Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cucumis_20melo_20[refseq_20GCF_5F000313045.1_202012-10-05] 31,464 sequences; 374,928,489 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq78 89.7 4e-13 seq1 89.7 4e-13 >seq78 Length=1515738 Score = 89.7 bits (98), Expect = 4e-13 Identities = 161/232 (69%), Gaps = 5/232 (2%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAG--TCC 115342 ||||||||||||||| ||||| | ||||||||| | || || | ||| ||| | | Sbjct 1185108 AATGCAAATTTTTGTGAAAACTTTAACGGGAAAA-CAATCACTTTGGAAGTTGAGAGTTC 1185050 Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402 || ||| | || | || || || ||| ||||||||||| |||| || Sbjct 1185049 AGATACAAT--TGATAATGTTAAGGCTAAGATTCAAGATAAAGAAGGGATCCCACCAGAC 1184992 Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462 || || ||| | |||| || || || ||||| ||||||| | || | ||||| ||| Sbjct 1184991 CAACAGAGATTGATTTTCGCTGGTAAGCAATTGGAAGATGGTAGGACTCTAGCCGACTAT 1184932 Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 ||||||||||| || || ||| | || |||||||| | | || ||||||| Sbjct 1184931 AACATTCAAAAGGAATCAACTCTCCACTTGGTGTTGCGTCTTCGTGGAGGAA 1184880 >seq1 Length=8341428 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||||||||||||||| || || || ||||| || || ||| |||| ||||||| | Sbjct 3817614 ATGCAAATTTTTGTCAAGACTCTTACCGGAAAGACTATCACCCTCGAGGTGGAGTCCTCC 3817555 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || || ||| | || || || || ||||| ||||| | ||| || ||| Sbjct 3817554 GATACCATTGATAACGTCAAGGCCAAGATCCAGGATAAGGAAGGTATTCCCCCAGACCAG 3817495 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||||||||||| | || || || || || || |||| ||| | || ||||| ||| Sbjct 3817494 CAAAGACTTATCTTCGCCGGAAAGCAGTTGGAGGATGGACGAACTCTTGCTGATTACAAC 3817435 Query 115466 ATTCAAAAAGAGTCTACTATACAT 115489 || || || || |||||| | ||| Sbjct 3817434 ATCCAGAAGGAATCTACTCTTCAT 3817411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425180894399680