Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cucumis_20sativus_20[refseq_20GCF_5F000004075.2_202014-10-27] 190 sequences; 195,669,205 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq1 86.0 6e-12 >seq1 Length=29149675 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || || | || ||||| | |||||| | || | || || | Sbjct 6811892 ATGCAAATCTTCGTTAAGACCCTCACAGGAAAGACCATCACCCTTGAGGTGGAGTCTTCC 6811833 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | || || || || || || |||||||| || || ||||| Sbjct 6811832 GACACCATCGACAACGTTAAGGCTAAAATCCAGGATAAGGAAGGGATTCCACCGGATCAG 6811773 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| || | || | || |||||| ||||| || |||| ||| | ||||| ||| Sbjct 6811772 CAACGATTGATCTTCGCCGGCAAGCAACTTGAGGATGGCCGAACTCTTGCAGACTACAAC 6811713 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || |||||||| ||| | || || ||||| || ||| | || || Sbjct 6811712 ATCCAGAAAGAATCAACTCTTCACCTTGTCCTAAGGCTTCGTGGTGG 6811666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478661263176800