Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cucumis_20sativus_20[refseq_20GCF_5F000004075.2_202014-10-27] 190 sequences; 195,669,205 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq6 86.0 6e-12 >seq6 Length=29076228 Score = 86.0 bits (94), Expect = 6e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || ||||| |||||| || ||||| ||| ||||| || || || | Sbjct 26767827 GACTCCTTCTGGATGTTATAGTCGGCCAAAGTACGGCCATCCTCGAGTTGCTTTCCAGCG 26767886 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| ||||||||||| |||||||| ||||| ||||| || || || || | Sbjct 26767887 AAGATAAGACGCTGTTGGTCTGGAGGAATGCCCTCTTTGTCCTGGATCTTGGCCTTTACG 26767946 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | || ||| || || | || | || || || ||||| ||||| Sbjct 26767947 TTGTCGATGGTGTCAGACGACTCAACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTTTTC 26768006 Query 132110 ATGAAAATCTGCATG 132124 | ||||||||||||| Sbjct 26768007 ACGAAAATCTGCATG 26768021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476610068048400