Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cucumis_20sativus_20[refseq_20GCF_5F000004075.2_202014-10-27] 190 sequences; 195,669,205 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq3 89.7 1e-12 >seq3 Length=39782674 Score = 89.7 bits (98), Expect = 1e-12 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 101853 TCAAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCAATAACGATTTGGCGGAAC 101912 |||||||||||| | ||||| | || ||||| | |||| | || || || | Sbjct 22913201 TCAAGAAGAAGGCCGATTGGGCGTTGAAGTGGATTGACAGCACGGAGTCATTTGCTGAGC 22913260 Query 101913 TAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTT 101972 ||| | || |||||| ||||| ||||| ||||| ||| ||| || |||| Sbjct 22913261 GGATTTTGGCATTTGCTTGTGTTGAGGGAATTTTCTTCTCAGGTAGTTTCTGTTCTATTT 22913320 Query 101973 TCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTA 102032 ||||| | || || | || | ||||||| || || | ||| || ||||| ||||| | Sbjct 22913321 TCTGGTTGAAAAAACGTGGGTTAATGCCTGGACTAACATTCTCAAACGAGTTGATTTCAA 22913380 Query 102033 GGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGT 102071 | || |||||||||||| | || |||||||| || ||| Sbjct 22913381 GAGATGAAGGTCTTCATTGTGATTTTGCATGTTTGTTGT 22913419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989581590981450