAAGAAATTAGTCTTCCCTTGCAACGAAATCAAC 1473676 Query 21245 TCCATAAAATCAAATGGATTTTCAGATTTAAATATTTTATTACAACCCAGTTCTGATAAT 21304 ||||| |||||||||| |||| | ||| | ||||| | | |||| | | | Sbjct 1473675 TCCATCCAATCAAATGGGTTTTGAACATTATAGATTTTCTCGTACCCCAATGTTCCAACC 1473616 Query 21305 AATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATCAAT 21364 || ||||| || |||||||| || ||||||| ||| || || | |||||| || | | Sbjct 1473615 AACCTATCCGCCACAAATTCAATGTATTGACTCATCAAATCTCCATTCATTCCAACAAGA 1473556 Query 21365 TTTACAGGAAGAGCTTTTGTCAAAAAAGATTTT----TCTATAGAGACGGCTTC---AAC 21417 || || | ||| | || ||| || || |||||| ||||| || ||| Sbjct 1473555 GCCACCGGCAAAGCAT----CACAAACGAATTCCCTCTCTATATCCACGGCCTCCGTAAC 1473500 Query 21418 AATTATATTTATT--ATCCTAGATGTACTAGGGGGATACAATAATTGTTTAAACATCAAA 21475 ||| | | | ||||| | | | ||| ||| | ||| |||| Sbjct 1473499 AATCTGCCTCACTCGATCCTCACTCAATTTCTTCCT--CAACAATGAAT---ACAACAAA 1473445 Query 21476 CATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAA 21535 || |||||||||||||| | ||||||||| | || ||||| || || || || || Sbjct 1473444 CAAGCAAAATCACAATGAAGACCTTCATCTCGTGAAATCAATTCGTTTGAGAACGTCAAT 1473385 Query 21536 CCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCT-CCTGAAAAGAA 21594 || |||||||| || | ||||| ||||| || || || ||| | || ||||| ||||| Sbjct 1473384 CCAGGCATTAACCCACGTTTTTTCAACCAGAAAATAGA-GCAGAAACTACCTGAGAAGAA 1473326 Query 21595 AATGCCCTCAACGGCAGCAAATGC 21618 ||| ||||| ||| ||||||||| Sbjct 1473325 AATTCCCTCGACGCAAGCAAATGC 1473302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531691603415360