Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cucumis_20melo_20[refseq_20GCF_5F000313045.1_202012-10-05] 31,464 sequences; 374,928,489 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq23 134 3e-26 >seq23 Length=5684809 Score = 134 bits (148), Expect = 3e-26 Identities = 367/557 (66%), Gaps = 9/557 (2%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| ||||||||||| || | |||| |||||||||||| ||| | || || Sbjct 1472894 ATCTGGGAGATGTACAAGAAAGCCCTAGCCTCCTTCTGGACCGCCGAAGAGGTCGATCTC 1472953 Query 42360 GC-CAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAAGTTTTTCCTCAAAAA 42418 | |||| | | ||| ||||| || | || |||| || ||| ||| | Sbjct 1472954 TCACAAGACCTCCGCCAT-TGGGATTCCTTAACTTCCGACGAGAAACACTTCATCACTTA 1473012 Query 42419 CATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTT 42478 | | || |||||||||||||||||||| || || || |||||||| ||| |||| Sbjct 1473013 CGTCCTTGCCTTCTTCGCCGCCTCTGATGGTATCGTTTTGGAGAACCTTGCCGGACGGTT 1473072 Query 42479 CATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGA 42538 ||||||||| || || | ||| || | |||||| || || || || || || Sbjct 1473073 CATGAAAGAAGTCCAAGTCGCTGAAGCCAGAGCCTTCTATGGATTTCAAATTTGTATTGA 1473132 Query 42539 GAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGA 42598 |||| | || |||||| |||| || || | || || ||| |||| || || Sbjct 1473133 GAACATTCATTCTGAGATGTATAGTCTTCTCCTTGAAACTTATATCAAGGATTCCAGTGA 1473192 Query 42599 GCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTG 42658 | || ||||||| | || || || || | || || | ||||||||||| || || Sbjct 1473193 GAAGAATCGGCTGTTTCATGCTATTGATACTGTCCCATGTGTGAAGAAGAAGGCCGATTG 1473252 Query 42659 GGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTAC 42718 |||| | || ||||| || || | ||| || || | ||| || | | || ||| | Sbjct 1473253 GGCGTTGAAGTGGATTGATAGCACGGACTCA---TTTGCTGAGCGGATTTTGGCATTTGC 1473309 Query 42719 CGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAA 42778 ||||||||| || |||||||| || ||| ||| || |||||| | || | || Sbjct 1473310 TTGCGTCGAGGGAATTTTCTTCTCAGGTAGTTTCTGCTCTATTTTCTGGTTGAA--AAAA 1473367 Query 42779 GGT--GTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTG 42836 || || ||||| ||| | || ||||| |||||| | || | || || || || Sbjct 1473368 CGTGGGTTAATGCCTGGATTGACGTTCTCAAACGAATTGATTTCACGAGATGAAGGTCTT 1473427 Query 42837 CATAGGGACTTTGCCTG 42853 ||| | || ||||| || Sbjct 1473428 CATTGTGATTTTGCTTG 1473444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 943967791392640