Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cucumis_20sativus_20[refseq_20GCF_5F000004075.2_202014-10-27] 190 sequences; 195,669,205 total letters Query= NC_023549.1 Length=56789 Score E Sequences producing significant alignments: (Bits) Value seq190 82.4 3e-11 >seq190 Length=155293 Score = 82.4 bits (90), Expect = 3e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 50111 TTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAAC 50170 |||||||| | ||||||||||||| | | || ||| ||||||||| |||||||||| | | Sbjct 38855 TTGCGGAGACAGGATTTGAACCCGTGACTTCAAGGTTATGAGCCTTGCGAGCTACCAAGC 38914 Query 50171 TGCTCTACTCCGC 50183 |||||||| |||| Sbjct 38915 TGCTCTACCCCGC 38927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 181602790257780