Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cucumis_20sativus_20[refseq_20GCF_5F000004075.2_202014-10-27] 190 sequences; 195,669,205 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq2 82.4 6e-11 >seq2 Length=23174626 Score = 82.4 bits (90), Expect = 6e-11 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 19002 CAGTTTTACGTTGCAAACGGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATG 19061 ||||||||||||||||| || || ||||| || ||| | || ||| | || | || ||| Sbjct 12089964 CAGTTTTACGTTGCAAATGGGGAGTTATCATGTCAAATGTATCAGCGTTCTGCTGACATG 12089905 Query 19062 GGCCTTGGGGTACCGTTCAACATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCAT 19121 |||||||| || || || || ||||| ||| || ||||| || | ||| | || ||| Sbjct 12089904 GGCCTTGGTGTTCCATTTAATATTGCATCATACGCTCTTCTGACTTGCATGATTGCTCAT 12089845 Query 19122 GTT 19124 ||| Sbjct 12089844 GTT 12089842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399503074898550