Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cucumis_20melo_20[refseq_20GCF_5F000313045.1_202012-10-05] 31,464 sequences; 374,928,489 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq21 86.0 1e-11 >seq21 Length=5552556 Score = 86.0 bits (94), Expect = 1e-11 Identities = 111/150 (74%), Gaps = 5/150 (3%) Strand=Plus/Minus Query 304989 AAGGTAAAG-AGGGTCGTATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTGCA 305047 |||| |||| | || || || |||| ||| | |||||||||||||| |||||| ||| Sbjct 392986 AAGGCAAAGGAAGGCCGGATAAGAGGAAATTTGATGGGAAAACGTGTAGATTTTTCAGCA 392927 Query 305048 AGAAGTGTAATCACACCTGATTCTCAAATTAGTCTTCATGAATTAGGAGTTCCAATTGAA 305107 ||| ||| || ||||||||| | |||| | || ||||| | || || || ||| | Sbjct 392926 CGAACTGTTATAACACCTGATCCAACCATTAATATTGATGAACTGGGGGTACC--TTGGA 392869 Query 305108 --ATTGCTTTAAAACTAACATTTCCAGAGA 305135 |||||||| || || |||| |||||||| Sbjct 392868 GTATTGCTTTGAACCTTACATATCCAGAGA 392839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186334357188904