Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cucumis_20melo_20[refseq_20GCF_5F000313045.1_202012-10-05] 31,464 sequences; 374,928,489 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq23 134 2e-26 >seq23 Length=5684809 Score = 134 bits (148), Expect = 2e-26 Identities = 317/473 (67%), Gaps = 17/473 (4%) Strand=Plus/Minus Query 37168 ACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAA 37227 |||| ||||| |||||||||||||| | ||||||||||| |||||||| || || | Sbjct 1473452 ACAACAAACAAGCAAAATCACAATGAAGACCTTCATCTCGTGAAATCAATTCGTTTGAGA 1473393 Query 37228 AGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCA-AAAGATCCA 37286 | || ||||| |||||||| || | |||||| | ||| || || | ||| ||| || Sbjct 1473392 ACGTCAATCCAGGCATTAACCCACGTTTTTTCAACCAGAAAATAG-AGCAGAAACTACCT 1473334 Query 37287 GAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAA--AGT-TGAA 37343 || |||||||| || || || |||||||| | || || | | || ||| | Sbjct 1473333 GAGAAGAAAATTCCCTCGACGCAAGCAAATGCCAAAATCCGCTCAGCAAATGAGTCCGTG 1473274 Query 37344 CTATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTT 37403 |||| |||||| || | |||||| ||||| || |||||| | || Sbjct 1473273 CTAT------CAATCCACTTCAACGCCCAATCGGCCTTCTTCTTCACACATGGGACAGTA 1473220 Query 37404 TCAATTGCTTTTAAGAGAAAGtttttttCTTCACT---ATCTGTTATATAAGTATCAATT 37460 ||||| || | || || || || ||||| ||| | |||||||| |||| Sbjct 1473219 TCAATAGCATGAAACAGCCGATTCTT---CTCACTGGAATCCTTGATATAAGTTTCAAGG 1473163 Query 37461 AGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACAC 37520 || | ||||||||| ||||| ||||| || |||||| || ||||| ||||| || Sbjct 1473162 AGAAGACTATACATCTCAGAATGAATGTTCTCAATACAAATTTGAAATCCATAGAAGGCT 1473103 Query 37521 CTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATC 37580 || ||||||| | ||| || || || | |||| || | ||| || ||| || Sbjct 1473102 CTGGCTTCAGCGACTTGGACTTCTTTCATGAACCGTCCGGCAAGGTTCTCCAAAACGATA 1473043 Query 37581 CCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATC 37633 |||||| || || ||||| ||||| || || | || || ||| | || || Sbjct 1473042 CCATCAGAGGCGGCGAAGAAGGCAAGGACGTAAGTGATGAAGTGTTTCTCGTC 1472990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592083841802560