Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cucumis_20melo_20[refseq_20GCF_5F000313045.1_202012-10-05] 31,464 sequences; 374,928,489 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq23 102 1e-16 >seq23 Length=5684809 Score = 102 bits (112), Expect = 1e-16 Identities = 161/230 (70%), Gaps = 3/230 (1%) Strand=Plus/Minus Query 130028 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCC 130087 || ||||| || || || || || | ||| || ||||| || || ||||| | || Sbjct 1473429 TGAAGACCTTCATCTCGTGAAATCAATTCGTTTGAGAACGTCAATCCAGGCATTAACCCA 1473370 Query 130088 CGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACAC 130147 || || |||||||||||||| | || || || |||||||| || ||||| || || Sbjct 1473369 CGTTTTTTCAACCAGAAAATAGAGCAGAAACTACCTGAGAAGAAAATTCCCTCGACGCAA 1473310 Query 130148 GCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAACCACTTCATCGCC 130207 || || || || | ||||||||||| || | | | |||||| |||||||| |||| Sbjct 1473309 GCAAATGCCAAAATCCGCTCAGCAAATGA---GTCCGTGCTATCAATCCACTTCAACGCC 1473253 Query 130208 CACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAG 130257 || | ||||| |||| | ||| ||||| || | || || | ||| || Sbjct 1473252 CAATCGGCCTTCTTCTTCACACATGGGACAGTATCAATAGCATGAAACAG 1473203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618191969435840