Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cucumis_20sativus_20[refseq_20GCF_5F000004075.2_202014-10-27] 190 sequences; 195,669,205 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq2 100 2e-16 >seq2 Length=23174626 Score = 100 bits (110), Expect = 2e-16 Identities = 96/123 (78%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 20431 CAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATG 20490 || ||||||||||| ||| || || || |||||||||||||| || || ||||| ||| Sbjct 12089964 CAGTTTTACGTTGCAAATGGGGAGTTATCATGTCAAATGTATCAGCGTTCTGCTGACATG 12089905 Query 20491 GGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACAT 20550 || || |||||||| || ||||||||| || || || || || | |||||||| ||| Sbjct 12089904 GGCCTTGGTGTTCCATTTAATATTGCATCATACGCTCTTCTGACTTGCATGATTGCTCAT 12089845 Query 20551 GTT 20553 ||| Sbjct 12089844 GTT 12089842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399183075639550