Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cucumis_20sativus_20[refseq_20GCF_5F000004075.2_202014-10-27] 190 sequences; 195,669,205 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq3 125 9e-24 >seq3 Length=39782674 Score = 125 bits (138), Expect = 9e-24 Identities = 184/260 (71%), Gaps = 3/260 (1%) Strand=Plus/Minus Query 126059 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCC 126118 || ||||| || || | || || | || || ||||| ||||| ||||| | || Sbjct 22913396 TGAAGACCTTCATCTCTTGAAATCAACTCGTTTGAGAATGTTAGTCCAGGCATTAACCCA 22913337 Query 126119 CGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACAC 126178 || || |||||||||||||| | ||| || ||| |||||||| |||||||| ||||| Sbjct 22913336 CGTTTTTTCAACCAGAAAATAGAACAGAAACTACCTGAGAAGAAAATTCCCTCAACACAA 22913277 Query 126179 GCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAACCACTTCATCGCC 126238 || || || || | ||||||||||| || | | | |||||| |||||||| |||| Sbjct 22913276 GCAAATGCCAAAATCCGCTCAGCAAATGA---CTCCGTGCTGTCAATCCACTTCAACGCC 22913220 Query 126239 CACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTTT 126298 || | ||||| |||| || ||| ||||| || | || || | ||| | ||||| Sbjct 22913219 CAATCGGCCTTCTTCTTGACACAGGGGACAGTATCAATAGCATGAAACAAGCGATTCTTC 22913160 Query 126299 TCTGATGGATCTTTGATGTA 126318 || | |||||||||||| Sbjct 22913159 TCATTCGAATCTTTGATGTA 22913140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597352181285200